mRNA_8403 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A835YVR5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVR5_9STRA) HSP 1 Score: 1039 bits (2686), Expect = 0.000e+0 Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1 Query: 1 MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKGRRTKRNLKLPQPGEGLVDAGTAADVQVEV 1545 MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKGRRTKRNLKLPQPGEGLVDAGTAADVQVEV Sbjct: 1 MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKGRRTKRNLKLPQPGEGLVDAGTAADVQVEV 515
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A835Z8G3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G3_9STRA) HSP 1 Score: 416 bits (1069), Expect = 1.850e-135 Identity = 256/628 (40.76%), Postives = 321/628 (51.11%), Query Frame = 1 Query: 1 MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGS---------------------------------------------GDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXI-----------------------------------FDVANEMLHNAWY----------------------IDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRAT-----------------------------------SYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKI-----KGGA--VKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKC 1452 M DL+ DDF++ CGM+ + A+ D+VRRR +V +G G TAKITM+KHEFPFG AM DC+ +DNC F +++FN IV ETG KW DEEP GD TG+ G+ E +++L +RAH +WE++ +QDWVKNLPRDGS SLQ+AIW R++ Y +RY + XXXXXXXXXXXXXXX FDV NEMLH +Y DALPC G GPCMCD ACP+ M+V + DV++WMY+A Y P+ +ND+C HYCSKHFA++ +VKEAR I T MG QGHL T+CG DLM RFDHAVAA N GS S + +K+++TE D+QD D+++RADGYET YRAAY S GVAG+ WG+R+G EWRPDIAMV DY+LTLEPGQRIF +GLL W++S + + +G A V F AFPG YTI GC G FTVPVG+G V NW+C Sbjct: 30 MPADSDLWFDDFAVANCGMEAAH--SDAKIDEVRRRTTRVNIGKSG---------------------AETAKITMLKHEFPFGGAMWDDCVDSDNCKAFVKEHFNTIVAETGMKWWDEEPEDGDNTGTTXXXXXXXXXXXXXXXXXNQRPHHDACNGXXXXXXXXXXXXXXXXGEKYKEVARELGVELRAHSTYWEDNYKVQDWVKNLPRDGSRDSLQYAIWRRMQQYVERYGDXXXXXXXXXXXXXXXXDQQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAFDVNNEMLHGTFYKFAPPPVXXXXXXXXXXXXXXXXDALPCGGDGPCMCDLEDACPDGMDVDRDADVHTWMYKAMLQAASLDEYLSCRLRSXXXXXXXXXXXXXXXXXXMKYLLPDSRRFINDYCQMHYCSKHFALAKLVKEARDIPDVTDMGVQGHLTNSMTVCGLDLMARFDHAVAAINGGATDGSASLRDLYDAPRKMWVTEMDMQDKDVTRRADGYETFYRAAYGSPGVAGVMTWGWREGHEWRPDIAMVGEDYRLTLEPGQRIF--QGLLKGAWDASQDSTAVYPPDGEGDAPHVYFGAFPGTYTISAGGCTGSFTVPVGLGDYEVDAGNWEC 632
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836CIY0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY0_9STRA) HSP 1 Score: 392 bits (1008), Expect = 1.960e-126 Identity = 218/531 (41.05%), Postives = 286/531 (53.86%), Query Frame = 1 Query: 13 VDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRR---VLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGG-PCMCDYGPACPNDMNVPNNIDVYSWMYRATSYY-APNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQD-----------------TDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGA----------------VKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKGRRTKRNLKLPQ 1491 D+++DDF ++ C MD F V V LG+ +R V ET+ ++ A I M KH FP GAAM DC+ N C +FF+K+FN V E G+KW DE P + F G I A RAH +WE + +Q WVK+ P DGS SLQ A+W R+ Y RYK K +DV NEMLH ++ + LPCKGG PC+CDY ACP M IDV SWM++A Y P + ND+C +YC+ A+S++VK++ T MG Q HL+ +++CGF+LM RFDHA AA N + A GSLS I KLKKK+++TE DVQ+ +D + R GYE MYRAAYASAGV G+ WG+ Q +WRPDIAMVD+D+ +P +RI G GL H EWNS+ ++ G ++F AFPGEY ++V GC +FTVPVGMG ++V R WKC RR KR L P+ Sbjct: 40 ADVWLDDFMIQDCSMDRFS--------------VTVNLGAPAKRNSSVKETATLK--------------ANIIMQKHAFPLGAAMYYDCMNNPKCTSFFKKHFNWGVTEVGSKWGDEYPERNRFKDWGMEISAAITGTGAKYRAHSTYWEVNKRVQQWVKDAPLDGSSESLQAALWWRVNDYVSRYKGKAQN-----------------WDVNNEMLHGQFFANKLPCKGGAKPCICDYAAACPPGMGADRYIDVRSWMFKAMRYLLGPTAKLHTNDYCNMNYCTSSSALSNLVKQSLLYPELTGMGVQSHLSNAKSVCGFNLMARFDHATAALNGRPADGSLSPHDIFKLKKKMWVTEFDVQEIXXXXXXXXXXXXXXXESDHNLRGQGYEMMYRAAYASAGVEGVMAWGWSQPSQWRPDIAMVDNDFTTNWDPARRILGPTGLFHAEWNSTYYGKALETGRASPNKTPAKTQTQESHIQFSAFPGEYRLEVGGCTTQFTVPVGMGPLAVDARAWKC--RRGKRALAAPR 523
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836C9F8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F8_9STRA) HSP 1 Score: 387 bits (995), Expect = 4.090e-122 Identity = 218/543 (40.15%), Postives = 297/543 (54.70%), Query Frame = 1 Query: 16 DLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRV---------LETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXI--------------------FDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSK------------------RADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGA---------------VKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKG 1458 D++ID+F++R CGMD+FR AR +++R+R V + LG+ RR L+T +V M + FPFGAAM C + +CM FF+K+FN+ V E G KW + E +GD +G GD I+ A + L MRAH +W+ + + WV+ LP DGS SLQWA+W R++ Y RY++K XXXXXXXXX + +DV NEMLH ++ + LPC G GPC+CDYGPACP MNV +DV +WMY+A +Y P + + +ND+C+ CS + A+SS+VK+ R A MG Q H+N GR +CG+D++ +FDHA AA NFKN G L Q +++KL++K+++TE DV++ RA YE MYRAAYASAGV GI WG+ EW PD+ +VD L P Q I GLLH EWNS+ A + G V F AF G YT++V CR F VP G M++ R W C G Sbjct: 181 DIFIDNFTVRDCGMDEFRAETAARINKIRKRQVTLNLGAPFRRADGSLPQASSLKTDIV-------------------MNQQGFPFGAAMFEGCARSPDCMAFFKKHFNYAVAEYGMKWLEMERWRGDNSGVGDAIVNAIESLGVGMRAHSVYWDLEREVPAWVRALPTDGSWTSLQWALWQRMQDYVARYRDKALCSGCVXXXXXXXXXKTTLXXXXXXXXXXXXXXXXXADMYDVNNEMLHGNYFRERLPCNGQGPCICDYGPACPAAMNVDRWVDVRTWMYKAMAYLEPTKPLFINDWCMVMNCSPYEALSSLVKQGRAYTEAAGMGVQAHMNDGRKVCGWDVLAKFDHATAALNFKNPDGLLPQDELLKLRRKMWVTELDVKEXXXXXXXXXXXXXXXXXXXXXXWRAQAYEAMYRAAYASAGVDGIMTWGWTSLSEWGPDLWIVDTSLSLDTPPAQAILAPSGLLHGEWNSTRLATALSAGPALPNARYSVLAQESHVTFDAFAGAYTLRVGACRTDFEVPRGTTPMAIDARLWSCDG 704
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836CG56_9STRA (WSC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG56_9STRA) HSP 1 Score: 366 bits (940), Expect = 9.670e-112 Identity = 198/513 (38.60%), Postives = 283/513 (55.17%), Query Frame = 1 Query: 10 GVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPC-------KG--GGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQ--DTDLSK--RADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVK-----------------FKAFPGEYTIQVKGCRGRFTVPVGMGGMS--VTVRNWKC 