mRNA_7778 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349084
Unique NamemRNA_7778
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: A0A835YV92_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV92_9STRA)

HSP 1 Score: 597 bits (1539), Expect = 6.650e-213
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 3 
Query:   45 MSSENRDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 944
            MSSENRDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT
Sbjct:    1 MSSENRDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 300
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: A0A836C9S2_9STRA (Putative oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S2_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 2.130e-137
Identity = 205/297 (69.02%), Postives = 244/297 (82.15%), Query Frame = 3 
Query:   63 DQHTMQHPQHQHPGP--SGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGK-QTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 944
            DQ TMQ+P+ Q+P     G+ TK+ +PG+T +M  +PDHGEK+Y+G GRLKD++AIITGGDSGIGRAVA+A+AREGADI+IS   EEEKDA  TAQLV+DAGRKC+++ GD+R E  CKGL +R V ELGG+  LVNNAAYQM   NF+DITTE FDRTM+TN+YAMFWL KYAVPHM PGSTI+NT+SV+AF+P P LLDY+MTKAAIVN TKSLGQSLI+KGIRVN VAPGP+WTP +P+TM+E  +  FGK  TP  R  QPAELA  +VF ASQESSYITAE LA+TGG LIT
Sbjct:    3 DQTTMQNPKTQYPEEVQRGEGTKVPYPGITSEMREKPDHGEKSYKGLGRLKDKRAIITGGDSGIGRAVALAFAREGADIMISCYEEEEKDALETAQLVKDAGRKCIIVPGDIRHEDRCKGLAERCVRELGGIDILVNNAAYQMEQQNFIDITTEQFDRTMKTNMYAMFWLTKYAVPHMAPGSTIINTSSVEAFRPDPFLLDYAMTKAAIVNFTKSLGQSLIDKGIRVNSVAPGPVWTPFVPATMSEGNVAGFGKAMTPMGRPAQPAELAPPFVFLASQESSYITAETLAVTGGMLIT 299
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: UPI001AC9D1C3 (SDR family oxidoreductase n=1 Tax=Actinoplanes auranticolor TaxID=47988 RepID=UPI001AC9D1C3)

HSP 1 Score: 385 bits (990), Expect = 1.610e-129
Identity = 198/293 (67.58%), Postives = 234/293 (79.86%), Query Frame = 3 
Query:   63 DQHTMQHPQHQHPGPSG-DTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQM-NIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQ 935
            DQ+  Q PQ Q+ GP   D+ +I  PG+T DM  EPDHGE++YRG GRL  ++A+ITGGDSGIGRAVAIA+AREGAD+LIS LP+EE+DA+ TAQLV  AGRK V + GD+RDE +C  LV RAV+ELGGL  LVNNAA+QM       DITTE FDR ++TNLYAMFWL K AVPHM PGSTI+NTAS+QA++PSP LLDY+ TKA IV  TK+LG  L E+GIRVN VAPGPIWTPLIP+TM EEK+E FG+ TP  RAGQPAELA AYVFFASQESSY+T E+L +TGG+
Sbjct:    4 DQYGQQDPQEQYKGPEQQDSEQIPHPGVTRDMDDEPDHGEESYRGNGRLTGKRALITGGDSGIGRAVAIAFAREGADVLISYLPDEEEDARDTAQLVEKAGRKAVTVAGDIRDEQHCTTLVQRAVDELGGLDILVNNAAFQMAQSGGIADITTEQFDRVLKTNLYAMFWLSKAAVPHMQPGSTIINTASIQAYQPSPELLDYATTKAGIVAFTKALGADLAERGIRVNAVAPGPIWTPLIPATMPEEKVESFGEDTPLGRAGQPAELAPAYVFFASQESSYVTGEVLGVTGGK 296
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: UPI0005259B48 (SDR family oxidoreductase n=1 Tax=Dactylosporangium aurantiacum TaxID=35754 RepID=UPI0005259B48)

HSP 1 Score: 380 bits (976), Expect = 2.120e-127
Identity = 196/294 (66.67%), Postives = 230/294 (78.23%), Query Frame = 3 
Query:   60 RDQHTMQHPQHQ-HPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQ 935
            +DQ+  QHPQ Q        + +I  PG TG+M  EPDHGE +YRG GRL  ++A+ITGGDSGIGRAVAIA+AREGAD+LI+ LP+EE+DA+ TAQL+  AGRK V + GD+RDE +C+ +V RAV ELGGL  LVNNAAYQM  P    DITTE FDR MRTNLYAMFWL K AVPH+ PGSTI+NTAS+QA++ SP LLDY+ TKA IV  TK+LG  L  KGIRVN VAPGPIWTPLIP+TM EEK+E FG+QTP  R GQPAELA AYVFFASQESSY+T E+L +TGGQ
