Trimin1|352087|estExt_Genemark1.C_Ctg_1080014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352087
Unique NameTrimin1|352087|estExt_Genemark1.C_Ctg_1080014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1090
Homology
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A836CQM3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQM3_9STRA)

HSP 1 Score: 1908 bits (4942), Expect = 0.000e+0
Identity = 1089/1089 (100.00%), Postives = 1089/1089 (100.00%), Query Frame = 0
Query:    1 MIARTQTGGAQRGTWQGGSQGYQGGGXXXXXXXXXXXXXXXXQQRSTVEYDADEDDDEEMLALLDLDKIPDALLEERQALERDIPALHKRIAAARSQGGGDHALVPVSGNGRVPARASSDGGSGSFGGTAFSAPNNFNSASTQGASMSYQRPADSAIGAATAGGGNWELAMSGGXXXSATLNRSDSYRGGSYAGSFSNGGXXXXXXXXXXXXXXAFGAXXXXAVAXXXXXXXXXXXXXXXGGGVVDEDAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEGAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSAPMEAIDVDSGSDSDTWRKARPKKRTRVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEERSMPPFQVLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATKGIALKPFLAPPPPPDRGASAAGAGSDVWEDVQCSQGALEEVSAPLYPPASAAPVQGASPYFPAMGNAAPAAAAADAADDPFEAYRDLEL 1089
            MIARTQTGGAQRGTWQGGSQGYQGGGXXXXXXXXXXXXXXXXQQRSTVEYDADEDDDEEMLALLDLDKIPDALLEERQALERDIPALHKRIAAARSQGGGDHALVPVSGNGRVPARASSDGGSGSFGGTAFSAPNNFNSASTQGASMSYQRPADSAIGAATAGGGNWELAMSGGXXXSATLNRSDSYRGGSYAGSFSNGGXXXXXXXXXXXXXXAFGAXXXXAVAXXXXXXXXXXXXXXXGGGVVDEDAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEGAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSAPMEAIDVDSGSDSDTWRKARPKKRTRVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEERSMPPFQVLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATKGIALKPFLAPPPPPDRGASAAGAGSDVWEDVQCSQGALEEVSAPLYPPASAAPVQGASPYFPAMGNAAPAAAAADAADDPFEAYRDLEL
Sbjct:    1 MIARTQTGGAQRGTWQGGSQGYQGGGXXXXXXXXXXXXXXXXQQRSTVEYDADEDDDEEMLALLDLDKIPDALLEERQALERDIPALHKRIAAARSQGGGDHALVPVSGNGRVPARASSDGGSGSFGGTAFSAPNNFNSASTQGASMSYQRPADSAIGAATAGGGNWELAMSGGXXXSATLNRSDSYRGGSYAGSFSNGGXXXXXXXXXXXXXXAFGAXXXXAVAXXXXXXXXXXXXXXXGGGVVDEDAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEGAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSAPMEAIDVDSGSDSDTWRKARPKKRTRVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEERSMPPFQVLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATKGIALKPFLAPPPPPDRGASAAGAGSDVWEDVQCSQGALEEVSAPLYPPASAAPVQGASPYFPAMGNAAPAAAAADAADDPFEAYRDLEL 1089          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 572 bits (1473), Expect = 3.210e-178
Identity = 315/642 (49.07%), Postives = 403/642 (62.77%), Query Frame = 0
Query:  247 EDAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEW----EGAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQ---------------------AEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVS----EKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITK--------------------------VECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAG 833
            +  P+CEHG   V  TS +  + GR FY C   ++ GEQC FF+W D  G       G GG        +QLDI +++  +FGH +FR GQEEV+  AM+G+DVFVL+PTGGGKSLCYQLPA CCPGL VVFSPL+SLV DQ                     +E+  VMD+LY+L  +GGLKLLYITPEK  +S ++ + L+RL+ +GLLSRFVIDEAHC+SDWGHDFRPDYLKL  LR+D+P VPIMALTATA+  V DD      +RRL LR   +  +SFNRPNL+YEIR K   ++++IA+V+  +P +SGIVYCLS+++CE V+    +KL+   G    R RVDFYHA+R    +++EK R H EW+ GR  LICAT+AFGMGINK DVRYVIHHS+PK+LTH YQESGRAGRDG  ++CIVFF++ DK RL+NM+ +                          VECRRVL+L  FGE F R RC ATCDNC  +A  GCE    +C +Q   LLRL+  +V +  R TL+ L S+WRG+    L      A +L   G+    +K EA R+ QQMVL  +L+E + +TG  GA G  F A+Y   G      + + G         RG  KK G