1452 G D++IDD +++RCG+DDFR +RA T +VR R V + LG+ R + + + + A + M++H FP G AM+ C C++FFR++FN++VPE G KWH +EP G + D + A + L R H +WE + W+ +L DG EGSLQWAIW R+K + RY +DV NEMLH ++ LPC KG PCMCDY ACP+ M +P ++D+++WMY A +Y P + ND+C+T C K A+SS+VK+ + AAT MG+Q H+ G++ICGF+LM+RF HAVAA N GS S+ + K+K++ITE DVQ D+DL++ RADGYET YRAA+AS V G+ +W + + +P ++ + Y+L GQRI G GL+H EWNS+ A + GA F A PG Y +++ GC FTVP+G G + V W+C Sbjct: 187 GEDVWIDDVAVQRCGLDDFRAYSRAETARVRERSVTINLGAPRARTGDGAAPPAVSDLR--------ADVVMLRHAFPLGGAMRPSCPSEAGCLDFFREHFNYVVPEFGVKWHQQEPQSGVYNPLTDAMTAAVRHLGLGYRGHAVYWEVAAKQPAWLPDLAADGKEGSLQWAIWRRMKEFDLRYATIFDN-----------------YDVNNEMLHGNFFTSRLPCDTSVRDAKGVAASPCMCDYADACPDGMKLPKDVDIHTWMYSAMAYLIPGSRLHTNDYCMTEACGKSNALSSLVKQMLALPAATAMGSQAHVRTGKSICGFNLMDRFSHAVAAINGLPFDGSASREALAAAKRKMWITELDVQASDSDLNEEQRADGYETFYRAAFASPAVDGLLMWSWSD-IQGQPSSSLANAAYKLVYLAGQRILGAAGLVHGEWNSTQMAQPLAAGAAAPNDDNASSEPTGESHLLFTALPGTYELRIAGCATAFTVPLGRGSAAFDVAAAGWRC 673
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836CFE3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE3_9STRA) HSP 1 Score: 342 bits (878), Expect = 1.230e-106 Identity = 196/520 (37.69%), Postives = 277/520 (53.27%), Query Frame = 1 Query: 7 PGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKN------------------LPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMY--------RATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGY-RQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKCKGRRTKRNLKL 1485 PG ++++DD + RC ++DFRPV+ R D++R+R V++KLG G TA I+M KH +PFGAAM C + C++FFR+NFN + KW + EP G FT + + +L A K L +R H FW D IQ ++ + LPRDGSEGSLQ A++ R+ + RY + DV NEMLH +++ +D+ + + V ++ + +Y P++ LNDFC+ YC +SS+VK+++ A +G Q H+ G+ +CGFDL+ RFDHAVA AN K + L Q ++ L+KKI++TE D QDTDL RA+ YE+ YRAAYASAGV G+ +WG+ R +WRPD MVD ++ L LEPG+RIF GLLH EWNS+V I+ V F AFPG Y+++V C FTVP+G+GG++V V W C G K L L Sbjct: 192 PGAEVWVDDIIMSRCTLEDFRPVSERRVDEIRKRSVELKLGGDF-----------------GNGTDVTADISMTKHGYPFGAAMWDGCATDSACLDFFRQNFNFATAKESMKWKESEPAPGVFTDADEKVLNAVKDLDIGLRGHTVFW--DVPIQVFMNSRIDARERCAPALCALPQTLPRDGSEGSLQSAMYARLLRFVSRYGDVTAND-----------------DVDNEMLHGSFF-----------------KVVQDDVRMAVLLQVAPSVHGCERVIAAQQMAYLQPDKRRFLNDFCMMVYCGPDITLSSLVKQSKTFPDANGLGLQSHVTSGKEVCGFDLLARFDHAVAVANDKTSEVPLPQEDLIGLEKKIWVTEMDSQDTDLFWRANAYESFYRAAYASAGVDGMMVWGWARHPGQWRPDQEMVDENFNL-LEPGERIFAADGLLHSEWNSTVSDVSIEDTTVSFDAFPGSYSVEVGDCVADFTVPLGIGGLTVEVDAWSCAGGGRKIRLFL 657
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A835ZB14_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB14_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.200e-55 Identity = 110/284 (38.73%), Postives = 152/284 (53.52%), Query Frame = 1 Query: 634 DVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKAATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGD-EWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKC----KGRRTK 1470 DV NEMLH +++ ++ V N+DV +W Y+ +Y P + + LND+C+ YC +SS++K+A+ A +G Q H+ AGG + ++++++KI++TE D QDTDL R D YE+ YRAAYASAGV G+ +WG+ + D +WRPD MVD ++ LEPGQRIF D GLLH EWNS+ V F AFPG YT++V C G F VP+GMG M+ NWKC GRR K Sbjct: 248 DVDNEMLHGSFF---------------------KELGVAPNVDVQTWAYKMMAYLVPGKTLFLNDYCMLVYCGPDITLSSIIKQAKGFPEAKGIGLQSHV--------------------------AGG---KEGLLQMERKIWVTEMDSQDTDLHWRGDAYESFYRAAYASAGVGGMLVWGWARHDGQWRPDQEMVDENFNF-LEPGQRIFADDGLLHSEWNSTRHDVYFDDSKVYFDAFPGSYTVEVGDCVGHFKVPLGMGEMTAVADNWKCDDDGNGRRRK 480
