mRNA_8376 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349102
Unique Name	mRNA_8376
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349102 vs. uniprot
Match: A0A835Z3Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y4_9STRA)

HSP 1 Score: 487 bits (1254), Expect = 2.270e-173
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1

Query:    1 MGAAASLTEEQQLVVYNKMKTYLESKDVDDMPDAQRQLYEELRLKYKHFASDVKRVPKSSKVSVPLADIQRVRPWHFVEPGDAVECRPDGQAMWFAGSVTACNEDNDTYTVLMDGDESPETLKGDQIRKEDESNETWMVVQFPKWERPLQQGHKAWAWEGGGDAKAVLAYLNMAGDCELFESLLFLSSDSRGGGGRRGPTGSGGGSSNALTPESRAFDMASRIINNALARLPASILPSTLPEETQ 735
            MGAAASLTEEQQLVVYNKMKTYLESKDVDDMPDAQRQLYEELRLKYKHFASDVKRVPKSSKVSVPLADIQRVRPWHFVEPGDAVECRPDGQAMWFAGSVTACNEDNDTYTVLMDGDESPETLKGDQIRKEDESNETWMVVQFPKWERPLQQGHKAWAWEGGGDAKAVLAYLNMAGDCELFESLLFLSSDSRGGGGRRGPTGSGGGSSNALTPESRAFDMASRIINNALARLPASILPSTLPEETQ
Sbjct:    1 MGAAASLTEEQQLVVYNKMKTYLESKDVDDMPDAQRQLYEELRLKYKHFASDVKRVPKSSKVSVPLADIQRVRPWHFVEPGDAVECRPDGQAMWFAGSVTACNEDNDTYTVLMDGDESPETLKGDQIRKEDESNETWMVVQFPKWERPLQQGHKAWAWEGGGDAKAVLAYLNMAGDCELFESLLFLSSDSRGGGGRRGPTGSGGGSSNALTPESRAFDMASRIINNALARLPASILPSTLPEETQ 245

[Close]

BLAST of jgi.p|Trimin1|349102 vs. uniprot
Match: A0A835YUC8_9STRA (PB1 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.310e-12
Identity = 55/105 (52.38%), Postives = 60/105 (57.14%), Query Frame = 1

Query:  481 GGDAKAVLAYLNMAGDCELFESLLFLSSDSR----------------GGGGRRGPTGSGGGS---------SNALTPESRAFDMASRIINNALARLPASILPSTL 720
            GGDAKAVLA+LNMAGDCELF SLLF  SDSR                    RRG  G              S+ALTPESRAF+MA RIIN+A ARLP S+   TL
Sbjct: 1029 GGDAKAVLAFLNMAGDCELFVSLLFYRSDSRWVDHAEMQHSLALLRIASAARRGCRGXXXXXXXXXXXXXXSDALTPESRAFNMAGRIINDAFARLPVSMYDPTL 1133

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349102 vs. uniprot

BLAST of jgi.p|Trimin1|349102 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z3Y4_9STRA	2.270e-173	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YUC8_9STRA	1.310e-12	52.38	PB1 domain-containing protein (Fragment) n=1 Tax=T...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_36	contig	Contig_36:434982..448243 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349102\|estExt_Genemark1.C_Ctg_360040
Description	function. Source PGD
COG category	S
Max annot lvl	121069\|Pythiales
EggNOG OGs	2CKM0@1\|root,2SPM0@2759\|Eukaryota,1MH4Q@121069\|Pythiales
Evalue	0.000184
Seed ortholog	42099.EPrPV00000023301
Hectar predicted targeting category	other localisation
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-25_001020.1
TranscriptId	349424