Sbjct:  507 DGTPLCEHGERCVKLTSTSENNPGREFYKCPLPKNGGEQCGFFEWLDGEGNGGNRPSGGGGLPGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVAQMRATGVEAAYINSEQDYDSEVRVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDT-----IRRLQLRNPTVRTESFNRPNLKYEIRPKKAAVLDEIAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSETTGGHRGRFRVDFYHADR----TAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLPFQRRQSNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRGRCKATCDNC--IAMQGCEKETKDCTEQAGRLLRLSEVMVEREIRHTLVQLVSVWRGDSVKTLDQR--GARQLECAGSCKDMTKDEAIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCSPGRAGLQAQESQGEIRGKSGKERGRAKKTG 1135          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A7S4EMT8_9STRA (DNA helicase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMT8_9STRA)

HSP 1 Score: 509 bits (1312), Expect = 2.450e-157
Identity = 340/827 (41.11%), Postives = 459/827 (55.50%), Query Frame = 0
Query:  246 DEDAPMCE-HGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKD------------VGGEWEGAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQ---------------------AEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIR---VDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMI---------------------------TKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRR-LTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSAPMEAIDVDSGSDSDTWRKARPKKRTRVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEERSMPP-----FQVLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATKGI 1002
            D D P C  HGLP    T+ TS ++GR F+ CS     GE C+FFQWKD             G     AGG          L++ E+ R VFGH  FR GQE+V+  A++GRDVFVL+PTGGGKSLCYQLPA CCPGL VV SPLLSL+ DQ                     +E   +  +L +    GG+KLLY+TPEKL  S  ++ +LRRL+ +GL+SRF++DEAHCLSDWGHDFRPDY +L  LRRDYP VP+MALTATA +KV++DA     VR LG+R    ++ SFNRPNL YE+RKK  K+ + IA++V + P++SG++YCLS++ CE ++EKL   + +R K  R   V FYHA+  P+    E++  H +W++GR  ++CATVAFGMGI+K DVRYVIH+S+PKSLTH YQESGRAGRDG+ AEC++F+S+ DK  L+ MI                            +  CRR + L  FG+ F RA+CN TCDNC+A    G    E N   +   ++ L      Q R+ +T++ LA L+RG K   +    P    +  FGAGS F K + +++   M+    L E++VE   G      F + YV  G  AA L+     F V +       K          XXXXXXXXXXXXXXXXXXXXXXXX       F       I +D   D D             ++ +S+  +++S      L   H  +++  LK   + +A+E  M       + +L+       A   P T+D+LK     S  K+E  GA +V  I  +V  +G+
Sbjct:  436 DGDTPRCPGHGLPCRLLTANTSANSGREFFKCSL--PEGENCDFFQWKDGMEGNLNNNNFLEGSSTSSAGGD--------VLNMREENRRVFGHRSFRKGQEDVIEKAIQGRDVFVLMPTGGGKSLCYQLPAWCCPGLAVVVSPLLSLIQDQVQSLLKNGVKSVFFSSAQDYHSEQVDINRQLNETTAHGGVKLLYLTPEKLSHSNQMQSILRRLHNKGLISRFIVDEAHCLSDWGHDFRPDYNQLGRLRRDYPGVPLMALTATASEKVVNDA-----VRALGMRNEYRYQSSFNRPNLRYEVRKKDGKVTDAIADIVAQRPNDSGVIYCLSRKNCEQLAEKLQ--KKLREKGCRNVLVSFYHADLDPK----EREHRHKQWSVGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSLTHYYQESGRAGRDGEDAECVLFYSYKDKQVLEKMIRNGSDDKCNPSIRRKVDQLYKCVQYCENEFRCRRAMQLEFFGQKFDRAKCNQTCDNCKA----GRLPDERNMTAEAITIINLFNSASNQSRKGITMLQLAELYRGSKSKAITKSYPI-NVIEGFGAGSKFKKHDIDKITHGMIFQRILVENSVENKGG------FTSDYVALGEKAASLQRGSEKFIVEFPKKVTAPKARAEKQNSQEXXXXXXXXXXXXXXXXXXXXXXXXNKTEATDFGGLHFSEIGIDDSEDDDD-----------SLQDSSNVDTSNSRNMHSVLPHHHTNKIIEMLKTLVKRWADEEQMMGNHVFYWHILSGGEVKTIASNAPTTVDDLKAIGILSEKKLEEYGARIVKPIKMYVKNEGL 1219          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A7S4SBW1_9STRA (ATP-dependent DNA helicase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBW1_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 2.220e-146
