Trimin1|352094|estExt_Genemark1.C_Ctg_1080029 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352094
Unique NameTrimin1|352094|estExt_Genemark1.C_Ctg_1080029
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length540
Homology
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A836CNQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ5_9STRA)

HSP 1 Score: 733 bits (1891), Expect = 2.620e-261
Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 0
Query:    1 MMVLWRHVCYAAAAALAADMCQALRLPGEATTASASSLKVNGHSANGRGANGYSQLDTXXXXXXXXXXXXXXXXXGNGALAVNGYSNXXXXXXXXXXXXANGLANGVYVKPQGLTLVVGNPSEKAVTDGEEVRRPKAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKGRGHSXXXXXXXXXXXXXXXXXXXXRGKSAGKQVSLXXXXXXXXXXXXXXXXXXXXASALTASRTTRTPAHKQRXXXXXXXXXXXXXXXXKATHAMKEKASSPLADQARQGAAERDGPAGSKGAKRDVMERSPRRVVRRANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMELQAAARLSEELQSSEEPALPPALAALDLEGGDLDGELNLANLKLDLLTKALGNLPLDFDSEDEDWLDDLEDDPDFEPEMRKKPAKKAKAADEQVVENQFIVSRQRSGRVQVRLY 539
            MMVLWRHVCYAAAAALAADMCQALRLPGEATTASASSLKVNGHSANGRGANGYSQLDTXXXXXXXXXXXXXXXXXGNGALAVNGYSNXXXXXXXXXXXXANGLANGVYVKPQGLTLVVGNPSEKAVTDGEEVRRPKAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKGRGHSXXXXXXXXXXXXXXXXXXXXRGKSAGKQVSLXXXXXXXXXXXXXXXXXXXXASALTASRTTRTPAHKQRXXXXXXXXXXXXXXXXKATHAMKEKASSPLADQARQGAAERDGPAGSKGAKRDVMERSPRRVVRRANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMELQAAARLSEELQSSEEPALPPALAALDLEGGDLDGELNLANLKLDLLTKALGNLPLDFDSEDEDWLDDLEDDPDFEPEMRKKPAKKAKAADEQVVENQFIVSRQRSGRVQVRLY
Sbjct:    1 MMVLWRHVCYAAAAALAADMCQALRLPGEATTASASSLKVNGHSANGRGANGYSQLDTXXXXXXXXXXXXXXXXXGNGALAVNGYSNXXXXXXXXXXXXANGLANGVYVKPQGLTLVVGNPSEKAVTDGEEVRRPKAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKGRGHSXXXXXXXXXXXXXXXXXXXXRGKSAGKQVSLXXXXXXXXXXXXXXXXXXXXASALTASRTTRTPAHKQRXXXXXXXXXXXXXXXXKATHAMKEKASSPLADQARQGAAERDGPAGSKGAKRDVMERSPRRVVRRANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMELQAAARLSEELQSSEEPALPPALAALDLEGGDLDGELNLANLKLDLLTKALGNLPLDFDSEDEDWLDDLEDDPDFEPEMRKKPAKKAKAADEQVVENQFIVSRQRSGRVQVRLY 539          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: D7FJE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE6_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 9.600e-19
Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 0
Query:  138 GKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTP--KRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKG 252
            G+ HT  SKAKISA+NKGK  WN G   S ETR +IAEG R A   ++ + A  LGMT+EEY+  KRR P  KRD       ++EET+ KISARLK KW+DP++R+ R   +P RKG
Sbjct:   33 GRPHTVASKAKISAANKGKKPWNVGVGHSEETRRKIAEGARNAARKRREKTAESLGMTLEEYEEMKRRKPAGKRDPT-----VTEETRKKISARLKAKWQDPSYRERRKQCMPNRKG 144          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A7S3UUP6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUP6_HETAK)

HSP 1 Score: 90.1 bits (222), Expect = 1.100e-15
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  135 PKAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGM-TVEEYDASKRRTPKRDTKGGQVK---LSEETKAKISARLKEKWKDPAFRKERLA 245
            P  GK HTAES+AKISA+NKGK  WNKGR  SPET ARI E TR A+  KK +KA ELG  ++E Y+   ++  +R  K G      LS+ETK KIS +LK +W DP +R  + A
Sbjct:   10 PAGGKPHTAESRAKISAANKGKTPWNKGRKHSPETIARIKERTRIAMLKKKEKKALELGYESLEAYEEVLQKEKERKKKAGGPNDRTLSQETKKKISEKLKARWADPVYRATQTA 124          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A7S2RAE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RAE1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.950e-14
Identity = 59/124 (47.58%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  141 HTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKR---------RTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKGRGH 255
