Trimin1|352095|estExt_Genemark1.C_Ctg_1080034 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352095
Unique NameTrimin1|352095|estExt_Genemark1.C_Ctg_1080034
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length268
Homology
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A836CMQ3_9STRA (Eukaryotic porin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ3_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 9.880e-185
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query:    1 MASSADAAPALPPLQYADLGRPAVDLLSRDFVFTKRLLLRFTSDGRVVVDASLAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKLDVVNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTLTP 267
            MASSADAAPALPPLQYADLGRPAVDLLSRDFVFTKRLLLRFTSDGRVVVDASLAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKLDVVNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTLTP
Sbjct:    1 MASSADAAPALPPLQYADLGRPAVDLLSRDFVFTKRLLLRFTSDGRVVVDASLAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKLDVVNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTLTP 267          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A4S4LAH3_9AGAM (Uncharacterized protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LAH3_9AGAM)

HSP 1 Score: 66.6 bits (161), Expect = 8.340e-9
Identity = 56/213 (26.29%), Postives = 94/213 (44.13%), Query Frame = 0
Query:   53 LAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKLDVVNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEP--AINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSL 263
            L VD + T+A   + G ++   TT   +  +S +Y          L++  GPT    A+     + LG   Q N  L       ++   S G+G+    +    V  +A    S  + ++ H +S D+       Y+   P+   A+ VG+   L   +++KAK+NN  VLSL + Q +   V  TF   +DTK+++ A +     HK G S 
Sbjct:  435 LKVDVNATIAPGYDLGAEKQKPTT--KNAILSAVYKTPGLHTRANLNLFKGPTFTADAVLGHDGFLLGAEAQYNVSLG------QVTGYSTGVGFSAPEY---GVALLAANKLSHFTASYYHRVSRDVEAGGRAIYNAAKPQDGVALEVGTKTYLDQAAFIKAKINNNGVLSLGYTQGLRPGVKATFGLSLDTKNLSGANA-----HKVGTSF 631          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A7SWS9_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SWS9_NEMVE)

HSP 1 Score: 64.3 bits (155), Expect = 2.270e-8
Identity = 44/163 (26.99%), Postives = 77/163 (47.24%), Query Frame = 0
Query:  103 GPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            GPT  G+A+  +  W  G     +T         +L+  +  +GY    +Q  +    A K T +      H +S +L VAA ++++      +   G    +  D+ ++AKVNN + L LA+ Q++   +  T ++ IDTK++N        GHK G+SL +
Sbjct:  136 GPTVQGSAVVGYEGWHAGYQVAYDTSKS------KLIANNFSLGYRAKDFQIHSAVNDASKFTGS----IYHQISKNLEVAAQLNWATGSSNTSFQGGCKYDVDKDTTLRAKVNNNSHLGLAYTQRLRDGIKATVSSHIDTKNLNQG------GHKLGLSLEM 282          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A367KLT3_RHIST (Porin por1 n=16 Tax=Mucorineae TaxID=1344963 RepID=A0A367KLT3_RHIST)