Track	FilteredModels1
ProteinId	349102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349102	gene_8376	Tribonema minus UTEX_B_3156	gene	Contig_36 434982..448243 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349102	Trimin1\|349102\|estExt_Genemark1.C_Ctg_360040	Tribonema minus UTEX_B_3156	polypeptide	Contig_36 435096..448243 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8376_8	exon_8376_8	Tribonema minus UTEX_B_3156	exon	Contig_36 434982..435129 -
exon_8376_7	exon_8376_7	Tribonema minus UTEX_B_3156	exon	Contig_36 435564..435695 -
exon_8376_6	exon_8376_6	Tribonema minus UTEX_B_3156	exon	Contig_36 436060..436151 -
exon_8376_5	exon_8376_5	Tribonema minus UTEX_B_3156	exon	Contig_36 437031..437123 -
exon_8376_4	exon_8376_4	Tribonema minus UTEX_B_3156	exon	Contig_36 443283..443396 -
exon_8376_3	exon_8376_3	Tribonema minus UTEX_B_3156	exon	Contig_36 444206..444295 -
exon_8376_2	exon_8376_2	Tribonema minus UTEX_B_3156	exon	Contig_36 446605..446736 -
exon_8376_1	exon_8376_1	Tribonema minus UTEX_B_3156	exon	Contig_36 448193..448243 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8376	UTR3_8376	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_36 434982..435095 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8376	CDS_8376	Tribonema minus UTEX_B_3156	CDS	Contig_36 448193..448243 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_36:434982..448243-
coding sequence from alignment at Contig_36:434982..448243-

spliced messenger RNA

>mRNA_8376 ID=mRNA_8376|Name=jgi.p|Trimin1|349102|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=852bp|location=Sequence derived from alignment at Contig_36:434982..448243- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGGCGGCGGCTTCTCTTACGGAGGAGCAGCAGCTGGTGGTATACAA
TAAAATGAAGACGTACCTGGAAAGCAAGGATGTGGACGACATGCCTGATG
CACAACGGCAGCTGTATGAGGAGCTGCGGTTAAAGTACAAGCACTTTGCA
TCGGACGTGAAGCGGGTCCCAAAATCGAGCAAGGTGTCTGTACCACTGGC
GGACATACAGCGTGTGCGGCCTTGGCACTTTGTGGAGCCAGGCGACGCTG
TGGAGTGTCGACCAGATGGGCAGGCGATGTGGTTTGCTGGATCGGTAACT
GCGTGCAACGAGGACAATGACACCTATACAGTGCTCATGGATGGGGATGA
ATCCCCAGAAACGTTGAAGGGGGATCAGATTCGCAAGGAGGACGAGTCCA
ATGAAACCTGGATGGTGGTCCAGTTTCCTAAGTGGGAGCGTCCGCTGCAG
CAGGGGCACAAGGCCTGGGCATGGGAGGGGGGGGGGGACGCCAAAGCGGT
GCTCGCCTATCTGAACATGGCCGGCGACTGCGAGCTGTTCGAGTCACTCC
TGTTCCTCAGCTCGGACTCGAGAGGCGGCGGCGGCCGGCGTGGGCCCACT
GGCAGCGGCGGCGGCAGCAGCAACGCGCTCACACCGGAGAGTCGAGCCTT
CGACATGGCCAGCAGGATCATCAACAATGCCTTGGCCAGACTTCCCGCGT
CGATACTGCCCTCAACGCTGCCGGAGGAGACGCAGTAGCGGTGTGGCCCA
CTGGCTTGGCAAGGGGGCCCGGCACATGCGATCGCGATCTCCTGGCAGGG
CATCCCTTTCGTCGGAAATATGTACCTGTGATGTTGTGAGCGTGAAAGCC