Sbjct:    3 QDQYGRQHPQQQFEQADELHSDRIPHPGRTGEMRDEPDHGEDSYRGTGRLTGKRAVITGGDSGIGRAVAIAFAREGADVLIAYLPDEEQDARDTAQLIEKAGRKAVTVPGDIRDEGHCEAVVQRAVRELGGLDILVNNAAYQMAQPGGITDITTEQFDRVMRTNLYAMFWLTKAAVPHLAPGSTIINTASIQAYQSSPELLDYATTKAGIVAFTKALGAGLASKGIRVNAVAPGPIWTPLIPATMPEEKVESFGEQTPMARPGQPAELAPAYVFFASQESSYVTGEVLGVTGGQ 296
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: G8SM75_ACTS5 (Short-chain dehydrogenase/reductase SDR n=4 Tax=Actinoplanes TaxID=1865 RepID=G8SM75_ACTS5)

HSP 1 Score: 380 bits (975), Expect = 3.000e-127
Identity = 194/292 (66.44%), Postives = 232/292 (79.45%), Query Frame = 3 
Query:   66 QHTMQHPQHQHPGPSG-DTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQ 935
            Q+  QHPQ Q+  P   D+ +I  PG+TG+M   PDHGE +Y G GRL  ++A+ITGGDSGIGRAVAIA+AREGAD+LIS LPEEE DA+ TAQL+  AGRK V   GD+RDE +C  +V +AVN+LGGL  LVNNAAYQM+  +  +DITTE FDR M+TNLYA+FWL K AVPHM PGSTI+NTAS+QA+ PSP LLDY+ TKA IV  TK+LG +L +KGIRVN VAPGPIWTPLIP+TM +EK+E FG+ TP  RAGQPAELA AYVFFASQESSYIT E+L +TGG+
Sbjct:    5 QYEPQHPQDQYRTPDAQDSDRISHPGITGEMDVVPDHGEDSYHGTGRLDGKRAVITGGDSGIGRAVAIAFAREGADVLISYLPEEEDDARETAQLIEKAGRKAVTAPGDIRDEQHCATIVAKAVNDLGGLDILVNNAAYQMSQDDGLLDITTEQFDRVMKTNLYAIFWLSKAAVPHMRPGSTIINTASIQAYNPSPNLLDYATTKAGIVAFTKALGANLADKGIRVNAVAPGPIWTPLIPATMPKEKVESFGEDTPLARAGQPAELAPAYVFFASQESSYITGEVLGVTGGK 296
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: UPI00202160EE (SDR family oxidoreductase n=2 Tax=unclassified Actinoplanes TaxID=2626549 RepID=UPI00202160EE)

HSP 1 Score: 379 bits (974), Expect = 5.250e-127
Identity = 195/292 (66.78%), Postives = 233/292 (79.79%), Query Frame = 3 
Query:   66 QHTMQHPQHQHPGPSGDTT-KIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQ 935
            Q+  Q+PQ Q   P    + +I  PG TGDM  +PDHGE +Y+G GRL  ++AIITGGDSGIGRAVAIA+AREGAD+LI+ LP+EE+DAQ T QLV  AGRK V + GD+R+E++C  +V+RAV+ELGGL  LVNNAAYQM  P    DITTE FDR ++TNLYAMFWL K AVPH+ PGSTI+NTAS+QA++ SP LLDY+ TKA IV  TK+LG SL EKGIRVN VAPGPIWTPLIP+TM EEK+E FG+Q P +RAGQPAELA AYVFFASQESSY+T E+L +TGGQ
Sbjct:   11 QYGKQNPQEQFEQPDQQQSDQIPHPGRTGDMQDQPDHGEDSYQGTGRLTGKRAIITGGDSGIGRAVAIAFAREGADVLIAYLPDEEEDAQQTVQLVEKAGRKAVAVPGDIREEAHCTAIVERAVSELGGLDILVNNAAYQMAQPGGITDITTEQFDRVLKTNLYAMFWLSKAAVPHLQPGSTIINTASIQAYQSSPELLDYATTKAGIVAFTKALGASLAEKGIRVNAVAPGPIWTPLIPATMPEEKVESFGEQVPMKRAGQPAELAPAYVFFASQESSYVTGEVLGVTGGQ 302
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: A0A1K0GTT6_9ACTN (NAD(P)-dependent oxidoreductase n=3 Tax=Couchioplanes caeruleus TaxID=56438 RepID=A0A1K0GTT6_9ACTN)

HSP 1 Score: 379 bits (972), Expect = 8.260e-127
Identity = 192/296 (64.86%), Postives = 230/296 (77.70%), Query Frame = 3 
Query:   60 RDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 944
            +DQ+T + P+ QHPGP+ D     +PGLT  MP  PDHGE+TYRG GRL  R+A+ITGGDSGIGRAVAIA+AREGAD+LIS LPEEE DA+ T  L+ +AGRK V + GD+ DE+ C  +VDRAV +LGGL  LVNNAA+QM  P    +ITTE FDR M+TNLYAMFWLC+ AVPHM PGS I+NTASVQA+  S  LLDY+ TK  IV  TK+L + L E+GIRVN VAPGPIWTPLIP+TM  EK+EKFG  TP  RAGQPAELA AYV+FASQESSY+T E+L +TGG+ ++