HSP 1 Score: 63.9 bits (154), Expect = 3.060e-8
Identity = 75/292 (25.68%), Postives = 121/292 (41.44%), Query Frame = 0
Query:   13 PLQYADLGRPAVDLLSRDF-VFTKRLLLRFTSDGRVVVDASLAVDPSLTLAVSAEDGRQ----------EAGKTTPQSHGTI----SLLYANKLATLTTKLDVVNGPTAHGTALFR----------------------FGRWG-LGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEP-AINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            P+ + D+G+PA DLLS+D+ V   +L  + T+   V    +   D    + V   + +           EA  T+   +G +    +L    KL  +T+ L  VN   A   A ++                      FG+ G L GA      LD K     +   +  +GY    +   AV   A  + S  + +F H ++ DL  +    + +K     A+ VG+  KL S ++ KAK++N  VL LA+ Q +   V +   A IDT  +N         HK G++ TL
Sbjct:    4 PVAFNDIGKPAKDLLSKDYPVGGVKLEAKTTAPNGVTFKVNGQRDNKSGIIVGDLETKYADKKNGLTFTEAWTTSNHLNGKVELENNLAKGLKLELITSLLPSVNDKAAKINATYKKPNVHTVATLDVFKTNFSVNSVFGQNGFLAGAEVAYNVLDGK-----IGRYNAALGYTAPEY---AVAVHASNNLSQYAASFYHRVNSDLEASGKASWDSKGSNAVALEVGAKLKLDSTTFAKAKISNSGVLGLAYTQSLRPGVKVNLGASIDTTRLNEN------AHKLGLAFTL 281          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A068RIS3_9FUNG (Voltage-dependent ion-selective channel n=4 Tax=Mucorales TaxID=4827 RepID=A0A068RIS3_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 5.640e-8
Identity = 81/294 (27.55%), Postives = 127/294 (43.20%), Query Frame = 0
Query:   13 PLQYADLGRPAVDLLSRDF-VFTKRLLLRFTSDGRVVVDASLAVDPSLTLAVSAEDGRQ----------EAGKTTPQSHGTI----SLLYANKLATLTTKLDVVNGPTAHGTALFR----------------------FGRWGL--GGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVA--ASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            P+ + D+G+PA DLLS+D+ V   +L ++ T+   V    +   D    + V   + +           EA  T+   +G I    +L    KL  +T+ L  VN   A   A ++                       GR G   GG    N  LD K     +   +  +GY   G  A AV A+   + +  ++++ H ++PDL  +  AS D S      A+ VG+  KL S ++VK K++N  VL +A+ Q +   V +   A IDT  +N         HK G+SLTL
Sbjct:    4 PVAFNDIGKPAKDLLSKDYPVGGVKLEVKTTAPNGVTFKVNGQRDNKTGIIVGDLETKYADKAKGVTFTEAWTTSNHLNGKIELENNLAKGLKLELVTSLLPSVNEKGAKINATYKQPNIHTVATLDVLKTHFTVNSVAGRQGFLAGGEVSYNV-LDGK-----ISRYNAALGYSA-GEYAVAVHAL--NNLNNYAVSYYHKVNPDLEASGKASCDASGSNAV-ALEVGAKLKLDSSAFVKGKISNSGVLGVAYTQLLRPGVKVNLGASIDTSRLNEN------AHKLGLSLTL 281          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: T1JZI5_TETUR (Voltage-dependent anion-selective channel protein 3 n=2 Tax=Tetranychus urticae TaxID=32264 RepID=T1JZI5_TETUR)

HSP 1 Score: 60.5 bits (145), Expect = 4.720e-7
Identity = 70/252 (27.78%), Postives = 105/252 (41.67%), Query Frame = 0
Query:   20 GRPAVDLLSRDFVFTKRLLLR--FTSDGRVVVDASLAVDPSLTLAVSAEDGRQEAGKTTPQS---HGTISLLYANKLATLTTKLDVVNGP-TAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            G  A +L ++ F+    L ++  +T+D   V+   L VD      +         G  TP S    G I   Y      L   +D+ +G    HG  + RF  W LGGA     QL        +   +  +GY    +  +A  A    D   AS T    ++  L    S+ +S+        +G + KL SD+ +KAKVNN  ++ L   Q++   + LT  A ID K+ NS       GHK G+ L L
Sbjct:   51 GNIAANLETKHFLPDYGLTMKEKWTTDN--VLSTELTVDDQFAKGLKLGFN----GSFTPLSGKKSGVIKTSYKTDALHLNGDVDLDHGGFIVHGAGVVRFQSW-LGGA-----QLSFDPSKNAIKRNNIAVGYQTPEFNLTANLA----DLKEASSTVYQRVNDKLESGISLAWSSDKNSTQFGLGCIYKLDSDTSLKAKVNNSGIVGLGLTQRLRPGILLTLCASIDGKNFNSG------GHKLGMGLEL 280          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A2Z5XCV6_CYAPA (Non-selective channel of thylakoid membrane n=1 Tax=Cyanophora paradoxa TaxID=2762 RepID=A0A2Z5XCV6_CYAPA)