Identity = 267/573 (46.60%), Postives = 349/573 (60.91%), Query Frame = 0
Query:  248 DAPMCE-HGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKD-----VGGEWEGAGGSGQQADQSQQL-DIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQ---------------------AEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAK---RIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKVE---------------------------CRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLA--TQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGS 760
            + P+C  H  P    T  T+ +AGR+FY CS     G+QC+FFQW D     +     G  G G     S +L DI+ + R  FGH  FR GQ++V+  AM+GRDVFVL+PTGGGKSLCYQLPA CCPG+ VV SPLLSL+ DQ                     +E   ++  L  +   GG+KLLYITPEKL  SG IK V+ +LY RG+LSRFV+DEAHCLSDWGHDFRPDY +L  LR DYP VP+MALTATA++KV+ DA     +R L +R   L++ SFNRPNL YE+RKK  K ++ +A+ + +  ++SG++YCLS+++CE VS+KL   E +R K    I V FYHAE  P    SE++R H  W  GR  ++CAT+AFGMGI+K DVRYV+H+S+PKS+TH YQESGRAGRDG +A+CI+F+S+ DK  L+ MI K                             CRR + L  FGE F R+ CN TCDNCR   QG    R  +     +E+++L   TQ    GR +TL+ L  L++G K+      +    KL  +G GS
Sbjct:  185 NTPLCPGHNAPCRTVTVSTANNAGRQFYKCSM--PEGKQCDFFQWADGMEGNLNDSMSGGMGGGDGVYGSGELKDIYAESRRKFGHNSFRPGQKKVIEKAMQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDA-----IRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETVSDKLQ--EKLREKGCSNIGVSFYHAELDP----SERQRRHHMWGSGRISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGDKADCILFYSYRDKKILEMMIRKTANNQNNQSTRRKIDQLYSCLRYCENEFLCRRTMQLEFFGEKFDRSLCNKTCDNCR---QGKIADRH-DLTDVAKEIIKLFLDTQAEKNGRGVTLVQLTDLFKGSKNKNSTKFI-ILSKLSGYGKGS 739          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: B8BWN4_THAPS (ATP-dependent DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN4_THAPS)

HSP 1 Score: 442 bits (1136), Expect = 2.180e-140
Identity = 250/535 (46.73%), Postives = 324/535 (60.56%), Query Frame = 0
Query:  341 MRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQA---------------------EIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLN---AHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKV----------------------------ECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKH-AGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMY 822
            M+GRDVFVL+PTGGGKSLCYQLPA CCPGL+V+ SPLLSL+ DQ                      E   ++DEL + P  GG+KLLYITPEKL  S  IK VL  L   G +SRFV+DEAHCLSDWGHDFRPDY +L  LRRDYP VP+MALTATA+KKV+ DA     +R LG+R    ++ SFNRPNL YE+R+K  K V+ IA+ +    ++SG++YCLS+++CE +S+KLN     +G R   +RV +YHAE        E+ + H  W++G   ++CAT+AFGMGI+K DVRYV+H+S+PKS+TH YQESGRAGRDG  A+CI+F+++ DK  L+ MI K                             ECRR L L  FGE F++ +CN TCDNCR     G    + +     RE+L+L   L  +GR +TL  LA LWRG K  A  K L+   E L  +G G   SK+E + +V  MV    ++E + ET  G      F A YV  G  AA ++S    F V +
Sbjct:    1 MKGRDVFVLMPTGGGKSLCYQLPAWCCPGLSVIISPLLSLIEDQVQSMTKLGVRSVFLNSAQSWEDEQRNIVDELRRTPIHGGIKLLYITPEKLAHSNMIKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPNVPLMALTATANKKVVSDA-----IRALGMRNEYSYRSSFNRPNLHYEVRRKDNKTVDTIADYIAERRNDSGVIYCLSRKDCETLSDKLNNKLREKGFRD--VRVSYYHAE----LDQRERHQRHHAWSLGHISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGGNADCILFYAYKDKKTLEMMIRKAAGHNQRSQATLRKIDHLYTCLRYCENTFECRRTLQLQFFGEMFEKHKCNKTCDNCRL----GLVEEKRDMTNSAREILQL---LDSRGRGVTLHQLAELWRGTKSKAHTKFLI--TENLNGYGKGKAVSKSETDALVHAMVFEGVIEELSEETTGG------FAADYVHPGKNAALVQSGRQQFFVSF 509          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: B7FSW6_PHATC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSW6_PHATC)