Sbjct:    3 QDQYTRRDPRGQHPGPALDGGDQPYPGLTDAMPDRPDHGEETYRGNGRLTGRRAVITGGDSGIGRAVAIAFAREGADVLISYLPEEEPDARDTVSLIEEAGRKAVTVPGDICDEAQCAAIVDRAVQDLGGLDILVNNAAFQMAQPGGIAEITTEQFDRVMKTNLYAMFWLCRAAVPHMAPGSAIINTASVQAYLSSSALLDYATTKGGIVAFTKALAEDLAEQGIRVNAVAPGPIWTPLIPTTMPPEKVEKFGADTPLGRAGQPAELAPAYVYFASQESSYVTGEVLGVTGGKPVS 298
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: R4L8Y0_9ACTN (Short-chain dehydrogenase/reductase SDR n=3 Tax=unclassified Actinoplanes TaxID=2626549 RepID=R4L8Y0_9ACTN)

HSP 1 Score: 378 bits (971), Expect = 1.170e-126
Identity = 192/296 (64.86%), Postives = 229/296 (77.36%), Query Frame = 3 
Query:   60 RDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 944
            RDQ T Q P+ QHP P     +   PGLT  MP  PDHGE+TYRG GRL  ++AIITGGDSGIGRAVAIA+AREGAD+LIS LPEEE DAQ TAQL+  AGR  V + GD+RDE++C+ +VDRA++ELGGL  LVNNAA+QM  P    DITTE FDR MRTNLYAMFWLC+ AVPH+ PG+TI+NTAS+QA++ S  LLDY+ TK  IV  TK+L + L +KGIRVN VAPGP+WTPLIP+TM  EK+  FG  TP  RAGQPAELA AYV+FASQESSY T E+L +TGG+ ++
Sbjct:    3 RDQFTAQDPRSQHPAPELKGGEQSHPGLTSRMPDRPDHGEETYRGSGRLTGKRAIITGGDSGIGRAVAIAFAREGADVLISYLPEEEDDAQETAQLIEKAGRTAVRVPGDIRDEAHCQAIVDRALSELGGLDILVNNAAFQMAQPGGITDITTEQFDRVMRTNLYAMFWLCRAAVPHLQPGATIINTASIQAYQSSSALLDYATTKGGIVAFTKALAEDLADKGIRVNAVAPGPVWTPLIPATMPSEKVASFGGDTPLGRAGQPAELAPAYVYFASQESSYTTGEVLGITGGKPVS 298
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: A0A1Q9LLR9_9PSEU (NAD(P)-dependent oxidoreductase n=1 Tax=Actinokineospora bangkokensis TaxID=1193682 RepID=A0A1Q9LLR9_9PSEU)

HSP 1 Score: 378 bits (970), Expect = 1.550e-126
Identity = 194/295 (65.76%), Postives = 234/295 (79.32%), Query Frame = 3 
Query:   63 DQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIPN-FMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT 944
            DQHT Q P  QHP       + + PG TG++  EPDHGE TYRG GRL+D +A+ITGGDSGIGRAVAIA+AREGAD++++ LPEE++DA+ TA+ VR+AGR  V++ GDLRDE +CK +VD+AV ELGG+  LVNNAAYQM+ P   + I+TE FDR ++TNLYAMFWLCK AVP M PGS I+NT+S+QA  PSP LLDY+ TKA IVN TK L Q L EKGIRVN VAPGPIWTPLIP+TM E+ +  FGKQTP  RAGQPAELA AYVFFASQESSY+T E+LA+TGG+L +
Sbjct:    3 DQHTRQDPTTQHPADLPGQEQ-EHPGGTGEVSPEPDHGEHTYRGSGRLRDTRAVITGGDSGIGRAVAIAFAREGADVVLAYLPEEQQDAEDTARWVREAGRTAVLVPGDLRDEDHCKLVVDKAVQELGGVDVLVNNAAYQMSQPEGLLGISTEQFDRVLKTNLYAMFWLCKAAVPLMRPGSAIINTSSIQAQDPSPHLLDYATTKAGIVNFTKGLSQDLAEKGIRVNSVAPGPIWTPLIPATMNEDSVADFGKQTPLGRAGQPAELAPAYVFFASQESSYVTGEVLAVTGGKLFS 296
[Close]
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Match: A0A561WBD0_ACTTI (Uncharacterized protein n=1 Tax=Actinoplanes teichomyceticus TaxID=1867 RepID=A0A561WBD0_ACTTI)

HSP 1 Score: 378 bits (970), Expect = 1.720e-126
Identity = 192/293 (65.53%), Postives = 232/293 (79.18%), Query Frame = 3 
Query:   63 DQHTMQHPQHQHPGPSG-DTTKIQWPGLTGDMPSEPDHGEKTYRGYGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQLVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQM-NIPNFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPSPGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAEEKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQ 935
            DQ+  QHPQ Q+  P   D+ +I+ PG TG+M  EPDHGE +YRG GRL  ++AIITGGDSGIGRAVA+AYAREGAD+LIS LPEEE DA+ T +L+  AGRK V + GD+RDE++C  +V  A++ELGG+  LVNNAAYQM      +DITTE FDR M+TNLYAMFWL K A PHM PGSTI+NTAS+QA++P+P LLDY+ TKA IV  TK+LG +L ++GIRVN VAPGPIWTPLIP+TM +EK+E FG  TP  RAGQPAELA AYVFFASQESSYIT E+L +TGG+