AG

protein sequence of jgi.p|Trimin1|349102

>Trimin1|349102|estExt_Genemark1.C_Ctg_360040 ID=Trimin1|349102|estExt_Genemark1.C_Ctg_360040|Name=jgi.p|Trimin1|349102|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=246bp
MGAAASLTEEQQLVVYNKMKTYLESKDVDDMPDAQRQLYEELRLKYKHFA
SDVKRVPKSSKVSVPLADIQRVRPWHFVEPGDAVECRPDGQAMWFAGSVT
ACNEDNDTYTVLMDGDESPETLKGDQIRKEDESNETWMVVQFPKWERPLQ
QGHKAWAWEGGGDAKAVLAYLNMAGDCELFESLLFLSSDSRGGGGRRGPT
GSGGGSSNALTPESRAFDMASRIINNALARLPASILPSTLPEETQ*

mRNA from alignment at Contig_36:434982..448243-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8376 ID=mRNA_8376|Name=jgi.p|Trimin1|349102|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13262bp|location=Sequence derived from alignment at Contig_36:434982..448243- (Tribonema minus UTEX_B_3156 )
ATGGGGGCGGCGGCTTCTCTTACGGAGGAGCAGCAGCTGGTGGTATACAA
TGTGAGTGCTTCTACTGCTGTTGGTGATGTTACTAATGAGCTGTAGCAGC
ACATCAACAAGTCGGTAGGGAGCAGCTGCATTGACTGTCTTGCGTGATTG
ACGTTACTTGTAGCAGAAAGCGCACACAGCGATGCTTTGTACCTGGAAGT
TAGCGCTTGGACTGTTGATGTGGTTGAGTCAGCAACTGACTGACGTACAG
GACGACTTTACTGCCTTGAACAGTTCAGATGTTGGCACCATGGGGGGTGC
AGCACACCCAGTGTACTGGCGATTGGGGCTATTTTTCAAAGCGCAATGTG
GCAATTGACCGCAAGAGCCAACTTGCGCAGGTTAGCATGTACATATAAGC
TTGCCGGATCCTCCACAAGCATGCCATCGAAAGCTGAAGCCATTGCGCTA
TGAGGCACACATGGGTCCTTCAAGGTGACTGCACTGATCGCTGACTGATC
CCGTGTCAACAGTACTCAGTAACATCCTGAGGCCAGACTGCCAGACGAAA
ACAATGGCATTCATGTTAAGCGCAAACCGCAATGAAAACATATCAGTGCC
GGCTGGCAACAACGGCCCGCTTGTTCAATCAAAAACAATCCATGCTGTTG
CCATCATGATGAAGGACACAGGTGGTCTGGCCATGAAACATAATGGGAGT
GGTGTGTGACTTGATGACTACAACCAGATGGTATTGCTATAGCAGCTGTT
CTGTATGGCTTGCACGCACCAATGTCCATTGCAACATGATGGCTGGTTCG
TTGGCTGCAAGGGGTCAGTACACAAGATGTTTTCTTTTTTTCCAATAGGC
CAAGCAGGTGCCCTGTACAATGCACCTTTGCTAATGCAATTCGTAGCAAC
AACTTCTTTAAATGTATAAATGGCTGCATCTAATGCGAGGCATCACCCAC
TCTGACCCGCGCAGCTCAGCACTGTGCTCGACATCCTTTTCATCGGCCTG
CCAAAAGGTACATTGATGAGTCCAACCCAACTAAAGAACAGTAAGTATGC
AACAAGTACTAGAAATATGTAGCAGAGCAAGAGTACGGGTGGCGGATGTT
GATCGCTGGTCGTGGGAGGGGGGCCTTGATTGGGCTAGCAGAAGGTGTCC
TGCCTCTTGCCAAGGAGTTGTGCTGCAACAATCAGTGGAAGAATCACTTG
AAATACTATACTTCAAGTAGATGTCGCTGCTCATCACAAATTGAAATACT
TCGAAGTATGTTTGTTGAAGCCGAGTATTCCAAGATGATGGCAGAGCTCA
GTCAGCAACAGCAGTGTAGGTGTCGATTGCCAGTAGCATTTGGTGATTTG
CACCATAAACTGAGCTGCGCATGCGACATTTTGTCTCCTCGAGACTTCCT
GTTCAAGATGTCAGCTGACGCTTTCTCATTGTTTCTTTTCCTCTTTTCAA
GATATTCAGCAAGTAGTCACGAGCCTCACATCAAGTGTCCTGCCTCTGCC
TGAACAGAAAATGAAGACGTACCTGGAAAGCAAGGATGTGGACGACATGC
CTGATGCACAACGGCAGCTGTATGAGGAGCTGCGGTTAAAGTACAAGCAC
TTTGCATCGGACGTGAAGCGGGTCCCAAAATCGAGCAAGGTGCGTCAGAA
GATTGGTCAGAGATGGTTCATAGCCTGTAGACAAAATTGAGATTGAGATT
GCAGCGACTGCACCACCATCATCCCCTGTAGAATAAATTACCTCAGGAGC