HSP 1 Score: 441 bits (1134), Expect = 2.710e-140
Identity = 234/513 (45.61%), Postives = 321/513 (62.57%), Query Frame = 0
Query:  321 RTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAE-----------IAPVMD----------ELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLN--AHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITK---------------------------VECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMH-LASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDE 782
            R  FGH  FR GQ+++++ A++G D+FVL+PTGGGKSLCYQLPA CCPGL VV SPLLSL+ DQ +           +A   D           L +    GG+KLLYITPEKL+ S  I+ ++RRL  + L+SRFV+DEAHCLSDWGHDFRPDY++LDS+RR+YP VP+MALTATA++KV++DA     +R LG++    ++ SFNR NL YE+RKK  + +E IA+ +   P ESG+VYCLS+++CE  S+KL   A +     RIR+ FYHA+  P     E+++ H EW+ G   ++CATVAFGMGI+K DVRYVIH+S+PKS+TH YQESGRAGRDG  A+CI+++ + DK  L+N+ITK                             CRR + L  FGE F+R +CN TCDNC+A    G      +  +  + ++ L T +  Q R  T +H +  L+RG K       +   +KLP +GAG  + K E +++V  ++    L E
Sbjct:    6 RRKFGHQEFRAGQQKIIKNAIQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNIIRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVNDA-----IRALGMKNEYRYQSSFNRSNLHYEVRKKDGQTLEVIADYIASRPKESGVVYCLSRKDCEKTSQKLQEIARQRPGCNRIRISFYHADLDPH----EREQRHREWSNGGVSVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDDADCILYYHYKDKKILENLITKSSKNPHSQTTRRQIDQLYGCVQYCEDLFRCRRTMQLEFFGEHFERGKCNKTCDNCKA----GRTPDRRDLTEDAKTIINLHTDVSKQKRNGTTLHQITELFRGSKSQAAVKFIDV-KKLPGYGAGRNYKKFEIDKIVHALIFERTLVE 504          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A4D9D6D9_9STRA (DNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D9_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 1.180e-139
Identity = 285/625 (45.60%), Postives = 372/625 (59.52%), Query Frame = 0
Query:  246 DEDAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNF-FQWKDVGGEWEGAGGSGQQAD----------QSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIA---------------------PVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKK------IVEDIAEVVLRY-PDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKK 831
            +E  P  + G P   R + T  +AGR+F+ C         C+  F+W D  G  E  G  G++A                D  +    +FGH  FR GQE+VV AA+  RDVFVL+PTGGGKSLCYQLPA   PG+TVVFSPLLSL+ DQ E                        +MD LY LP  G LKLLYITPEK  +S A+ + L+RL +RGLL+RFVIDEAHC+S WGHDFRPDYL L S+R  +P +PIMALTATA++++++DA     V+ L ++   +H+QSFNRPNL Y+IR KSK        +++IAE V +  P  SGIVYCLS+++ E ++  L         R+RV +YHA+  P+    E++RAH EW+ GR  +I ATVAFGMGINK DVRYVIH SLPKSLTH YQESGRAGRDG  AEC +++SF           KV+CRR L++ +FGE F  +RC  TCDNCR  A      + ++  +  + ++RL   +   G + TL  LASL RGE  A  +     A+K   FG GS  SK + ER+ QQMVL H+L E+ VE  NG      F A+YV+ G  A  L  ND +  ++ RT    ++K
Sbjct:  403 EEGDPCSKCGKPLEARVARTDTNAGRKFWKCF-------DCDADFRWDDEEG-GERGGDYGERASFPIHHELPVHNISMQDAAQCNHRIFGHRSFRLGQEKVVEAALSLRDVFVLMPTGGGKSLCYQLPACLTPGITVVFSPLLSLIQDQVEGLRENGVDAAQLTSHQDYETEGREIMDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQRLLEDA-----VKLLKMQSPYIHQQSFNRPNLTYDIRPKSKASPAFLGAIDEIAEYVKKKGPRSSGIVYCLSRKDTERIATAL-----AEKTRLRVGYYHADMPPK----ERERAHREWSQGRMPVIAATVAFGMGINKPDVRYVIHFSLPKSLTHYYQESGRAGRDGLPAECRMYYSF-----------KVDCRRTLIMQYFGEAFDPSRCKRTCDNCRNEAA----VQALDLTELAKNVIRLVDSMA--GMQFTLCQLASLVRGENLAWARKT--GADKEELFGCGSQHSKGDVERLTQQMVLQHFLAEEMVELANG------FPANYVQLGVEAEAL-MNDASRRLVLRTRDSKRRK 979          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A1E7EUD2_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD2_9STRA)