Sbjct:    4 DQYGKQHPQEQYRSPQAQDSDRIRHPGATGEMDVEPDHGEDSYRGTGRLTGKRAIITGGDSGIGRAVAVAYAREGADVLISYLPEEEDDARDTVRLIEKAGRKAVAVPGDIRDEAHCGRIVRTALDELGGVDILVNNAAYQMAQDGGILDITTEQFDRVMKTNLYAMFWLSKAAAPHMEPGSTIINTASIQAYQPAPNLLDYATTKAGIVAFTKALGANLADRGIRVNAVAPGPIWTPLIPATMPKEKVESFGGDTPMARAGQPAELAPAYVFFASQESSYITGEVLGVTGGK 296
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349084 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV92_9STRA6.650e-213100.00Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A836C9S2_9STRA2.130e-13769.02Putative oxidoreductase n=1 Tax=Tribonema minus Ta... [more]
UPI001AC9D1C31.610e-12967.58SDR family oxidoreductase n=1 Tax=Actinoplanes aur... [more]
UPI0005259B482.120e-12766.67SDR family oxidoreductase n=1 Tax=Dactylosporangiu... [more]
G8SM75_ACTS53.000e-12766.44Short-chain dehydrogenase/reductase SDR n=4 Tax=Ac... [more]
UPI00202160EE5.250e-12766.78SDR family oxidoreductase n=2 Tax=unclassified Act... [more]
A0A1K0GTT6_9ACTN8.260e-12764.86NAD(P)-dependent oxidoreductase n=3 Tax=Couchiopla... [more]
R4L8Y0_9ACTN1.170e-12664.86Short-chain dehydrogenase/reductase SDR n=3 Tax=un... [more]
A0A1Q9LLR9_9PSEU1.550e-12665.76NAD(P)-dependent oxidoreductase n=1 Tax=Actinokine... [more]
A0A561WBD0_ACTTI1.720e-12665.53Uncharacterized protein n=1 Tax=Actinoplanes teich... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_35contigContig_35:854760..863261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349084|estExt_Genemark1.C_Ctg_350095
DescriptionDehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
COG categoryIQ
Max annot lvl201174|Actinobacteria
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,2GJU1@201174|Actinobacteria,4D8JK@85008|Micromonosporales
Evalue7.42e-131
Seed ortholog35754.JNYJ01000047_gene3505
Hectar predicted targeting categoryother localisation
TranscriptId349406
TrackFilteredModels1
ProteinId349084
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349084gene_7778Tribonema minus UTEX_B_3156 geneContig_35 854760..863261 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349084Trimin1|349084|estExt_Genemark1.C_Ctg_350095Tribonema minus UTEX_B_3156 polypeptideContig_35 855963..862821 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7778_1exon_7778_1Tribonema minus UTEX_B_3156 exonContig_35 854760..854802 +
exon_7778_2exon_7778_2Tribonema minus UTEX_B_3156 exonContig_35 855962..856082 +
exon_7778_3exon_7778_3Tribonema minus UTEX_B_3156 exonContig_35 856662..856740 +
exon_7778_4exon_7778_4Tribonema minus UTEX_B_3156 exonContig_35 857602..857759 +
exon_7778_5exon_7778_5Tribonema minus UTEX_B_3156 exonContig_35 858646..858726 +
exon_7778_6exon_7778_6Tribonema minus UTEX_B_3156 exonContig_35 860089..860280 +
exon_7778_7exon_7778_7Tribonema minus UTEX_B_3156 exonContig_35 861161..861239 +
exon_7778_8exon_7778_8Tribonema minus UTEX_B_3156 exonContig_35 862068..862114 +