AGGCAACAGTTGCATGTGAGTGTGTGTTCAGCAGCGGAAATGAGTTGTAT
ACGATGTGCAACAAGAAGCCTGCGTTTGGAGTCAGTTACTGCTTCATTCA
GGGCGGTGAAGCATCAAAACAATGCAGCGATCACACGGTGAAGTGCTGAG
CACTGCTGGTCACTATGATGTTGAGCACTGTGCTGCCGGACACAGAGCTG
TATGAGCACTGAAGGGATCCCTGCAACTCACATTGATTCAAGTGCTTCAT
TTGATGCATTGCGGGCACACATTGCGGGGGCGCATGCACAGCATCCAGCC
ACTGCACCAGCACCATCATCCTCCCATGAATGAACTTGCATCAGGAGTCT
GTTGAGCACTGTGATGTCAGACACAGTATGAGCACTGAAGGGAACCCTGC
GATTCACATCGATTGACGTTCTTCAATTGCATGAATTATGGCACGCCTTA
CGGGGGGGGGCGTGCACAACATTCAGGCTCTGATGCACAGAACCAGGTGA
CTAGTTTCAGCCATGTGACACCAGCCCTCTGCGAGGAACAAATGCAAGGC
ATCAAGTACGATACTGTACGGCGAACTGTCTGATTTTAGATTTGACCTGA
GAGGGCACCACGATCATGTACATGGCGGTGCGCTTGTAACAGACCTGCCT
TCTTTGGCATTTGTTGTAGACGGATGTGGTGTCTGCTGAGGCTGACACAT
ATCGCAGCGCACATGCGTCAAGCACTTGCCTCGTGCATCAGGCATTGCTG
CAGGCGTGGTTGTGTGTCAATTTGGTGATCTCGCAGCAAGCACTCATCGA
GCATACATCGCGTGGGTAGTTGAATTAAGTTGAAGCGTTCAAGTCATGAC
GATGCGCCACGTGCACCATCATGAGGACAGTATCGATGTCACTGACTTTG
GCGTTAGCACTTCAAGCTTATGCTTCGTGCCGTGTGGGAGCCCTGCTACG
TACTAGCGTGACTGGTCTGATTGTAACATGGTATCTGACCGACCGCTTGC
ATCTCTATTCCTGCTCCTCATGACAGGACACGAGGCAGAGTTACTTCTTG
AACTTGAATCAGAGTACCGCGCCAGAGCACCAAGGACTGCTTGTGGGGGA
CATTGTGCGAGTCAGAGATAGCCATGATGGTAAGGGTTAATCTGCCGGCA
GTGATTACAATCGCTGGTGCTTACAGACCTCATTTACATACCTAATGTCA
TACGCTGTGAAGTTCACTGGATGTTGTCATTGACAGTGTATCTTGTTCTT
GTCAGAAAATGCAAGGGACGAGCAAGTGCAGCACATGATTGCTTATCAAT
TTTCGGCATGCAACCCCAGGTTACTGTGAGCGTGTCACAAGCATGTACAG
GGAGCAGCATCGGTTTTTGTGACTCAATAAACGCTGCAAGCTTTGACTCG
GTGCTGTCATGCTTTCTGTACCGGAACCCGCAACGGCATATCTGGACTCA
CATACTTGCATGCATGCATGTCAACGATTGTGCGCAGCATGCAGTTCTTT
GATATCGACGGCACTATGGCGCAACCTGCGCATCAAGTCATCAAGTCATT
ACGTTTTGCAGACAGCATCTACCACTTGAAACTTTTAGGTGGAAAGGTTG
TATGGGATGCTTGTTGAATGGTCCCACATGAGATTAACCCCCCAAGTTCT
TTGCAATCGTTTGTCTGCTTTTCTTCAATAGCATCAACCCGTGGCATGTG
GTTTGAAGGCCTGCTGGTGGGCGTTGATCTGCAAGCAAATGCCTACACCG
TGGAGCTGGAAGATTCACAGGTGAGTGCCGACACAGCTGTAGGCGACTAG
CAGTGTATCTGTCCATTCACAATTTATGCTGGGGCGCAACACACTGTAAG
CGTCATGTACTTCAGAATGCATCTTTTTTTTTGCTGTCATAACCTGCACA
GTATGCTTGCCTGCCATTGCCATCTGCGCATTTTATGGAAGCTCCACGAT
GTGCAATTCTACACCAACAGGTACCTTCGAAGCGCCGTCAGCTGTAGTTA
TCCTGACTTGTGACGCAGTAAATGTATGCGAAAAACTTGCATGTTGTCCC
AGTCTTTGCAGGTTCAAATAGCTATGCTTTGTAAGGCCATGACCACAACA
AGCAAGTCACTCAGTGACTTGCGCTTTTCCCACCATCATGGTTGTGCGCA
TTACAGTGATTTGATGTCCGGTGATCTCTTGCATCTCTCGCCGCGCAGGT
GTCTGTACCACTGGCGGACATACAGCGTGTGCGGCCTTGGCACTTTGTGG
AGCCAGGCGACGCTGTGGAGTGTCGACCAGATGGGCAGGTATGTATTGCG
GTTGATGTACAGTACACAGTACACAGTACACTGTAGTACAGTACACAGCA
CTCCCGCCCATGACTTGCGTAGACCCTGAACATATCATGCACACATCATG
ACAACCTTTCTCACGATGAGCGAAACGCAGTGCGGTTTGGCTCTGTGGCA
TGAGCACAGTTCACTTTTCAAAAACCGCAGTTGAAGAAAGAGGCCCTTGA