HSP 1 Score: 452 bits (1163), Expect = 2.860e-136
Identity = 305/839 (36.35%), Postives = 426/839 (50.77%), Query Frame = 0
Query:  247 EDAPMCE-HGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGE---WEG--------------------AGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQA---------------------EIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKR---IRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMIT-------------KVE--------------CRRVLLLGHFGEPFQRARCNATCDNCRA--LAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSAPMEAIDV-DSGSDSDTWRKARPKKRTRVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEER-----SMPPFQVLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATKGI 1002
            +  P+C  H  P    T+ TS + GR+F+ CS     G+ C+FFQWKD   E   W                      +GG+         LD++E+ + VFGH  FR GQ+ V+  A++G+DVFVL+PTGGGKSLCYQLPA CCPGL VV SPLLSL+ DQ                      E   +  +L Q    GG+KLLY+TPEKL  S  ++ +LRRLY +GL+SRFV+DEAHCLSDWGHDFRPDY +L  LR+DYP VP+MALTATA+KKV++DA     +  LG+                  +RKK  K+++ IA+++   P +SG++YCLS++ CE V+EKL     +R K+   + V +YHAE  PQ    E++R H +W+ GR  ++CATVAFGMGI+K DVRYVIH+S+PKS+TH YQESGRAGRDG  A+CI+F+S+ DK  L+ MI              K++              CRR + L  FGE F RA+CN TCDNC+A  LA      +E   +     L   A++       +T++ L  L+RG K   +      +  L  +GAGS + K E ER+  +M+    L E++VE   G      F + YV  G  A  L++    F V +      K  A                                             E I V DS  D D+            I  NS+  + ++++    L   H  +L+ +LK   + +A E      ++  + +L        A   P+T+ EL       +AKVE  GA +V  I ++VA +G+
Sbjct:  394 DGTPLCPGHSQPCRVFTANTSTNMGRQFFKCSL--PEGQNCDFFQWKDGDVEENNWNDXXXXXXXXXXXXXXXXXXXTSGGN--------ILDMYEENQRVFGHRTFRKGQQLVIEKAIQGKDVFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQSLTKYGVKSVFFSSHQDYQTEQVDINRQLNQTTAHGGVKLLYLTPEKLRHSNQMQSILRRLYNKGLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRKDYPGVPLMALTATANKKVVNDA-----IGALGM------------------LRKKDGKVIDAIADLIASRPKDSGVIYCLSRKNCEQVAEKLRGK--LREKKCGHVGVSYYHAELDPQ----ERERRHKQWSSGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDNADCILFYSYKDKQVLEKMIRSGNGGRYSPSIQRKIDQLYGCLNYCEDDFRCRRTMQLEFFGETFDRAKCNKTCDNCKAGRLADNRDMTKEAISIIN---LFNSASRKKRNTSGITMLQLTDLYRGSKSKAITKNYTTSG-LEGYGAGSKYKKDEVERITHKMIFDRILIENSVENTGG------FTSDYVSLGDAAPPLQNGSKRFFVEFPQ----KVVAAGKPDKQQKKATNKRSSSKNPSSRTAKKSKSLQKTEREDIGGLQFEEIGVGDSDDDDDS------------ILENSNVSANNTEKLQSVLPHHHTKKLVDQLKTLVQMWANEEQVMGNNVQYWNILTGEDIKTIASHAPITVGELTTLGILGQAKVEEYGARIVKPIKSYVANEGL 1167          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: A0A6H5L064_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L064_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 1.370e-133
Identity = 214/358 (59.78%), Postives = 268/358 (74.86%), Query Frame = 0
Query:  300 GAGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLK 657
            G GG        +QLDI +++  +FGH +FR GQEEV+  AM+G+DVFVL+PTGGGKSLCYQLPA CCPGL VVFSPL+SLV DQ  +  VMD+LY+L  +GGLKLLYITPEK  +S ++ + L+RL+ +GLLSRFVIDEAHC+SDWGHDFRPDYLKL  LR+D+P VPIMALTATA+  V DD      +RRL LR   +  +SFNRPNL+YEIR K   ++++IA+V+  +P +SGIV   +    + +SE    H G    R RVDFYHA+R    +++EK R H EW+ GR  LICAT+AFGMGINK DVRYVIHHS+PK+LTH YQESGRAGRDG  ++CIVFF++ DK RL+
Sbjct:   18 GGGGLPGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVRV--VMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDT-----IRRLQLRNPTVRTESFNRPNLKYEIRPKKAGVLDEIAKVMQSFPGQSGIV---ASGLLKKLSETTGGHRG----RFRVDFYHADR----TAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLE 357          