exon_7778_9exon_7778_9Tribonema minus UTEX_B_3156 exonContig_35 862675..863261 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_7778UTR5_7778Tribonema minus UTEX_B_3156 five_prime_UTRContig_35 854760..854802 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7778CDS_7778Tribonema minus UTEX_B_3156 CDSContig_35 855963..856082 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_7778UTR3_7778Tribonema minus UTEX_B_3156 three_prime_UTRContig_35 862822..863261 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7778 ID=mRNA_7778|Name=jgi.p|Trimin1|349084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1387bp|location=Sequence derived from alignment at Contig_35:854760..863261+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AACAAGCACCAAAGCACCTCTGCGAACGTATTACAACAGCCAGTATGTCT
TCCGAAAACCGTGACCAGCACACAATGCAGCACCCGCAGCACCAGCACCC
CGGGCCTAGCGGCGATACCACCAAGATCCAGTGGCCCGGCCTGACGGGCG
ACATGCCTAGCGAGCCTGATCACGGCGAGAAGACGTACCGCGGCTATGGC
AGGCTCAAGGACAGGAAGGCCATTATCACCGGCGGAGACTCAGGCATCGG
GCGCGCCGTCGCCATTGCGTACGCGCGTGAGGGCGCTGACATCCTCATAT
CCGGCCTGCCTGAAGAGGAGAAGGACGCACAGACGACGGCGCAGCTCGTG
CGCGACGCCGGCCGCAAGTGCGTCGTCATGCTAGGCGACCTGCGCGATGA
GAGCTACTGCAAGGGGCTCGTCGACCGCGCCGTCAATGAGCTGGGAGGGC
TGACCACGCTCGTCAACAACGCCGCCTATCAGATGAACATCCCCAACTTC
ATGGACATCACGACGGAGAACTTTGACAGGACCATGCGCACCAACCTCTA
CGCCATGTTCTGGCTGTGCAAGTACGCCGTGCCACACATGCCGCCCGGCT
CTACCATCGTCAACACGGCGTCCGTGCAGGCGTTCAAGCCGTCGCCGGGC
CTGCTGGACTACTCCATGACCAAGGCCGCCATTGTGAACCTGACCAAGTC
GCTTGGCCAGAGCCTGATTGAGAAGGGCATCCGCGTCAACTGCGTTGCGC
CGGGTCCGATTTGGACGCCCCTGATCCCTTCCACCATGGCGGAGGAGAAG
ATAGAGAAGTTCGGCAAGCAGACACCCACGCAGCGCGCGGGACAGCCCGC
GGAGCTCGCCTCCGCGTACGTCTTCTTCGCGTCGCAGGAGTCGAGCTACA
TCACGGCGGAGATTCTGGCACTCACGGGCGGCCAGCTCATCACGTAAACG
CACCCGCGCGCGCATGTACACAGAGGGGCGCTGCTGCGCCGCCTCTTTGA
TATACGCACCGCCCCTGTGAGATACAGGAGGGGTTGAAATGGTCATCTGG
CGACTAGTCGCTTTGTAATGATCAGAGCTAGAGTCAGGCAGGGCAGCGCC
AGAAGGCAGCGCCAGGAGGGCTACAAGACGGAAGGGGGGGGGCAGGGGCA
TGCATGTGGAAGGAGGGTCCCTGGTGGTTCACAGCCTGAGGCGCTTCATG
CTTGGGAGGTGGTACATGTTGTGCATGAGAGTTTTGCATTGGAGATAGGG
AGGGATGTACACAATAGAGCGACTACATTGGCCACCTGCAGCAGAGCAGC
TGCACCTATTCGACCTGCCCCCAGGGGGTTACACGATGGTTTACATTGCT
GCTCATTACATACAAGGAGGAACGCGTTGCATGCTTT
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protein sequence of jgi.p|Trimin1|349084

>Trimin1|349084|estExt_Genemark1.C_Ctg_350095 ID=Trimin1|349084|estExt_Genemark1.C_Ctg_350095|Name=jgi.p|Trimin1|349084|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MSSENRDQHTMQHPQHQHPGPSGDTTKIQWPGLTGDMPSEPDHGEKTYRG
YGRLKDRKAIITGGDSGIGRAVAIAYAREGADILISGLPEEEKDAQTTAQ
LVRDAGRKCVVMLGDLRDESYCKGLVDRAVNELGGLTTLVNNAAYQMNIP
NFMDITTENFDRTMRTNLYAMFWLCKYAVPHMPPGSTIVNTASVQAFKPS
PGLLDYSMTKAAIVNLTKSLGQSLIEKGIRVNCVAPGPIWTPLIPSTMAE
EKIEKFGKQTPTQRAGQPAELASAYVFFASQESSYITAEILALTGGQLIT
*
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mRNA from alignment at Contig_35:854760..863261+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7778 ID=mRNA_7778|Name=jgi.p|Trimin1|349084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8502bp|location=Sequence derived from alignment at Contig_35:854760..863261+ (Tribonema minus UTEX_B_3156 )
AACAAGCACCAAAGCACCTCTGCGAACGTATTACAACAGCCAGGTGAGCA
ACGCTTGCTTGTGTGCGTCAATGTGCATGCCACAGGCGCTGTCTTCGGAA
GATAGAACACAAACTTTGGAATGGGGTACATAGGCTGAATAGGCTGCACA
GGCAAGAGCGCCACTCATCACACGGAGTCATCAAGCACGCGAACGTCAAG
GCAATGATGAGGGTAGGAGTATGTGCTGCTGCTATGGTAGCAACAATGAG
TTTAGTGTCGGGGTTCGCCGGCCCGGGAAGCGTGCGATCTACAGGTCCAA
CACTCAGGTGCGTGATGCATTGGAATTTGAATGGGCGCACGACAGCGAGA
CAGGCTCATCACGGTGGTAGCATACACGTCAACTTCAGGCTGCACTGGAT