CGTACCATTTTAGTTGATAAGTATTGTCACTCTTACTTGAGACCAGGCGC
GCTCGAGGTGCGTACATGAAAGCACGGAGTCAGCTTCCAAAGGAACGAAG
TGCTTCGCACATCTGCATACATATCTACATGTGTTCAGGCTCAGGCAGAC
ACAGACCGCTTCAGTGGTCTAAATAGAAGTACCGGTACTGATTGTCCCCA
TGCAGCACAGTACCTTTGATGAAGGGCTTAGCATCGGTCACATGGGCCTG
TCATGCTTTGAAGTATGCACAGTCTTGGGCTGGAGGACATCGATGCATTG
ATCAGATTAAGGCGTTGGAAGGTCATATGTTGTTGCGCGGTCACGGCATT
GCTCATTATACCTGTAGAACGCCACAGGACACTCTTTGAAGCTTGCTGAG
CGCTAGCTGTGTGGTCATGCTTACATGCTGTGGCGCATGCAAAAGTGATC
AAGTTCAAGTTCAAGACATGTGCACAGACAAAGACGTGTGGCAAGTGTTG
CTGCATTATCGCGTGCGCTTTCATGTCGACGTGGCACCCCAGCATTCACT
TGCAGATCACATGAGCAACGTTAACGACAACCCTTTGCCTGGTGCAGGCG
ATGTGGTTTGCTGGATCGGTAACTGCGTGCAACGAGGACAATGACACCTA
TACAGTGCTCATGGATGGGGATGAATCCCCAGAAACGTTGAAGGGGGATC
AGATTCGCAAGGTGCGTGCGGCATTCATTCAACGTGCTTTCATGTTCAGT
GGCCACTGACACATGTACATACATGTAACTCATAATTGGCAACATCTGTT
TCTAACGCGCTTTGGAGATTGCTTTCTGCGGTATGACTTACCTGCATGTA
TATGCTGTACTCTGATCTTGCCATGCATAGTAGTTAGAACAATTCGCCAC
TTCACGGATTCTTGCAAGGAATGCTGCTAGGCACAAATACCATATGCTTT
ATTTGTGGAAGAGCTGGTAGTTGCCAGGGCACGATATGGCAACCTCAAAC
ACGAAACAGTGCCTCACTCAAAATCTGTGTGCACGCCCTTTGTGCGGTAT
GGTGTACACACAGGTGCACAGCGTGCGCAGTCGTGCCGCACGGCGGTGGC
GCCGCGCCATGATGGTGCTGGCAGGCGTGCGCCGCATGAACTCTCACAGC
ACGCTGAACAAGGTAACTTCAACTGAGAGCTGTCACATGACATGTACCAG
TAGATTTCAATTTATTGACCACATATGTGTGTGTTCAGCCTTTGCACTGG
AAGTTTGTTTTGTTGAGGCAGCTGCACATAGCTCGCACGATCACGCCATG
GCCGTGCATCCGTGGACAAGCACTGGTAGGACTAGCCATTGTTGATGACC
ACTTGCTGGACGAAAGACGGGCATTTAGCAGGCATGCATATGAAAGACGG
GCATTCAGTAGACATCTGTGAAGGCTGGAAACCAAGGCGGTAATCTCTTA
CTTCAAGTTGTACAGACAGTAGATAAAGAAGTGGTGATTCGGTGCCGGAA
CATGAGAAGATGCGCATCCTGAGCATTGAGCACTCTGTATTCATGTTTAA
CGCTTGTACGTTAGTACTTGTCACCTGCCACACCAGCCAACGCACTCTAG
GCACACATGTAGTATTGTCACCTCCCTAGTGGGTGCTGAAGCATATGAAT
GTTTGCCGATGTCAGGCAGTATAAAATAACAGTCGACAGAACCAAGCGCT
TTAATTTGCACTGATCAGCCCAAATGCTCAAAGTTTTGCTGCGGCAAAGT
GTTGACTTCAATGGCAAGTACTTTGAGGTAGCCAACATGTACCTTGAGAC
GTCAAACCTGGGTGCTCTACCAGACCAGTAAGCTGGGTAAATTCAGCCTC
GCTCTCCCCTAAAATCAAATCCTCTCCAGGTAAGGCCTTGCATGCGCATG
ACAAAGAGTGAAGAAGACCTACTGCCTGTGCTGCACGTGCAGATGGCGAC
GCGCGAAAGCTGGGATTCCAGCTGCGATCTCGACATCACAACTTGAGCTG
CCAATGCACAAAGTCGGTGGCGGGCGTACCTTGAAAGGTATTGCAACATC
AGAAGCATTGACCAAATGCATGGCGCATCGTAGCACGACCTCTTCAAACC
GAGGAAGGCTTTGTTTACAAATGTTTGAATGATTGTGGCGTGAGCTGACT
GTAGTGACATCAATCCCTCAACTTCAATAACATTGACATGTAGAATTGTT
GCTTGTTTGGTGGCCCTCTGCTAAGGCATGCATCTTGCGCCGTATATTTT
GCAAGTGACGTGTCTGATGGATATTCAAGCAGTGGTTCAAAAAGGCTCCA
AGCACCAAATATGCTCCACAACAGCGATGCTGTGGTTTTCTTTGTTCACA
CGGGCTTCAAGACACAGCGTGTAATGCATTGAGTTATCCAGATGTACACG
CTCATCACTCGCTGCCGCTGCTAACTATGCAAGCATCAACTCCCATGTAC
TACAATACCGTATATGCCCGAGTAAACGCCCCCCCGGGCGTGCGGACCTG