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Match: K0SNN9_THAOC (DNA helicase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNN9_THAOC)

HSP 1 Score: 446 bits (1146), Expect = 2.980e-133
Identity = 260/592 (43.92%), Postives = 344/592 (58.11%), Query Frame = 0
Query:  315 DIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAP---------------------VMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLN---AHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMG---------------------------INKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITKV---------------------------ECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQ--GRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRTSR 826
            ++F +L+T+FGH RFR GQ+EV+  AMRGRDVFVL+PTGGGKSLCYQLPA C PGL+VV SPLL+L+ DQ +                        ++ +L QL P GG+KLLY+TPEKL  SG I+ +++ L +R L+SRFV+DEAHCLSDWGHDFRPDY  L +LR DYP VPIMALTATA+++V+ D+     ++ LG+R   + + SFNRPNL YE+RKK  K ++ I E +     ESG++YCLSK++CE VS+KLN     +GIR   IRV FYHA+  P    +EK R H EW+ GR  ++CAT+AFGMG                           ++K DVR+V+H+S+PKS+TH YQESGRAGRDG  A+CI+F+S+ DK  L+ MI K                            ECRR L L  FGE F +  CN TCDNCRA      E R  N   + RE++ L   L  Q  GR +TL+ L  LWRG K       L  +  L ++GAG+ + + + +R+   MV    L+E   E+   G     F   YV  G  A  + +    F V +   +
Sbjct:  456 NVFSELKTMFGHDRFRPGQQEVIENAMRGRDVFVLLPTGGGKSLCYQLPAWCQPGLSVVISPLLALMEDQVQSMVRAGVESVFLNSTQSYEDEQQFIVQKLNQLTPHGGIKLLYVTPEKLTHSGMIRGIIQSLSQRNLVSRFVVDEAHCLSDWGHDFRPDYKNLRNLRHDYPTVPIMALTATANEQVVKDS-----MQVLGMRNAFVFRSSFNRPNLHYEVRKKDTKTIDTICEYIAERRGESGVIYCLSKKDCENVSQKLNNKLREKGIR--NIRVSFYHADVDP----AEKARRHNEWSSGRIAVLCATIAFGMGSKSSALLFCAFSATCPSDPLLSLFRHSVDKPDVRFVMHYSMPKSITHYYQESGRAGRDGNNADCILFYSYKDKKTLEFMIKKADNVRNSAACRRKIEQLYTCVRYCENTFECRRTLQLRFFGENFDKCVCNRTCDNCRADRVP--ERR--NMTSEAREVIALLDSLSHQRNGRGVTLVQLVELWRGSKSKQHTKFLNTST-LVNYGAGTKYRRDDVDRIAHSMVFDGILNE-IAESNTAG-----FNCDYVSPGPNANAVMNGSFTFFVDFEAKK 1025          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352087 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQM3_9STRA0.000e+0100.00DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D7FR28_ECTSI3.210e-17849.07DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S4EMT8_9STRA2.450e-15741.11DNA helicase n=1 Tax=Pseudo-nitzschia australis Ta... [more]
A0A7S4SBW1_9STRA2.220e-14646.60ATP-dependent DNA helicase n=3 Tax=Ditylum brightw... [more]
B8BWN4_THAPS2.180e-14046.73ATP-dependent DNA helicase (Fragment) n=1 Tax=Thal... [more]
B7FSW6_PHATC2.710e-14045.61ATP-dependent DNA helicase (Fragment) n=1 Tax=Phae... [more]
A0A4D9D6D9_9STRA1.180e-13945.60DNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
A0A1E7EUD2_9STRA2.860e-13636.35DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A6H5L064_9PHAE1.370e-13359.78DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
K0SNN9_THAOC2.980e-13343.92DNA helicase n=1 Tax=Thalassiosira oceanica TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 903..920
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 888..920
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 319..662
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 662..998
coord: 319..662
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 662..998
NoneNo IPR availableCDDcd17920DEXHc_RecQcoord: 320..506
e-value: 3.14039E-79
score: 255.537
IPR002121HRDC domainSMARTSM00341hrdc7coord: 923..1003
e-value: 3.3E-7
score: 39.9
IPR002121HRDC domainPFAMPF00570HRDCcoord: 926..993
e-value: 1.2E-10
score: 41.1