TCAAGTCGCTCCAGTGTTCATAGAACACAGTTTACGGGGTGATACTCTCC
ATCTCGTCGGGCTGGAACACCGGGTTGAACTCGGATCTGCAGTTTGCGGG
GGCTGAGGGCGCCTATGAAACCACCTGTAGAGATCGTCGGCAACTCTTTT
GAAGGAGCCGTCACTTGTGTCATGGATGTCTTGTCTGCTTCTCGCATTGA
GTTCGGGTTTGTAATCACCAAGTTCGTTCGAAGTCCTAAATCGCCGAGCC
CTTCCACATGCTGATCATCAGGCCTAGTCATTAGCTCATGTCCACAAGAA
GCTTGATGAAGTTTTCAAAAAGGATATTTTCTGCATTGCCACGTCCATTG
CAATTGTTCATTTGCAAAACAACTTAGCACACCTCATTGCTACCAACCGA
TGAGCGGGACCTCATCAGCGCCACAAAAGCATCAGCAATAGCACCCAAAG
CACGTATGCTACAGCGCTCACGTCAATCACAATGACAGTTTCGCATAGCG
TCCGGTTCTTGATCAATATGGCTGTCTCACGAACCCGACCCTTCGTAATG
CGGCACCGCAAATCTACGTCGCTGCTGCGGCCCGCAGTCTGTTGGCGGTA
TGCTGCCAGCTGTGATTCATTCCTGGACGTTCTGGCTGAGCTTGTCTCAC
AATTGCAAGCTATGCACATCATCACACCGCTCGCAGCCTCTCAACGACAA
CACAAGCTCTCGTTACCGTATTCCATACTGAATCTTTGCCCCTGCTAGCT
CACTGATGCCGACCCGTTTGGTGCCCTCCTACGCTCCTTCTGTCCATACC
AGTATGTCTTCCGAAAACCGTGACCAGCACACAATGCAGCACCCGCAGCA
CCAGCACCCCGGGCCTAGCGGCGATACCACCAAGATCCAGTGGCCCGGCC
TGACGGGCGACATGCCTAGCGAGGTGCGTCACCACTTGAGCCATGCTGCG
CATCTTACCTCATGATCTTGAAGAAGTTCACTCCCTTCTGAACTGGATTG
AGTAGATCTTATTCTCATTCACTGAGAGGGGCGAATTATGTTGTTCCTTG
CATCTCCCTTCGTTGATGTTTCCTGCACTCGAGTCGTAAAGCTGCGGATG
CACACGCCATGCGCTGCCGCACGCACACGCGAAGGCTCGTTGCGCAGAGC
AATGGTGCACATGCGCTGCTGCATGCGTACGCGAAGGCTGATTGCGCATA
GAAACGCTGTGCAACCCTTGAGCCCCATCGGAGTGTGTCAGGCCCATGTG
GGGCAGGTTATGCTGCGATTGCAGCATTGTCGGCGCAAGGGCAAGCGCTG
TTGGACGTCATGTCAGTTGGCTTCAAAAATTACTTTTTTCCGTGGACAAA
TACGCGCCATTGTGCGAATTCCCAAGGCCGACAATTCCGCCCTCCAGACG
CGCACTTGGCGGAGCTGATAGTAGTGGTAAAACTTCATGTTGAAGTTGAA
GTTGTCTTGACGCACTCCTCTTTGCCCCCTGTTGCTGCTCCCGCTGATGC
AGCCTGATCACGGCGAGAAGACGTACCGCGGCTATGGCAGGCTCAAGGAC
AGGAAGGCCATTATCACCGGCGGAGACTCAGGTGCGTGGCTCGCGTACGT
GCACAACTTCAACAAATGCTTCAACATGTTGCATCTCACTTCGGAAGATT
CGACATGCTGATAGCAGCGTGCAGCGCATATGCATAGCCGAAGAGTGCAC
GGCGCACCACATTTGTCAAGCCCTTTTGAAGAATTAAGTGTCTTTGGCAC
GTACGAATGCTTGATGTGGGCAAGTGATGCAGTACGGCTGTCTCAAGGAC
CAGGACCGGCCACGGCCAAGTAGGTGCACCGAAATCTAGCTTCCAGTACA
GCATGTATACTGCCGCACGAAACAGTCAAGGCCTTTTTTTCAGTCCTCAG
TACCACTGAACTCGCCACTGCGCCATTGCGCCATGGGTGAAGCACTCCCC
CGCGCCCCTTCACATGCTGCAAATGCGCCGCCAAACCGGTCAAGCATGGG
TCAGAAAAACCTGTTCGCGCATGCACCAGGCTCTCAATGGCTTCCGTAAT
GGCGCGCAGGCATCAGGCGCGCCGTCGCCACCGCGTAATTTTTTTACGTA
ACGGGATGTGTCGCCGACGGCTTCTGTACTGGCTGCCCACGCATTGGACG
GGCTGTCGCTATCGCCTACGGCTCTCAACAGCTGTGTACTGTAATGTCGC
GCAGGCATTGAGCGCCCCCTGCCCTCCCCCCCTCACTCTGCTGCAATGTG
TCTCCAAACCAGTCAAGTGCGGGTTCAACTTGAAGTGTGCGCACCGCACG
CCCTCGATGGCTCCTGTAATGCAGCGCAGGCCTCGAGCGCGCTGTCGCCA
TTGCGTACCCTTGACATGCTGCAGTGTGCCGCCAATGTGTCGCCAAACCA
GTCGCGCGTGCACTGCGCAACAACTTCTTCAACGCTGTGCAGGCATCGGG
CGCGCCGTCGCCATTGCGTACGCGCGTGAGGGCGCTGACATCCTCATATC
CGGCCTGCCTGAAGAGGAGAAGGACGCACAGACGACGGCGCAGCTCGTGC
GCGACGCCGGCCGCAAGTGCGTCGTCATGCTAGGCGACCTGCGCGATGAG
GTATGTAGGTATGATGTGTCAGTGCACAGGGGTATGTATAAGGTGCAGCT
CGTGCGCGATGAGGTATGCATGTATGTTCAGACGCATGGCATGCAGGACA
TGTGGGTATGCATTCACGCGTATGGTTTGCATACGTGCATGTGGTTCATG
AGGATGCGGGCAGCAATTGCGTCGCCATGCTCGGCTACCTGCGCAATGAG
GTGCATATTTAGGTGAGTATACACGTGGAGAGTGTGCACACACGGACATG
TCAATGAGGACACGGACCGCGTGATGCTCGGCGTACGGGTGCGGCACGCA
TGCATGTACGCATGACGCACGAGCTCCCATTACGGCTGTGCATGCACATG
CCCACTTGCTGAAGACCAATGCGATGTCAGGGCTCGCGTGTATGCGTGAC
AGATGGCGAGCCGCAATGATGTGCAGGTGATCGCCGTGCACCGCTATGTG
CACACGCCCCCACCGCACTCCAACGAGGGCACGCACCATGCTTGACGCAG
