mRNA_13026 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA) HSP 1 Score: 902 bits (2331), Expect = 0.000e+0 Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1
Query: 157 MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF 1497
MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF
Sbjct: 1 MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF 447
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI) HSP 1 Score: 759 bits (1959), Expect = 1.350e-273 Identity = 368/433 (84.99%), Postives = 406/433 (93.76%), Query Frame = 1
Query: 181 PADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWG 1479
P D GDRQVE+WK+KKLIKSLQKARGNGTSMISLVIPPGDQI+RVGKMLADEYGTA+NIKSRVN+LSVL AITSTQQRLKLY++VPPNGLVIYCGTI+TDEGKEKR+N+DFEPFK INTSLYLCDNKFHTEALDELLQDD+RFGFIVMDGNG LYGTLQGS R+V+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNC GLV+AGSA+FK+EL SDLFDPRLLK+V+K VDVSYGGE+GFNQAIELS E LG+VKLVQEKRLLQKYFDEI+QDTGKYCFMVDDTLKGLDLGAVETLIVW+NLDINR +RNN+T EEKVLHLTPEQE N++HF D ETG ELE DK +LVEWIANNYKNFGA LEF+TNRSQEGSQFC+GFGGIGG+LRW+VDFA++DE+ +E+ +D WG
Sbjct: 7 PEVDQGDRQVEIWKVKKLIKSLQKARGNGTSMISLVIPPGDQIARVGKMLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQGSTRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCAGLVLAGSAEFKNELQGSDLFDPRLLKNVIKMVDVSYGGEAGFNQAIELSAETLGSVKLVQEKRLLQKYFDEINQDTGKYCFMVDDTLKGLDLGAVETLIVWDNLDINRLEVRNNSTGEEKVLHLTPEQENNDTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNRSQEGSQFCKGFGGIGGILRWRVDFAEMDESNYEDVED-WG 438
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA) HSP 1 Score: 708 bits (1828), Expect = 1.300e-253 Identity = 347/419 (82.82%), Postives = 381/419 (90.93%), Query Frame = 1
Query: 190 DAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDE 1446
D+ D QVE+WK+KKLIKSLQ ARGNGTSMISL+IPP DQ+SRVGKML+DEYGTASNIKSRVNRLSVL AITSTQQRLKLYN+VPPNGLVIYCGT++TDEGKEK V DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD+RFGFIVMDGNGCLYGTLQG+ REV+HKFTVDLPKKHGRGGQSALRFARLR+EKRHNYVRKVAE A QFFI+DNK NC G+V+AGSADFKSEL TSD+FD RL + V+KTVDVSYGGE+GFNQAIELS E L NVKLVQEKRLLQ YFDEISQDTGKYCFMV+DTLK LDLGAVETLI++E L+ NR LRNN+TQEEKVL LTP+QE+N SHF D ETG ELETI+K+ LVEW ANNYK FG TLEFVTNRSQEGSQF RGFGGIGG LRW+VDFA++ E
Sbjct: 2 DSTDHQVEVWKVKKLIKSLQAARGNGTSMISLIIPPRDQVSRVGKMLSDEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRVPPNGLVIYCGTVVTDEGKEKSVIYDFEPFKPINTSLYLCDNKFHTEALNELLEDDERFGFIVMDGNGCLYGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQFFISDNKPNCSGIVLAGSADFKSELQTSDMFDNRLARVVLKTVDVSYGGENGFNQAIELSAETLANVKLVQEKRLLQNYFDEISQDTGKYCFMVEDTLKALDLGAVETLIIYEALETNRLVLRNNSTQEEKVLFLTPDQEQNASHFHDPETGVELETIEKMPLVEWFANNYKKFGTTLEFVTNRSQEGSQFVRGFGGIGGCLRWRVDFAEMAE 420
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: F0YK48_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK48_AURAN) HSP 1 Score: 692 bits (1785), Expect = 3.500e-247 Identity = 337/420 (80.24%), Postives = 382/420 (90.95%), Query Frame = 1
Query: 190 DAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEA 1449