            HT  SKAKISA+NKGK  WNKG+  S E +ARIAEG RR    +   K  +LG+T EE++A K+         R  ++  KGG    +E TKAKIS+ LKEKW +   +K R  N P RKG  H
Sbjct:    2 HTTASKAKISAANKGKVPWNKGKHRSEEVKARIAEGVRRKNRERFLAKLVDLGLTEEEFEAQKKEERRKKDAERLARKTAKGGYTPTAE-TKAKISSILKEKWANGEIKK-REYNGPYRKGFKH 123          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A4D9D1W4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.340e-13
Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 0
Query:  138 GKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKR-----RTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANI 247
            G+ HT ES+AKISA+NKGK  WNKG   S ET+ARI E T++A+ A+K  K A +G+T+EE++A K         +R      V  S + KA++S R++E+W+DPA+R++ L ++
Sbjct:  190 GRPHTPESRAKISAANKGKRPWNKGVGHSDETKARIRERTKQAMEARKRAKLAAMGLTLEEFEARKAAEAAAEKARRQEVKRNVTQSPDYKARLSQRMRERWQDPAYREKALKHL 304          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A7R9WD30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD30_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.810e-13
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 0
Query:  132 VRRPKAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPKRD--------TKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRK 251
            VR    G +HT  SKAKISA+NKGK  WNKG+  S E +ARIA G R+    +   K  ++GMT EEY+A+K+   +R         T+ G  + +EETKAKISA LKEKW     +K + +    RK
Sbjct:  180 VRTAAGGYSHTEASKAKISAANKGKVPWNKGKGRSEEVKARIAAGVRKRNRERFLAKLKDMGMTEEEYEANKKAERRRKDAERRARRTENGGYRPTEETKAKISAILKEKWAKGEVKKRKPSGGARRK 307          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: K0RCK9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RCK9_THAOC)

HSP 1 Score: 82.0 bits (201), Expect = 9.520e-13
Identity = 66/138 (47.83%), Postives = 84/138 (60.87%), Query Frame = 0
Query:  116 LVVGNPSEKAVTDGEEVRRPKA--GKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKR---------RTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKE 242
            LV GNP  +A T   +V RP A  G  HT ESKAKISA+NKGK AWNKG++ S ETRARIAEG R+    +   K AE G+T EE+   K+         R  ++  KGG    +EETK KIS  LKEK+ + A +++
Sbjct:  223 LVNGNPRAEAGT-ALDVPRPTANGGFTHTTESKAKISAANKGKTAWNKGKARSDETRARIAEGVRKRNRERFLAKLAEEGITEEEHHERKKAERXXXDAERRARKTAKGGYTP-TEETKRKISKVLKEKYANGAVKRK 358          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A7S2YBV4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBV4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.540e-10
Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 0
Query:  101 NGLANGVYVKPQGLTLVVGNPSEKAVTDGEEVRRP--KAGKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPK--------RDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTRKG 252
            NG  NG  +    L  V    +  A T   +V  P    G  HT  SKAKISA+NKGK  WNKGR+ SPE +ARIA G R     +  +K A++G+T EEY+  K+   +        R T+ G  + + ET+ KIS  LKEK+ +   +++ +     R+G
Sbjct:   23 NGAGNGTAMVGGVLADVESLSARLAATSRSDVPLPTENGGYTHTKASKAKISAANKGKTPWNKGRTRSPEEKARIAAGVRAKNRERFLQKLADMGLTEEEYEIQKKEERRKKDAERRARKTENGGFRPTAETRQKISKVLKEKYANGEIKRKPVDPSKVRRG 184          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A448ZQ35_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ35_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.820e-10
Identity = 58/130 (44.62%), Postives = 75/130 (57.69%), Query Frame = 0
Query:  115 TLVVGNPSEK-AVTDGEEVRRPKA--GKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKRRTPK--------RDTKGGQVKLSEETKAKISARLKEK 233