CCTACATACTGCTTGCAGAATCAGTGCTCACAGTCAAGGGCTCTTTGCGG
TGACCCCGAACATGACAGTGACTATATGGTTACCTGCGACTTCCACTGCA
TTGCAGAGCTACTGCGCCATGAGCACTTGCGGCCATGAGTGACAGCAGCA
AACCTGACTCTCATGAATGACGTGCCGATTGACCATCCACACTGGTCCCT
GATTGTTGCTGCACCGCAGAGCTACTGCAAGGGGCTGGTCGACTGTACCG
TTGTACCTGACTACTAGCACCTGCCTGCTGACAACCAAGTGCAAGATCAA
TGCCCGCAGTGCTAGGCTCCTTGTGACGAGCCCCGAACATGACAATCGTT
ACATTGTGTTTGCCTGCAACCGCTGCTGCATTGTAGAGCTACTGCAAGGG
GCTCGTCGACCGCGCCGTCAATGAGCTGGGAGGGCTGACCACGCTCGTCA
ACAACGCCGCCTATCAGGTGCGGCATGTATCTCTTGCGCACGTTTTGAAG
CAACGCACGATTAGAATGTGCTCGCTCATGTGCGTGTGGCACCGTTGGGG
CTCCATGATGTGTGTGTTGCCTTTGAGTGGGGACCAACTTTCGTGGAGCG
CTTGCCAGACGCGGCAGCGCTGGCGCACGGCACCGCAGCATGAAGCACGC
GCAGCACGCGTCTGCGTACTTCCAAGCGTGTGGTGATGCCTACGAGGGCG
CCGGCGAACGACGTGCGCTCCTGTGCACCACTGTCCGCCTGCGCCACCGC
AACCTGTGCGTACACGCAGCGTCTGCGTTTGTGGCGCGCTGTGAAATCTG
GGGTGCTGCAGCAAGCACTCCTTTCTGTTCAGTTGCAGCTGAAAAGATTG
CGGATCCCCTTTTTTGGGTGCCACTGCCATGCGTCGCATACGCGCTTGCG
CTCGCTGCCTTCTTATACCAAATGATTACTTCGAATTAAAGAGGAAATAA
CTTACTTCGAAGTACAAGTACACTACAATATATCATTCTTCACCAAGACG
TTGTAATTCATCGTGTGAACTTAAATCAATAACCTTTGATCCAAGCGTTA
TATCTAAATCACCTAGAATCTTTCTATCATTTCGTAAAGTCGATTGAATA
TTTGCTGATTGTAGGCAAGATGGAGTGAAGGCAGGGCTTAACATCTCATT
AACTTTATTGGTTGGCGCGACTCTCCCTTTGGTGCACCACGCGTCACGCG
CGCAGATGACCCCCCCACTTCATGAGGACATGACTTGCTGTGGACGCTCT
TGTGGCGGCCGCTTCCACCGCATGTTGAGCGGCGCAAGTGCACGCCTTCA
CTGCTGTCACTCATCACATGTGTGTTAGTGACTCTGTCCCATTCTGAGTG
CGTGCCTTCACTGCTGTTACTCATCATGTGTGTATTGCTGACTCTCCCAC
TGCGCCGTTGCTGCAATTGCGCGTCCTGCCGTATGCGCAGATGAACATCC
CCAACTTCGTGAACATCACCTGCTGTGGACCCTTTTGTCGCCGCCGCCGC
CGCAGGTCGACTGACTCAAGTGCGCGCCTTTGCTGCTCTCATGCGTCGTG
TGCGTCGTGACACTAGTGTGCTGCCATCGCTGCCCTCACACGACGTGTGC
GCCTTACTGACGCTCCCACTGTGCCGCTGCCGCATCGCGCATCGTGGCGC
ACGCGCAGATGAACATCCCCAACTTCATGAACATCGCCTGGTACAGACCC
CTTTTTGACCGCCGCCGCTGCATATTCACCTGCGCGAGTGTGTGCCTTTA
CTGCTCTCACATGTGACATATATGTTGCTGACTCTCCCACTGTGCCACTG
CTGCATCGCGCGCCGTGCCGCACGCGCAGATGAACATCCCCAACTTCATG
GACATCACGACGGAGAACTTTGACAGGACCATGCGCACCAACCTCTACGC
CATGTTCTGGCTGTGCAAGTACGCCGTGCCACACATGCCGCCCGGCTCTA
CCATCGTCAACACGGCGTCCGTGCAGGCGTTCAAGCCGTCGCCGGGCCTG
CTGGACTACTCCATGACCAAGGTATGTAGGTTATTTACAATGATAGTATG
TGCGTATCCATTACAACTACTTAAATGTATGCCCACATGGATACGTACAA
ATCAATATGTCCACCACCATCAAACGCAGCATCCGCGCAGGCACTCAAAC
TGTTGCCGGGCCTGCTGGACTACTCCATGACAAAGATAGTATTTCAAGTT
GAAGTATAATGTATGTAGATGCACGTTGGATGCAGTAATTCGTTCGTCCA
GTATTGTCAACGCGGCGCCTGTGCAGGCGTCCGAGCTGTCGCCACGCATG
CTGACTGCTTTAAGGCGAATGTAAGTAGCTCAAGGATGCTCACGCGTTAT
TACAACGCTATGTGCAGATACTTGCGGACTGGAGAAAAATGTATCAGCAT
TCTTGCGACAACGTACACCTCTACATACCTACATGCATACATGCATGTGT
AGCGCACCCCCAGCCCTTTAGCAACCGGCCAACATCGACAAAATATGGAC
GTCACCAACTGCTGACCTGAATGGTGTGCCCAACTCTGTTCAAAGCCATT
GTTGATTGGCGTTGCGGTAGCGCTACACCAGCCCTAACCCTAACCCTAAG
AGTCATCAGCGCTGCGGCCGTCTTGCCAGGCAAGCTGAGCATGACAGAGG
CATCTCAGAACCTCAGACAGTTTGTGTAGTACTGTCCGAGTGACACTGCG
ACGACATGACATGGACTCGCGCGGCTGTTGAATTGTGGCAGACTTCACCA
CCAACCATTGGCTAAAGTGTCAACTCTGCATCTCAACATGTCGGCAGTGC
TCAACTGCCCAACTGTATCTTCAACCCAAACTGCAAGCATCGTTGTTCAG
TGCACCAGCAACAGACTCATGAGTGTGTCAATGGACTGTTGACCTTTGCA
GGCCGCCATTGTGAACCTGACCAAGTCGCTTGGCCAGAGCCTGATTGAGA
AGGGCATCCGCGTCAACTGCGTTGCGCCGGGTGAGTGACACATGCTGTAA
GCTGTTTGATGCATCTGACACTATCTGAACACGAATGATGTGCATGAAAC
CGCGGCGTGAGTCGACGGCCAAATGATGCCGTGACTACATACACTTTTGT
CGACAATCATGCCGACAGTACCCTTTTTTTTACATCAACAAAACGTGAAT