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836CK16_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK16_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.500e-47 Identity = 139/502 (27.69%), Postives = 224/502 (44.62%), Query Frame = 1 Query: 1 MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAK---ITMVKHEFPFGAAMKS----DCLGNDNCMNFFRKNFNHIVPETG--AKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHCEFWE-NDSVIQDW-VKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDM-NVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFA-MSSMVKEARHIK-----AATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAAKIKGGAVKFKAFPGEYTIQVKGCRGRFTVPVGMGGMSVTVRNWKC 1452 + G + +DD ++ R ++DFRP + A D +R+R VQ+ +G G G A+ I + FP G+ + D + FF K FN+ E W +K F + ++ L P R H E +D+ W V P DG+ +Q + +R+ + +YK++ + NEML++ + LPC G GPC+CDY PACP+D+ V + V++W ++ + AP + +N++C+T +C + +SS VK +++ A T + QGH N G G D + + A+ K G+ ++I+E D+ D D +ADGYE RA +AS V+GI +WG+ QG +WR D +V+ G+R+FG GLL +W ++V A V + A G C+ +F VPVG +++T WKC Sbjct: 95 LTQGEAVCVDDVAVVRSTLEDFRPASDAAIDALRKRDVQLNIGQTG----------------------GVAEPVHIAQTRRAFPIGSVLNPGTMIDPVNGPQYKAFFSKYFNYCADEYAMVTAWETFINDKLPFDHT---VVNFCDTLDMPTRGHTIMGELSDTFNGGWDVFTTPMDGT---MQAQLHERVLLWMGQYKDRVVD-----------------IEPLNEMLNSRLWPKILPCDGVGPCICDYAPACPDDIFPVKEGVSVHAWAFKLAASLAPADRLVVNEYCVTGFCQPEQSNLSSFVKFVKNLNVETGGAVTGVADQGHYNLGANTAGPDTLLKL------ASIKEQLGADMD---------LWISEFDLDDPDPISKADGYEHALRAFFASPAVSGIVLWGFWQGAQWRKDAYLVNQ--------GERLFGINGLLTKQWMTTVDAVVGTPYTVYYGA-GGR-------CQAQFEVPVGAAPIAITPAGWKC 520
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A836CBC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBC9_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.210e-43 Identity = 138/493 (27.99%), Postives = 210/493 (42.60%), Query Frame = 1 Query: 7 PGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLETSVVRRRTRSKKGKKHGGTAKITMVKHEFPFGAAMKSDCLGND----NCMNFFRKNFNHIVPET---GAKWHDEEPNKGDFTGSGDFILEASKKLQYPMRAHC-----EFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALND----------------FCLT--HYCSKHFAMSSMVKEARHIK-----AATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQRIFGDKGLLHDEWNSSVKAA---KIKGGAVKFKAFPGEYTI 1371 PG + +DD + R +++FR + +R V +++G KG K +I K FP G A+ + L F +++FN+ E GA W G D +L+ L Y R H W ND W+ +PRDGS GS Q + RIK + Y+ + + ANEML++ +Y LPC GPCMCD+ PACP+++ I +WM + APN + +N+ +C++ + + ++ VK R + A + Q H RG T+ GFDL+ +FD +V A KN +I+E D+ D RA GYE RA AS + G+ IWG+ +G++WR D +VD D+ LT GQR+FG GLL W ++V + + +VKF+ F G+Y + Sbjct: 158 PGERVCVDDVGVFRSSIEEFRAYSDKLISANHKRDVVLRIG-------------------KGGKGREPVRIVQTKRAFPIGTAVNAASLDGTPDGKKYKAFIKEHFNYCADEQQLLGA-W-------GSKMWKTD-VLDFCDSLGYKTRGHAVAGELSDWSNDR----WLAQIPRDGSPGSTQAQFYGRIKLWMQHYRNRVVD-----------------IEAANEMLNSRFYEYVLPCGKDGPCMCDFPPACPDNLFPDKKIPTRAWMQKYAKSLAPNDRIVINEQXXXXXXXXXXXXXXXYCVSSNNCVPEQSTPATFVKFVRDLNSHADGAVKGVSDQAHYYRGGTVSGFDLLMKFD-SVKAQLGKNFS--------------FWISEFDIDDPFDDTRAAGYEQAMRAFLASRALDGVIIWGFWKGEQWRKDAYLVDLDWTLT-PAGQRLFGANGLLTKLWKTTVTTSVNTQSAPASVKFRGFHGQYRV 585