DA D+QVE+WK+KKL+KSL ARGNGTSMISLVIPP DQISRV KMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLY++VP NGLV+YCGTIMTDEGKE+RVNIDFEPFKPINTSLYLCDNKFHTEALDELL+DDD+FGFI+MDGNG LYGTLQG++REV+HKF+VDLPKKHGRGGQSALRFARLR+EKRHNYVRKVAE A Q FI+ +K N GLV+AGSADFKSEL TSD+FD RL + V+KTVDVSYGGE GFNQAIELS E LG+VKLVQEKRLLQKYFDEISQDTGKYCFMV+DTLK L+LGAVETL+VWENLDI+R TLRN+ E+KVLHL+ EQ+ +E +F D +G ELE +K++LVE++ANNYK+FG TLEFVTNRSQEGSQFCRGFGGIGG+LRW+VDF +++ A
Sbjct: 11 DAQDKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQMFISADKPNVAGLVLAGSADFKSELHTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKYFDEISQDTGKYCFMVEDTLKALELGAVETLVVWENLDIDRLTLRNHAAGEDKVLHLSKEQQAHEEYFHDAASGVELEVTEKVSLVEFLANNYKSFGTTLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLEMEMA 430
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A812U0R4_SYMMI (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U0R4_SYMMI) HSP 1 Score: 686 bits (1770), Expect = 1.260e-244 Identity = 329/426 (77.23%), Postives = 382/426 (89.67%), Query Frame = 1
Query: 175 AAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAM 1452
++ D+ D+QVEMWK+KKLIKSLQ ARGNGTSMISL+IPP DQ+SR+ MLA+EYGTASNIKSRVNRLSVLGAITSTQQ+LKLYNKVPPNGLVIYCGTI+TD+GKEKRVNIDFEPF+ INTSLYLCDNKFHTEAL+ELL+DDD+FGFIVMDGNGCLYGTLQG+ REV+HKFTV+LPKKHGRGGQSALRFARLRLEKRHNYVRK AE A Q F+++NK N GLV+AGS DFK+EL+ SD FDPRL K V+K VDVSYG + GFNQAIELS E+L NVKLVQEK+LLQKYFDEI+QDTGKYCFMV DTL+ L++ +VET+IVWENL INR T++N +TQ+E VLHLTPEQE+N+SHF D TG ELE ++KI+LVEW+AN Y+ +GA LEFVT+RSQEGSQFC+GFGGIGGLLRW+VDF +L+ A+
Sbjct: 2 SSKTDEDQDKQVEMWKVKKLIKSLQAARGNGTSMISLIIPPRDQVSRISTMLANEYGTASNIKSRVNRLSVLGAITSTQQKLKLYNKVPPNGLVIYCGTILTDDGKEKRVNIDFEPFRAINTSLYLCDNKFHTEALNELLEDDDKFGFIVMDGNGCLYGTLQGNTREVLHKFTVELPKKHGRGGQSALRFARLRLEKRHNYVRKCAEMAVQLFLSENKPNVTGLVLAGSXDFKTELLQSDHFDPRLQKVVIKMVDVSYGMDPGFNQAIELSAESLANVKLVQEKKLLQKYFDEINQDTGKYCFMVADTLQALEMSSVETIIVWENLTINRITVKNTSTQQETVLHLTPEQEQNDSHFHDPVTGVELEVVEKISLVEWLANEYRKYGANLEFVTDRSQEGSQFCKGFGGIGGLLRWRVDFTELETAV 427
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: W7TWS4_9STRA (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWS4_9STRA) HSP 1 Score: 686 bits (1769), Expect = 1.990e-244 Identity = 341/457 (74.62%), Postives = 386/457 (84.46%), Query Frame = 1
Query: 172 SAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERN-----ESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF*GFTQGRYSD 1527
SA G+R V+ WK+KKLIKSLQ+A+GNGTSMISL+IPP DQISRV KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVPPNGLV+YCGTIMTDEGKE+R+ IDFEPFKPINTSLYLCDNKFHTEAL ELL+DDD+FGFI+MDGNG LYGTLQG+ R V+HKF+VDLPKKHGRGGQSA+RFARLR+E RHNYVRKVAE A +FITDNK N VGLVMAGSADFK+EL SDLFDPRLLK V+KTVDVSYGGE+GFNQAIEL+ E LG+VKLVQEK+LLQKYFDEISQDTGKYCFMVDDTLKGL+LGAVETLIVWE L+ RY +R+NTT EE+VLH+ EQ N +H RD +TG ELE +DKI+LVEW A+NY FG LEFVTNRSQEG+QFC+GFGG+GGLLRW+VDFA+ E + + G D D G T+ Y D
Sbjct: 3 SAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYAD----MGEDSDEEGGATEEDYED 455