GGATTTTGCACAGCACGCCCATGGGCGTATACAGGGGGGAGGGGGCCTGT
ACAAGGGAGGGGGGGGCTTAGCTGCTCCATTTTTAATTGCCAGCTAGCAG
GGGGGGCGTTTAAAAAAATTAAGGAGGGGGGGGGGCGTTTACTAGGGCCC
GGAACGCGTTTACAAGGTGCGAGCACAAAGTTGAGTAATGGCGATAACGG
ACATCTCTGATAATGGCAATGGCGGTGCTGGCGGAGCTGCTGCAGCTACG
TCAGCTCTTGTCCAGCAAGCATTGTTGCCTGTGTGACCATGCGTCGGCAA
TAGGGAAGCGACGCGATAATGAGTTCAACTTCGGCTTGAAGTTCGGCTTA
ATTCGGCTTTCGGGGGTGTTTTTTGCGAGGCCGCGTGCCAACCTGCAACC
ATTTTGGTTGCTAAGGGGCGTTTACAAGGGGGGGGTGGGCGTTGTTGCCC
ACTTTGCCCTGGCAAGCACGCCCATGGGCGTTTACGAGGGGGGGGGCCTG
TACAAGGGGGGGGGCGTTTACTGGGGCATATACACGGTAGTGGTATGTCT
CACCAACTGTCACTATTTGTCTTTGCTTTTGTCATTCCAGGTAAACGACG
TGGGTCAATGCTCCATTAAGCGTGACCTACTCCAAACTCTGGTCTAGGCA
CAAGTCGACGCATACAGCAGGGACAGGGGGGCAGCACCCATGCTTGCTGC
CTGGTGGCGCAGCAATGGCTGAACCAAAGCACTGCAACAGATTCTTTCAA
GTGCCATGGCAACTTGCTTGTGGAGTGTACCAATACTACTTTTACATACA
TCCAGCATGACATGATGTGCATGGTTGCCTTCGCCCGCGCTGTTTGCTCC
CATTTGATCTCCTTTGCACTGCGGAGCTCTCATTGCATAATGTTACTATG
CAATCTGGGTTGCGTCTTGGGACCAGCAAACAGCAGCAGCAAACAGTGCT
GAACATCTTACAATAAGGTTGCCTGTAGTTGAGTTGTGCGCTGTGATTTG
ATGGCCATGCGCAGCCATGCAAGATTTTGACTTGCTGCTGAGCACATTTG
CTCAGGGACGCTAGATGTGCAGATATTGATGGCGGTTCAACGACTGCTTG
TACAATGTGCTAGTAGGCGTGTATTCATCACCAGACTGTAGACATGATTT
GACAAGTGCCATCTGCATCGTGTCACACAAGCGGCGTCACGCTGTTAAAA
TGCCATGCTTCAACAAAACCTGACACGATCGATGTTGGCACCCTGTCAAC
AAGCAGAGTAAAGAAGCCTGTGGCTGATCAGGAATGGGGTAGAAATCCCA
TGAAAATCCAAGTGACATTCACAACACTGCTCAAATGCCTTGCACTGTTA
CTACGCTTGTGACTTGGGCAGGAACAGCTGTTGACCCACATGCGTCGCGA
AGTTGCGAACGAAACCGCTGACTTGCAGCCTTGTTGTACTCTAACCTTGC
GGCAAAACAGCAGCCTGGATCTGTGCGTGTTGGCACAACAATGATTACTT
CCCCCCACAACACACACACACTCTCAAGCTTATGCTTCTCTGCAGCACGA
GTTTGCTCGGTTTGCATCGCGTCCTGCCGACCATGCTGAACCCTTGCTAA
TTCAATCAGGAACATCTGCACACACACAACAACACACACAAGGGACGGCG
GCGTAAGCATTACAAGTACGGGAGTGACGTGAGTGTTTCAGTGACATTTG
ACACAAAGACTACAGAGGCCACATAATAATCAGCACTGCGCCTCTGAACA
TGAGTACCAATGCGCGCAGCAGCAGGTGAACAGCATTGTCAATAGGCTGG
CTAGCTCACACAGAAGTATGCTTGACAGCAAGTCAATGCAAACAAACGCA
GCGCGGTGCGTGTGCAGTAGCATGTCGAGCATGTGCATGAGCAGAACCAT
CAAAACGCGCATGACAGGTAATGCAGAGTGCGTCAATTACAGTTACATAC
CTTGAAAGGCGGGTGTACACAGAAACGCCCAGACGTGTGTACATGCGTGC
AGCAGCAGTGTGCCATTTGCACCTGCGCCTGTTCATCTGTGCTCGAAAAA
CAGTAAGGGGTTTACAGAAAGGAGAAACGCAGCCATGAGTGCACCGCAGC
AGACTCCAGGATGGCACTATCTCTGCATCAGCGCCAAGGGGCCGGGGGAG
CTCATGCAATGCGACAGCCATTGTTGCCAACTGCTCAGGTCAAAAGCCGG
GTGTCACCTGCAACCAGCTTGTGGGTCACTGCACTTAGAGACGCAGCGCA
TGACTGACTGTACTGTACTTGACAACGTGTGTGGTGGTACTTGTTCACAT
AGCCAGGCACGCAGCAGCTGGCAGCTTAACAACAAACTCATCAGCTCGGC
CTTGAGCCTGCAGACGCGCACGCAATGCTGCAGCCAATGCAGACTACTAT
GTACATGTGCAGGTAGTCGCACAAGCTAATGATGTAACCGGTGCAACCAG
TCTGAATAGCACCCCGCGCACCCCTATTACTCACCTGTACGAAGCGGTTC