            T ++G   EK A  D  ++  P A  G +HT  S+AKISA+NKGK  WNKG++ SPE RARIA G R        +K  ++GMT EEY+A K+   +        R T  G  + +EETK KIS  LKEK
Sbjct:  119 TALLGKMKEKSAEKDNADLPHPTANGGYSHTKASRAKISAANKGKTPWNKGKARSPEVRARIAAGVRARNRQVFLKKLEDIGMTEEEYEAKKKEERRIKEAERRSRRTANGGYRPTEETKKKISRILKEK 248          
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Match: A0A6U6K8I3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K8I3_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.620e-10
Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = 0
Query:  138 GKAHTAESKAKISASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYDASKR---------RTPKRDTKGGQVKLSEETKAKISARLKEKW 234
            G +HT  SKAKISA+NKGK  WNKG+  S E + RIAEG R+    +   K A++G+T EEY+             R  +R  KGG  + +EETKAKISA LKEKW
Sbjct:  208 GYSHTKASKAKISAANKGKVPWNKGKGRSEEVKRRIAEGVRKRNRERFLAKLADMGVTEEEYEQXXXXXXXXXXXXRRARRTEKGG-YRPTEETKAKISAVLKEKW 312          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352094 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A836CNQ5_9STRA2.620e-261100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJE6_ECTSI9.600e-1952.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UUP6_HETAK1.100e-1552.17Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RAE1_9STRA7.950e-1447.58Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A4D9D1W4_9STRA2.340e-1344.35Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9WD30_9STRA7.810e-1344.53Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
K0RCK9_THAOC9.520e-1347.83Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2YBV4_9STRA1.540e-1037.04Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A448ZQ35_9STRA1.820e-1044.62Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6U6K8I3_9STRA2.620e-1049.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003611Nuclease associated modular domain 3SMARTSM00496seet_6coord: 314..330
e-value: 390.0
score: 4.4
coord: 281..297
e-value: 84.0
score: 8.6
coord: 161..177
e-value: 180.0
score: 6.5
coord: 251..267
e-value: 0.34
score: 20.0
coord: 214..230
e-value: 15.0
score: 13.2
coord: 137..153
e-value: 5.9
score: 15.8
IPR003611Nuclease associated modular domain 3PFAMPF07460NUMOD3coord: 138..174
e-value: 1.6E-10
score: 40.7
coord: 252..266
e-value: 0.018
score: 15.0
coord: 217..238
e-value: 0.013
score: 15.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..72
NoneNo IPR availablePANTHERPTHR34199:SF2NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSEDcoord: 311..388
coord: 20..235
NoneNo IPR availablePANTHERPTHR34199NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSEDcoord: 311..388
coord: 20..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:362711..371379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352094mRNA_15565Tribonema minus UTEX_B_3156 mRNAContig_108 362626..371379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352094|estExt_Genemark1.C_Ctg_1080029 ID=Trimin1|352094|estExt_Genemark1.C_Ctg_1080029|Name=jgi.p|Trimin1|352094|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=540bp
MMVLWRHVCYAAAAALAADMCQALRLPGEATTASASSLKVNGHSANGRGA
NGYSQLDTNGYSQLGANGRSSSSSSGNGALAVNGYSNGHTVNGNGANGYA
NGLANGVYVKPQGLTLVVGNPSEKAVTDGEEVRRPKAGKAHTAESKAKIS
ASNKGKAAWNKGRSMSPETRARIAEGTRRAVAAKKARKAAELGMTVEEYD
ASKRRTPKRDTKGGQVKLSEETKAKISARLKEKWKDPAFRKERLANIPTR
KGRGHSDETKAKISAKVKQLWQDPEYRGKSAGKQVSLETREKLSRVLKEK
WTDPVFRASALTASRTTRTPAHKQRISDAIRAKWADPEYREKATHAMKEK
ASSPLADQARQGAAERDGPAGSKGAKRDVMERSPRRVVRRANKKMLTEEE
EDQLILRKERAADRRAAVRQQQAMELQAAARLSEELQSSEEPALPPALAA
LDLEGGDLDGELNLANLKLDLLTKALGNLPLDFDSEDEDWLDDLEDDPDF
EPEMRKKPAKKAKAADEQVVENQFIVSRQRSGRVQVRLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3