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7R9U8Q0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Q0_9STRA) HSP 1 Score: 684 bits (1766), Expect = 2.530e-244 Identity = 336/431 (77.96%), Postives = 384/431 (89.10%), Query Frame = 1
Query: 187 DDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWG 1479
D+ +QVE+WK+KKLIKSL ARGNGTSMISLV+PPGDQISRV KML +EYGTASNIKSRVNRLSVLGAITSTQQRLKLYN+VPPNGLVIYCGTI+T+EGKEKRVNIDFEPFKPINTSLYLCDNKFHTE L +LL DD+RFGFIVMDGNGCLYGTLQG+ R+V+HKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRK AE A QFFITDNK N GLV+AGSADFK++L SDLFD RL + V+KTVDVSYGGESGFNQAIEL+ E LGNVKLVQEK++LQKYFDEI+QDTGKYCFMV+DTL LDLGAVETLIV+ENLD +R T+RN++T EEKVLHL Q++++SHF D TG ELE ID++ L+EW+ANNY+NFG +LEFVT+RSQEGSQF +GFGGIGG+LRW V FA+L + ++ DD++G
Sbjct: 6 DEEQQKQVELWKMKKLIKSLTAARGNGTSMISLVLPPGDQISRVAKMLQEEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNRVPPNGLVIYCGTIITEEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEPLHDLLADDERFGFIVMDGNGCLYGTLQGNVRDVMHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKCAEHAVQFFITDNKPNVRGLVLAGSADFKNDLYNSDLFDQRLARVVIKTVDVSYGGESGFNQAIELAAETLGNVKLVQEKKILQKYFDEINQDTGKYCFMVNDTLNALDLGAVETLIVYENLDCDRITVRNSSTGEEKVLHLDANQQQDDSHFFDNATGVELEIIDRMPLLEWLANNYRNFGTSLEFVTDRSQEGSQFVQGFGGIGGILRWSVQFAEL--GLDDDFDDDFG 434
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S3MEB0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB0_9STRA) HSP 1 Score: 683 bits (1762), Expect = 1.780e-243 Identity = 334/440 (75.91%), Postives = 378/440 (85.91%), Query Frame = 1
Query: 199 DRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMH-------EEDDDEWGNDMDGF 1497
DRQVEMWK+KKLIKSLQ ARGNGTSMISL+ PP DQ+SR+ KMLADEYGTASNIKSRVNRLSVLGAITSTQQ+LKLY ++P NGLVIYCGTI+TD+GKEKRVNIDFEPFKPINTSLYLCDNKFHTEAL+ELL+DDD FGFIVMDGNG LY +LQG+ R ++HKFTVDLPKKHGRGGQSALRFARLRLEKRHNYV KVAE A +FITDNKCN GL++AGSADFK L+ SD FDPRL K V++TVDVSYG E GFNQAIEL+ E L NVKLVQEKRLLQ+Y DEISQDTGKYCFMV DTL+ L++ +VETLIVWENL +NR +RN +T EE VLHLTP+QERN+SHF D TG +LE ID+ LVEW+ANNYK+FGA LEF+T+RSQEGSQFCRGFGGIGGLLRW+VDF +++ A ++DDDE D D F
Sbjct: 10 DRQVEMWKVKKLIKSLQAARGNGTSMISLITPPKDQVSRINKMLADEYGTASNIKSRVNRLSVLGAITSTQQKLKLYTRIPDNGLVIYCGTILTDDGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDTFGFIVMDGNGTLYASLQGNTRSILHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVTKVAELAANYFITDNKCNVTGLILAGSADFKEVLLNSDRFDPRLAKAVLRTVDVSYGMEPGFNQAIELATECLSNVKLVQEKRLLQRYMDEISQDTGKYCFMVQDTLQALEMSSVETLIVWENLAVNRLVVRNVSTSEESVLHLTPDQERNDSHFHDPVTGVQLEIIDRQTLVEWLANNYKSFGAKLEFITDRSQEGSQFCRGFGGIGGLLRWKVDFVEMEMAAELDHAGAADDDDDEDYFDGDAF 449
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S3NJC5_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJC5_9STRA) HSP 1 Score: 682 bits (1761), Expect = 2.730e-243 Identity = 335/432 (77.55%), Postives = 386/432 (89.35%), Query Frame = 1
Query: 184 ADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNT-TQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLD---EAMHEEDD 1467