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 923..1003
score: 14.031639
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 548..639
e-value: 4.6E-16
score: 69.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 530..638
e-value: 1.1E-9
score: 38.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 513..682
score: 17.295853
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 325..515
e-value: 8.1E-17
score: 71.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 337..494
score: 19.059946
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 507..692
e-value: 7.2E-52
score: 177.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 297..506
e-value: 5.3E-64
score: 217.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 336..651
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 919..1000
e-value: 9.7E-14
score: 52.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 702..821
e-value: 1.4E-12
score: 49.3
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domainPFAMPF16124RecQ_Zn_bindcoord: 658..691
e-value: 1.3E-6
score: 29.0
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 250..293
e-value: 5.1E-11
score: 42.5
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 332..384
e-value: 1.7E-5
score: 24.6
IPR018982RQC domainPFAMPF09382RQCcoord: 715..796
e-value: 7.3E-8
score: 32.2
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 320..662
e-value: 1.1E-111
score: 371.9
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 433..442
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 923..1004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:128582..152087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352087mRNA_15552Tribonema minus UTEX_B_3156 mRNAContig_108 128298..152087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352087|estExt_Genemark1.C_Ctg_1080014 ID=Trimin1|352087|estExt_Genemark1.C_Ctg_1080014|Name=jgi.p|Trimin1|352087|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1090bp
MIARTQTGGAQRGTWQGGSQGYQGGGGGYQGGQGGGGAQQGGQQRSTVEY
DADEDDDEEMLALLDLDKIPDALLEERQALERDIPALHKRIAAARSQGGG
DHALVPVSGNGRVPARASSDGGSGSFGGTAFSAPNNFNSASTQGASMSYQ
RPADSAIGAATAGGGNWELAMSGGGGGSATLNRSDSYRGGSYAGSFSNGG
GGSFSGDGGGGGGGAFGAGGAGAVAGGGGFEGGVRGFEGGGGGVVDEDAP
MCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEG
AGGSGQQADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLI
PTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQAEIAPVMDELYQLPPF
GGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDF
RPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAVMDDAVRRLGLREHLL
HKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVV
SEKLNAHEGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICA
TVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSF
NDKNRLKNMITKVECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEA
REVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAA
EKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQAS
YVKRGHLAAGLESNDGAFTVMYRTSRGVKKKAGAGKKVPAKRKTPAKSGA
KAAKAPAAAAAAAAAGSIASAFSSAPMEAIDVDSGSDSDTWRKARPKKRT
RVIRSNSSNGSADSDRSGCRLSETHQAQLLTRLKRWTRSFAEERSMPPFQ
VLNPAAQDECAKRCPVTLDELKQCEGFSRAKVELLGAALVAEIAAFVATK
GIALKPFLAPPPPPDRGASAAGAGSDVWEDVQCSQGALEEVSAPLYPPAS
AAPVQGASPYFPAMGNAAPAAAAADAADDPFEAYRDLEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR044876HRDC_dom_sf
IPR036388WH-like_DNA-bd_sf
IPR032284RecQ_Zn-bd
IPR010666Znf_GRF
IPR011545DEAD/DEAH_box_helicase_dom
IPR018982RQC_domain
IPR004589DNA_helicase_ATP-dep_RecQ
IPR002464DNA/RNA_helicase_DEAH_CS
IPR010997HRDC-like_sf