TTTGGATGCGTCTATGGCCATCTTGCGCTCATCTGGTAGATAGATCGGCA
CTCACTCCCAACCGAGTCACCTGCGAGTAGGTAGCATGCATACGTCAGTA
GCATGCATAAGATTGCCGCCAGCAGCCGTAGTCGTTGTGGCCGACTGACA
TGAGTACTTGGCAATGCCATGCACCTTGCGCCACTGTGAGCAGTGAAGCC
GACTTTTTACCTGGTGTTGATGGTCCAGACAACTGGACTCCATGCCGCAT
CATCTCGTGGTGTGAACCTGTCAACCTCCCTTCCCCCTCAATAGGGGAAG
GGAGGGGGCATGCGGAATGCAAAAGAATGCAGGCATACCATGAGCACATC
AGTAGAGAGCAGCACTGCAAAGGCAAGCAGCATGCCATTAACACCTGTTA
CCGCATCAAACTCTATGTTGGAGCATGAGAGCGTGTCTCAACGCCATGTG
CCTAAATGACACAGCCAGTGCCACCTATGAACAGCCTGCGAGTCAACCGC
AATGAGGGGGTGCAGCGCATCTGAATCGTGAGGCATTTCACCACTCGGCC
AAGAGACTAAGAAGCCGGGGGCGACTTACAGGCAACCAACTCACGGTGAG
TCAGCTCCAAGTTTGCGTAGCGCGCAGAACGCAGCTGCCACTCAAAACCC
CTCACACCCTGAACGTACACTGACCAGCGACCTGTACCTTACCAGGTACA
GTCCACATCGCAAACTGAACAGCTTTCGGAAGGGAAAAGCCAGGTGACAC
CAGACACAATGACTGCAAGCGAGCTGCAATGGCGGGATAGCGCATCGTCA
CCAACTGGAGTGAGAGCCTGTTGAGGGGCTTTTGCCCCACCCAGCTTGTG
ACACATCGCAGAGGGAGGGCGCTTGGAGGCCGGCGACCAGCGTCAATGTG
AGCTGAATTAAAAGCGTGCCGGCGCGCGAACCGCTGCAGCCGATGCAAGC
TTCCACGCATGCGGACAAATGGTGGATGCCAATGTGCAGAGGCGCGCGAA
CCGCTGCAGCCCACGCAAATTCGCTCGCACCAGAGGTGCGCTTGCGCAAC
CTGACCAACGAGCAACCAACCTCGCGCGCTCGCACGGGATACCACTTTTG
GTACGTGTGTGCCAATCGCAGCGCGACGTCGCAGCCAATGCGCCTTCGCA
TGCTACAAAACACGCATACGAGCCGCCATAGGTACAGAGTCACGTATTGT
GGCTAGCCAAGATAAGCAAATGGCGATGGTGTTCATCACGTGCGCAGGTG
GTGTGTGTACTGTTTTGCTATGACGCTACAGCCTGATGCGCAGCCTAACC
CACCTGATCAAAAGCGCACGGTCGATGTCAAGCATCTGCGCATTGGCCAG
CTCCCTGAAGTGCCGCCTCGATGCGGCCAACTTGTCGTCTGTCCGCAGCT
TGAAGATGAGCGTGCTCCCGCACCCTGCCGAGCGGCAATGTCATGTGTGT
GTGTGTGAGTGATCGCTCCCCAGATCTGATGCAGCAGTGTTCAGCCGTGA
CGGACACACTACTTAGAGTGAAGCACCACCAGGTACGCGCCCGCAAAACA
CACACACACACACACACACACACACAGGGCACCAGATACAACACAGGACA
GGGTCCTGCGCATGGAGGCGTAACGCAAGTCAATCTGATCAACGCGCCTG
CGAAAGGAGGACCTAGCTTTTGACGGAAAACCGGATTTACAGGCAGCATC
GTCACCGTGCTGATGGAGGCAAGGTCACGTGCAGGAGCAAGCTCACTTGT
GGATGCCCTGCCACTGGCGGCGCACTTCATCCTTGCTCAGGCCCTCGGCA
AGGATTTTCCCTCGTACTTCACCCGCCTTTTTCCCCTGGTGCGAGCGATC
ATGCATTCGACACATGCAAGGAGGACGAGTCCAATGAAACCTGGATGGTG
GTCCAGTTTCCTAAGTGGGAGCGTCCGCTGCAGCAGGGGCACAAGGCCTG
GGCATGGGAGGGGGTGAGCCAGCAGACGGCCGAAGGTGAACCTGACGATA
CAGGGTGCTGTATCCGGACGTTCTGGAGGGCAGTGTTGTTAATGACGTAC
GTACGGGGGAGTACGTACGTACAAGGTAACAGGGGAGTACGTAGGATTTT
CAGAGTATTACCGTATTACCGGCTAACCCTAGCAGTAGGGTTAGCTAGGG
TTAGCCAACCCTAGCCCTAACCCTAACCCAACCTGCAGTGCTTTTACCCC
AATGGGTAACCCCATAGTCCTTACTTGTTCTGTCTTATGTCCTCTGATGC
TGGTGCTGGGACCGTTTATTGAGTGCAGACTGTGCTGCTAGCACGGTAGC
GCCTCATGCATTCACCTTGGCAGCCCTCTGTCCGCTGTGTGTGTTGCCGT
AGACCTGCTTGCTTTGCCTTGCCGGCAGCAGCTACACGTGCAGCCTGTCT
TGCGCTCAGCGACAGCGCGCCTCTGTGGCTGATGCCATTGCGTCGTCGAC
GCTTTTGCATCTTATCATGCGAGAGTCGTGCGAGAGCACGAGCACGATGT