TGTGCAACAGCGGCACTAGTCGTTGGCCAGGTGATATATACATACCGCTG
AAGGGCATCCGCATTACTGCATCGCGCTGGGGAGAGGGCACACGATGCTG
CGCATGTTGAAGTACGCTAATTCTGCATTTTGCCAACAGAATATGAATGG
TTTATGATTAGCGTCAGCACAGGTGGCAGCCCAAAATTATCTCAGCGACG
TCAAAGGTGGGGCTGTTGTAGAATTAATGGCTTGTGCACGCCTTCCTGAT
CTGCAGCAGGCAGCGTGTGATCAGGCATTATCAAGTGGTCAGTGCAAGTG
TTTGCCTGCTCACGCGTTGCAATCACTGCGTGGCTAGCTTGCTGACCCCC
CCCCCCCCCCCCCCCCCCCCCCCTTACTTCAAGAAGTGACATTCCTGTAG
TAGCTGATTGCTGTCACCACAAGTGCTGCACGAGTGTCTGGGCCTGTGCG
CAAGCGGTACTGCCTAAGTTGATTTGCGCGTGCATCGTCACAACAATGAC
CATGCACCACAATGACCATGCGCTGACGGGAACTCATAGGCATTTTCAAC
TTGTTTGCTTTGGTGACGGGTATACCTCTGAAGTATGTGACTATTGGTCA
ACTAATCCTATGATGTTATTTGCCTATCCCTAACCCTTGTTGGCGTCATT
GCATGCAGGTCCGATTTGGACGCCCCTGATCCCTTCCACCATGGCGGAGG
AGAAGGTGAGCAAACACCGTTGATTGCTTGTTTTCTGGACAGTTACGAGA
CAGACTGCCCAATGAAGCCACTTGCACAGAATGAAAAGCTGGACCCAGCG
CCACCTAACAACTGCGAATGTATTTGCTCTCATACAGTTCCTATCTTGTT
CTCATCCAGTTCCGTTGAGCTGCTGTAAGAATCGTTAGCACAAATTGATG
TGCGTCAAATGTGCTTTGCGCACAGCGCTTAGGCCCTGCTTAGCGTTTTG
CAAGAGTAATGCAGATGCGCGCATCGAAGTGATGACGCGCGTCACAGAGT
GTGACACTCCTCTGGCCCAGTGCCCCTCGTGGGACAGCTCACGGACCTCA
TATTTGCGCACCTGCTTCAGCGGCTCAGCTGACGTGTCAACGCTCCACAT
CTGCACTTGATCACTGTGCGCTCACAAGGCGTGACGCCTCTCGGCCCCCT
GGTGCCCCTCGTGAGACACTCAACAGATCCGGTAACCGGAGTCCGCGTTT
CCACCTGCATTAGCGGCTCAGCTCACGTGTCTGCGCTCCGCATCTGCGCT
CGCCTCCTCCAACAGATAGAGAAGTTCGGCAAGCAGACACCCACGCAGCG
CGCGGGACAGCCCGCGGAGCTCGCCTCCGCGTACGTCTTCTTCGCGTCGC
AGGAGTCGAGCTACATCACGGCGGAGATTCTGGCACTCACGGGCGGCCAG
CTCATCACGTAAACGCACCCGCGCGCGCATGTACACAGAGGGGCGCTGCT
GCGCCGCCTCTTTGATATACGCACCGCCCCTGTGAGATACAGGAGGGGTT
GAAATGGTCATCTGGCGACTAGTCGCTTTGTAATGATCAGAGCTAGAGTC
AGGCAGGGCAGCGCCAGAAGGCAGCGCCAGGAGGGCTACAAGACGGAAGG
GGGGGGGCAGGGGCATGCATGTGGAAGGAGGGTCCCTGGTGGTTCACAGC
CTGAGGCGCTTCATGCTTGGGAGGTGGTACATGTTGTGCATGAGAGTTTT
GCATTGGAGATAGGGAGGGATGTACACAATAGAGCGACTACATTGGCCAC
CTGCAGCAGAGCAGCTGCACCTATTCGACCTGCCCCCAGGGGGTTACACG
ATGGTTTACATTGCTGCTCATTACATACAAGGAGGAACGCGTTGCATGCT
TT
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Coding sequence (CDS) from alignment at Contig_35:854760..863261+

>mRNA_7778 ID=mRNA_7778|Name=jgi.p|Trimin1|349084|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=903bp|location=Sequence derived from alignment at Contig_35:854760..863261+ (Tribonema minus UTEX_B_3156 )
ATGTCTTCCGAAAACCGTGACCAGCACACAATGCAGCACCCGCAGCACCA
GCACCCCGGGCCTAGCGGCGATACCACCAAGATCCAGTGGCCCGGCCTGA
CGGGCGACATGCCTAGCGAGCCTGATCACGGCGAGAAGACGTACCGCGGC
TATGGCAGGCTCAAGGACAGGAAGGCCATTATCACCGGCGGAGACTCAGG
CATCGGGCGCGCCGTCGCCATTGCGTACGCGCGTGAGGGCGCTGACATCC
TCATATCCGGCCTGCCTGAAGAGGAGAAGGACGCACAGACGACGGCGCAG
CTCGTGCGCGACGCCGGCCGCAAGTGCGTCGTCATGCTAGGCGACCTGCG
CGATGAGAGCTACTGCAAGGGGCTCGTCGACCGCGCCGTCAATGAGCTGG
GAGGGCTGACCACGCTCGTCAACAACGCCGCCTATCAGATGAACATCCCC
AACTTCATGGACATCACGACGGAGAACTTTGACAGGACCATGCGCACCAA
CCTCTACGCCATGTTCTGGCTGTGCAAGTACGCCGTGCCACACATGCCGC
CCGGCTCTACCATCGTCAACACGGCGTCCGTGCAGGCGTTCAAGCCGTCG
CCGGGCCTGCTGGACTACTCCATGACCAAGGCCGCCATTGTGAACCTGAC
CAAGTCGCTTGGCCAGAGCCTGATTGAGAAGGGCATCCGCGTCAACTGCG
TTGCGCCGGGTCCGATTTGGACGCCCCTGATCCCTTCCACCATGGCGGAG
GAGAAGATAGAGAAGTTCGGCAAGCAGACACCCACGCAGCGCGCGGGACA
GCCCGCGGAGCTCGCCTCCGCGTACGTCTTCTTCGCGTCGCAGGAGTCGA
GCTACATCACGGCGGAGATTCTGGCACTCACGGGCGGCCAGCTCATCACG
TAA
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