HSP 1 Score: 59.7 bits (143), Expect = 8.240e-7
Identity = 69/279 (24.73%), Postives = 114/279 (40.86%), Query Frame = 0
Query:   16 YADLGRPAVDLLSRDFVFTKRLLLRFTSDGRVVVDASLAVDPSLT----LAVSAEDGR-------QEAGKTTPQSHGTISLLYANKLATLTTKLDVVNGPTAH--------GTALFRFGRWGLGGACQV----------NTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            +A+LG+ A D+LS+D+ + K+L L+ T+   VV +A+ +  PS      LA+  + G          AGK +       +     KL       + + G  A          TA    G   +G +  V          N + D     P   D +   G  GD      VTA A       + +++H L+   SVA    +          +G L KL   SYV+AK++ + V S+A+ Q++   V    A Q++T+ ++         HK G +L +
Sbjct:    6 FAELGKSAKDILSKDYSYDKKLSLKSTTSSGVVFNAAGSSLPSGPIGGELAIKGKQGPAGISAKVDTAGKVSADLEVADAFTKGLKLVFRGLYPEPMVGTAAAEYRQDKFTATAFIDSGLK-VGSSVVVGVTDSISAGGNVEYDTNKGVPTKYDAAVSYGKAGD----FVVTAAARNKLGEYAASYVHHLNATTSVAGEFVHKKSDRSNTFTLGGLYKLDKTSYVRAKIDTEGVASVAYSQELRPKVTFVVAGQVNTRTLDKD------SHKLGFALVI 273          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A163LTJ5_ABSGL (Uncharacterized protein (Fragment) n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163LTJ5_ABSGL)

HSP 1 Score: 56.6 bits (135), Expect = 1.170e-6
Identity = 35/111 (31.53%), Postives = 57/111 (51.35%), Query Frame = 0
Query:  156 AVTAVAGKDTSTASLTFLHALSPDLSVAASVDY-SNKMPEPAINVGSLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            AV   A  + +  + +F H ++PDL  +    + + K    A+ VG+  KL S ++VKAK++N  VL +A+ Q +   V +   A +DT  +N         HK GV+ TL
Sbjct:   16 AVALHATNNLNAFAASFYHRVNPDLEASGKAAWDATKQNAVALEVGAKLKLDSTTFVKAKISNAGVLGVAYTQALRPGVKINLGAAVDTTRLNEN------AHKIGVAFTL 120          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A165P276_EXIGL (Voltage-dependent ion-selective channel n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165P276_EXIGL)

HSP 1 Score: 57.8 bits (138), Expect = 4.370e-6
Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = 0
Query:  156 AVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCKLQSD--SYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            AVT     + ST S ++ H +SPD+   A   + +K    A+++    K   D  ++VKA++NN  +LSLA+ Q +   V  +F   +DT+ +   P+P+   HK G +   
Sbjct:  190 AVTLHGLGNLSTFSASYYHRVSPDVEAGAKAVWDSKAHSSAVSLEVAAKAYIDKAAFVKARINNAGILSLAYTQNLRPGVKASFGLALDTQRLQD-PTPAGPAHKVGAAFVF 300          
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Match: A0A1E4TL58_9ASCO (Uncharacterized protein n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TL58_9ASCO)