GCACAAGAAACTGATGACCACCAGATGCGAAGTCGCAGAAATTGCGCTGC
CACTTGGAGCCCGCACGCACACGGCTGCACAGCGGCCTTTGTCAAAACAA
CCCGAGAGTTCAAATCCAGCGAAAAGTAATATTGTTGCGGGTAGAATGTG
CTTATTTGTCTAAACCTAGTTGTGGAAGTTCAACCCTGCTTAGTAACTTC
ATCATTATGATAACCTAGCTATCAACTTCAACATTATGCTAGCCCTAGCC
GGTAATACCGCACGGTAATAGGATTCCGGCTGTTACCGCGTACGCATGTA
CGTACATACCCAAAAGTGCCGGTATTAACAACGCTGCTGGAGGGGGGGGA
CGCCAAAGCGGTGCTCGCCTATCTGAACATGGCCGGCGACTGCGAGCTGT
TCGAGTCACTCCTGTTCCTCAGCTCGGACTCGAGGTGAGGCTACAGGCCA
TCCCATGTGTGCCTTGGACGTGCTGTAAGCATTTGCACTTGAATAATTGT
GTCCTGCAAGCAAGTGGCGCAAGGAACTGAGCAGCAACTTCCATTCTGTC
ACGAAGTATCAGCTATCGTGCCAACAGGAGCCACTTCAACACCAAAGCGC
TGGGGACCTCATGCACTGCATCCTGGCGCCTATTGCGGGACTGTCCAAAC
GCTCTGACGTGCGTTGAAGCCACATGAACACTCAAACAGCCCTTGCGTGC
TGCCTTCACCTGTGTGCCTTTGATGCAGGTGGGTGGACCATGCCGAGATG
CAACACAGCCTGGCTCTTCATTGCCAGTGCTGCCAGGCGTGGCTGCAGAG
GCGGCGGCGGCCGGCGTGGGCCCACTGGCAGCGGCGGCGGCAGCAGCAAC
GCGCTCACACCGGAGAGTCGAGCCTTCGACATGGCCAGCAGGATCATCAA
CAATGCCTTGGCCAGACTTCCCGCGTCGATGTATGACCCAACGCTGACTG
GCGCCAAGCGTGGCTTGCAGCGTTCGGCCTCTATGGAGGATGCTCATGCA
GGTGGAGGCAGTGCAAGCAAGCGTCGCCTCCAGAGTGCCCGTGGCACCGA
CACTGCTGCCGTCCACACGACGCCAGCTGATCGCCAGCTGCTCATTGCGA
CAGCCATGTTCAAGCACGCGCGGACTGCCCTCGAAGCTGCCGCTAATGAG
TGCATGAGGGCCACTACGGCAATGTATGGTTATGCGCAATGTATGGATAT
GCGAAGCAGGTGGGTACAGCGTTACTCAAAACTTCACTTGCATCATCTTC
TGGTGCTGCCATCGATCTGATTGCAATATTGATAGCACCGACACCGCTGC
AGTCCACCCGACGCCAGCTGATCGCCAGCTGCGCATTGCAACAGCCATGG
TCAAGCACGCGCAGACTGCCCTCAACGCTGCCGGAGGAGACGCAGTAGCG
GTGTGGCCCACTGGCTTGGCAAGGGGGCCCGGCACATGCGATCGCGATCT
CCTGGCAGGGCATCCCTTTCGTCGGAAATATGTACCTGTGATGTTGTGAG
CGTGAAAGCCAG

Coding sequence (CDS) from alignment at Contig_36:434982..448243-

>mRNA_8376 ID=mRNA_8376|Name=jgi.p|Trimin1|349102|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=738bp|location=Sequence derived from alignment at Contig_36:434982..448243- (Tribonema minus UTEX_B_3156 )
ATGGGGGCGGCGGCTTCTCTTACGGAGGAGCAGCAGCTGGTGGTATACAA
TAAAATGAAGACGTACCTGGAAAGCAAGGATGTGGACGACATGCCTGATG
CACAACGGCAGCTGTATGAGGAGCTGCGGTTAAAGTACAAGCACTTTGCA
TCGGACGTGAAGCGGGTCCCAAAATCGAGCAAGGTGTCTGTACCACTGGC
GGACATACAGCGTGTGCGGCCTTGGCACTTTGTGGAGCCAGGCGACGCTG
TGGAGTGTCGACCAGATGGGCAGGCGATGTGGTTTGCTGGATCGGTAACT
GCGTGCAACGAGGACAATGACACCTATACAGTGCTCATGGATGGGGATGA
ATCCCCAGAAACGTTGAAGGGGGATCAGATTCGCAAGGAGGACGAGTCCA
ATGAAACCTGGATGGTGGTCCAGTTTCCTAAGTGGGAGCGTCCGCTGCAG
CAGGGGCACAAGGCCTGGGCATGGGAGGGGGGGGGGGACGCCAAAGCGGT
GCTCGCCTATCTGAACATGGCCGGCGACTGCGAGCTGTTCGAGTCACTCC
TGTTCCTCAGCTCGGACTCGAGAGGCGGCGGCGGCCGGCGTGGGCCCACT
GGCAGCGGCGGCGGCAGCAGCAACGCGCTCACACCGGAGAGTCGAGCCTT
CGACATGGCCAGCAGGATCATCAACAATGCCTTGGCCAGACTTCCCGCGT
CGATACTGCCCTCAACGCTGCCGGAGGAGACGCAGTAG