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Match: A0A022PV01_ERYGU (GH10 domain-containing protein (Fragment) n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PV01_ERYGU) HSP 1 Score: 114 bits (286), Expect = 4.750e-23 Identity = 90/358 (25.14%), Postives = 147/358 (41.06%), Query Frame = 1 Query: 202 GGTAKITMVKHEFPFGAAMKSDCLGNDNCMNFFRKNFNHIVPETGAKWHDEEPNKGDFT-GSGDFILEASKKLQYPMRAHCEFWENDSVIQDWVKNLPRDGSEGSLQWAIWDRIKWYTDRYKEKXXXXXXXXXXXXXXXXXXXIFDVANEMLHNAWYIDALPCKGGGPCMCDYGPACPNDMNVPNNIDVYSWMYRATSYYAPNRVMALNDFCLTHYCSKHFAMSSMVKEARHIKA----ATQMGAQGHLNRGRTICGFDLMERFDHAVAAANFKNAGGSLSQAQIMKLKKKIYITEHDVQDTDLSKRADGYETMYRAAYASAGVAGINIWGYRQGDEWRPDIAMVDHDYQLTLEPGQR 1260 G + KI +++ FPFG + + N++ ++FF KNFN V E KW+ EP KG+ D +L +R HC FWE +S +Q W++NL +D L A+ +R+ RY K +DV NEMLH ++Y D L D+ + M++ P + +ND+ + C + ++ ++A +G QGH+N V +A L + ++ L I+ TE DV + RAD E M R ++A V G+ +WG+ + R + +V+ + L E G+R Sbjct: 540 GTSVKIRQIQNTFPFGTCINRSNIDNEDIVDFFTKNFNWSVFENELKWYWTEPQKGNLNYKDADDLLNLCANHNIQLRGHCIFWEAESSVQSWIRNLNKD----DLTSAVENRLAGLLARYNGKFKH-----------------YDVNNEMLHGSFYQDRL------------------------GKDIRAHMFKTAYQLDPTATLFVNDYNIEDGCDARSSPEKYIEHILDLRAQGGPVGGIGVQGHIN-----------SPVGPVVRSA--------LDKLGVLGLP--IWFTELDVASDNEFVRADDLEVMLRESFAHPAVEGVVLWGFWELFMSRDNAYLVNAEGDLN-EAGKR 830 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349111 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8403 ID=mRNA_8403|Name=jgi.p|Trimin1|349111|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1641bp|location=Sequence derived from alignment at Contig_36:751049..757844+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGCCCCGGAGTGGATCTCTACATAGACGATTTTTCGCTCAGGAGATGback to top protein sequence of jgi.p|Trimin1|349111 >Trimin1|349111|estExt_Genemark1.C_Ctg_360073 ID=Trimin1|349111|estExt_Genemark1.C_Ctg_360073|Name=jgi.p|Trimin1|349111|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp MRPGVDLYIDDFSLRRCGMDDFRPVARARTDQVRRRIVQVKLGSKGRRVLback to top mRNA from alignment at Contig_36:751049..757844+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8403 ID=mRNA_8403|Name=jgi.p|Trimin1|349111|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6796bp|location=Sequence derived from alignment at Contig_36:751049..757844+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_36:751049..757844+ >mRNA_8403 ID=mRNA_8403|Name=jgi.p|Trimin1|349111|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1548bp|location=Sequence derived from alignment at Contig_36:751049..757844+ (Tribonema minus UTEX_B_3156 )back to top |