HSP 1 Score: 57.0 bits (136), Expect = 7.270e-6
Identity = 71/293 (24.23%), Postives = 114/293 (38.91%), Query Frame = 0
Query:   16 YADLGRPAVDLLSRDFVFTKRLLLR----------FTSDGRVVVD----------------ASLAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKL---------------DVVNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGDGWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVGSLCK--LQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAPSPSSAGHKFGVSLTL 265
            Y+D+ +P  DLLSRDF       L           FT  G+  V                 + L +    T A   E   + +    P   G ++  +   L T T KL               D+++GP+  G A+   G  G     ++   + D GR   +   S  +GY    + A A+ A    + S  S ++ H ++P +   A   + +K     + +    K  L SDS+ KAK+NN  + + ++ Q +   V L     +DT+ +      S A HK G SLT 
Sbjct:    6 YSDIAKPTGDLLSRDFYAAAAANLEIKTKAPNGVAFTVKGKQPVQNGAISGTLETKYADKASGLTLTQGWTSANVLETKVELSEALVPGLKGELATSFRPSLGTKTAKLGLYFRQPAIHCRGFFDLLSGPSFVGDAV--VGHDGFLAGAELGYDVVD-GR---VTKYSAALGYAVPLYSA-AINA--DSNLSVFSASYFHKVNPSVDAGAKATWDSKSTAQGVKMEVAAKYALDSDSFTKAKINNNGLANFSYSQVLRPGVRLGLGLAVDTQRL------SEAAHKVGFSLTF 283          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352095 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A836CMQ3_9STRA9.880e-185100.00Eukaryotic porin-domain-containing protein n=1 Tax... [more]
A0A4S4LAH3_9AGAM8.340e-926.29Uncharacterized protein n=1 Tax=Phellinidium pouza... [more]
A7SWS9_NEMVE2.270e-826.99Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A367KLT3_RHIST3.060e-825.68Porin por1 n=16 Tax=Mucorineae TaxID=1344963 RepID... [more]
A0A068RIS3_9FUNG5.640e-827.55Voltage-dependent ion-selective channel n=4 Tax=Mu... [more]
T1JZI5_TETUR4.720e-727.78Voltage-dependent anion-selective channel protein ... [more]
A0A2Z5XCV6_CYAPA8.240e-724.73Non-selective channel of thylakoid membrane n=1 Ta... [more]
A0A163LTJ5_ABSGL1.170e-631.53Uncharacterized protein (Fragment) n=1 Tax=Absidia... [more]
A0A165P276_EXIGL4.370e-630.36Voltage-dependent ion-selective channel n=1 Tax=Ex... [more]
A0A1E4TL58_9ASCO7.270e-624.23Uncharacterized protein n=1 Tax=Tortispora caseino... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 77..260
e-value: 8.2E-20
score: 71.4
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 11..266
e-value: 1.3E-35
score: 125.1
IPR001925Porin, eukaryotic typePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 74..265
NoneNo IPR availablePANTHERPTHR11743:SF23GH26960P-RELATEDcoord: 74..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:393804..402791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352095mRNA_15568Tribonema minus UTEX_B_3156 mRNAContig_108 393804..402837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352095|estExt_Genemark1.C_Ctg_1080034 ID=Trimin1|352095|estExt_Genemark1.C_Ctg_1080034|Name=jgi.p|Trimin1|352095|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MASSADAAPALPPLQYADLGRPAVDLLSRDFVFTKRLLLRFTSDGRVVVD
ASLAVDPSLTLAVSAEDGRQEAGKTTPQSHGTISLLYANKLATLTTKLDV
VNGPTAHGTALFRFGRWGLGGACQVNTQLDDKGRGPELVDRSGGIGYFGD
GWQASAVTAVAGKDTSTASLTFLHALSPDLSVAASVDYSNKMPEPAINVG
SLCKLQSDSYVKAKVNNQAVLSLAFYQQMSKAVGLTFAAQIDTKHINSAP
SPSSAGHKFGVSLTLTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
IPR023614Porin_dom_sf
IPR001925Porin_Euk