A DA QVE+WK+KKL+KSL ARGNGTSMISLVIPP DQISR+ KMLADEYGTASNIKSRVNRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+TDEGKEK+VNIDFEPFKPINTSLYLCDNKFHTEAL+ELL+DDD+FGFI+MDGNG LYGTLQG++REV+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAE A QFFIT++K N GL++AGSADFKSEL S++FD RLLK V+KTVDVSYGGE+GFNQAIELS E LG+VKLVQEKRLLQ+YFDEISQDTGKYCFMV DTLKGL+LGA+ETLIVWENLD++R TLR+++ +K++HL EQ+ N+S+F+D ++G E E +D I+ VEW+ANNYK+FG +LEFVTNRSQEGSQFCRGFGGIGG+LRW+VDF +L+ EA DD
Sbjct: 6 AADAQAVQVEIWKVKKLVKSLTAARGNGTSMISLVIPPRDQISRITKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYSKVPTNGLVVYCGTILTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIIMDGNGALYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQFFITNDKPNVAGLILAGSADFKSELQNSEMFDNRLLKVVIKTVDVSYGGETGFNQAIELSAETLGSVKLVQEKRLLQRYFDEISQDTGKYCFMVSDTLKGLELGAIETLIVWENLDMDRITLRDSSGNTPDKIIHLNKEQQANDSYFKDEKSGIEYEIVDTISFVEWLANNYKSFGTSLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFMELEANEEAAEFADD 437
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A8J2SAF2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAF2_9STRA) HSP 1 Score: 677 bits (1748), Expect = 2.230e-241 Identity = 337/439 (76.77%), Postives = 382/439 (87.02%), Query Frame = 1
Query: 184 ADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITS--------------TQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYG---TLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEA 1449
ADDA D+QVE+WK+KKL+KSL ARGNGTSMISLVIPP DQISRV KMLADEYGTASNIKSRVNRLSVLGAITS TQQRLKLY++VPP+GLV+YCGTIMTDEGKE+RVNIDFEPFKPINTSLYLCDNKFHTEALDELL+DD++FGFI+MDGNG LYG TLQG++R+V+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAE A Q FIT +K N GLV+AGSADFKSEL TSD+FD RL + V+K VDVSYGGE GFNQAIELS E LG+VKLVQEKRLLQK+FDEISQDTGKYCFMV DTL+ L+LGAVETLIVWENLDI+R LRN+ E++VLHL+ EQ+ +E +F D +G ELE I+K+ LVEW+ANNYK+FG TLEF+TNRSQEGSQFCRGFGGIGG+LRW+VDF ++D A
Sbjct: 2 ADDAHDKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSEHHRKFKLYNDYAGTQQRLKLYSRVPPHGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDEKFGFIIMDGNGSLYGNTSTLQGNNRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQMFITADKPNVSGLVLAGSADFKSELQTSDMFDQRLARIVIKMVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKFFDEISQDTGKYCFMVVDTLRALELGAVETLIVWENLDIDRIKLRNHAASEDRVLHLSKEQQAHEHYFHDSVSGVELEEIEKLPLVEWLANNYKSFGTTLEFITNRSQEGSQFCRGFGGIGGILRWRVDFLEIDMA 440 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1555bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCAAAGCGTTCTTAGGCTAGTACAGCTTCCGCAGGCAGCGCTACAGACTGback to top protein sequence of jgi.p|Trimin1|6646 >Trimin1|6646|CE6645_84 ID=Trimin1|6646|CE6645_84|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=448bp MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQback to top mRNA from alignment at Contig_109:497383..502567- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5185bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_109:497383..502567- >mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1344bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )back to top |