mRNA_7753 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A835YWH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH2_9STRA) HSP 1 Score: 357 bits (916), Expect = 1.690e-124 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
Query: 1 SHIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQVSAATTPRHVLNAVTIRSVNTATNQGVSASATRCGRIRV 555
SHIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQVSAATTPRHVLNAVTIRSVNTATNQGVSASATRCGRIRV
Sbjct: 1 SHIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQVSAATTPRHVLNAVTIRSVNTATNQGVSASATRCGRIRV 185
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: D7FPL5_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL5_ECTSI) HSP 1 Score: 190 bits (483), Expect = 6.300e-54 Identity = 97/152 (63.82%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 7 IVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQVSAATTPR 462
++ FHDAY D +G VCMVMEYM+ GTLQQFV + E LA VAR VL+GLA MHAQ +IHRDIKPSNILLD +GR+KI DFGV REL T S TFTGT TYMSPERI + PSDIWSLG+V+ LALG+FPL T AA+T R
Sbjct: 323 VITFHDAYMDRERGRVCMVMEYMNGGTLQQFVSGGQALSEPALAGVARSVLRGLAEMHAQRKIHRDIKPSNILLDSQGRVKISDFGVVRELNQTGSFGQTFTGTATYMSPERIKDSGHGCPSDIWSLGMVIAALALGHFPLST--GAASTDR 472
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A6H5K9K0_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K0_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.200e-52 Identity = 97/152 (63.82%), Postives = 111/152 (73.03%), Query Frame = 1
Query: 7 IVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQVSAATTPR 462
++ FHDAY D +G VCMVMEYM+ GTLQQFV + E LA VAR VL+GLA MHAQ +IHRDIKPSNILLD +GR+KI DFGV REL T S TFTGT TYMSPERI + PSDIWSLG+V+ LALG+FPL T AA+T R
Sbjct: 902 VITFHDAYMDRERGRVCMVMEYMNGGTLQQFVSGGQALSEPALAGVARSVLRGLAEMHAQRKIHRDIKPSNILLDSQGRVKISDFGVVRELNQTGSFGQTFTGTATYMSPERIKDSGHGCPSDIWSLGMVIAALALGHFPLST--GAASTDR 1051
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A7S3XQ90_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ90_HETAK) HSP 1 Score: 176 bits (446), Expect = 4.270e-50 Identity = 89/142 (62.68%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 4 HIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPL 429
HIVAF+DAYT+P +GSV +V+EYM+AGTL+ V++K DE LA VA VL+GL +HA+H+IHRDIKPSNILLDR G +KI DFG+ RE+ + LAST GT YMSPERI ++ YS+ SDIWSLGLV+ TLALG PL
Sbjct: 126 HIVAFYDAYTEPARGSVMLVLEYMNAGTLEDLVKAKVPVDEHMLATVAESVLRGLRELHAKHQIHRDIKPSNILLDRDGNVKISDFGIAREVAS--DLASTQVGTFQYMSPERIQAQPYSFNSDIWSLGLVVATLALGKMPL 265
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A7S1U8N0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N0_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.780e-48 Identity = 90/143 (62.94%), Postives = 109/143 (76.22%), Query Frame = 1
Query: 1 SHIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPL 429
S ++ F+DA+TD + +VC+V+EYM+AGTLQ V ++ +E LAAVA VLKGLA +HA +IHRDIKPSNILL+R G IKI DFGV REL T A TFTGT+ YMSPERI ++ YSY SDIWSLGL LVTLALG FP+
Sbjct: 145 SSVIKFYDAFTDMERNAVCIVLEYMNAGTLQDLVNAQVPVNEHMLAAVASSVLKGLAQVHALKQIHRDIKPSNILLNRSGHIKISDFGVARELMETIEKAQTFTGTVLYMSPERITAQEYSYASDIWSLGLCLVTLALGRFPI 287
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A7S2D6J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6J8_9STRA) HSP 1 Score: 161 bits (408), Expect = 8.760e-45 Identity = 85/148 (57.43%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 4 HIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEG------TLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPL 429
++V+ DAYTDP ++C+V+EYM+AG+LQ + S +EA+ G LA +A VL GL A+HA+ +IHRDIKPSNILLD + +KI DFG+ +EL TASLA++FTGTLTYMSPERI + YSY SD+WSLGL L+TLA+G+ PL
Sbjct: 250 YVVSSLDAYTDPENAAICVVLEYMNAGSLQGLI-SMKEANPGWVIPETMLAMIADSVLCGLEAIHARKQIHRDIKPSNILLDCKSNVKISDFGIAKELN-TASLANSFTGTLTYMSPERIAGDDYSYTSDVWSLGLCLITLAIGHLPL 395
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A7S2DFH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFH2_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.160e-44 Identity = 80/142 (56.34%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 4 HIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPL 429
HIV HDAYTDP + VC+++E+M G+L ++ KR + LA +A L+GLA +H++ IHRDIKPSNILLD RG +K+ DFG+ RE G SLA TFTGT+ YMSPERI +YSY SDIW LGL L+T+ALG PL
Sbjct: 40 HIVGMHDAYTDPEERCVCLILEFMSGGSLDSVLKLKRPLSQSELAFIAIPALRGLADLHSRRLIHRDIKPSNILLDHRGHVKLSDFGILREFG-DESLAHTFTGTVAYMSPERITRGTYSYASDIWGLGLTLLTIALGRAPL 180
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A7S2R5V6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5V6_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.490e-44 Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1
Query: 4 HIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSK-READ----EGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQ 438
+IV+F DAYTDP+ G++CMV+EYM+AG+LQ + K RE D E LA +A VL+GL A+HA+ ++HRD+KPSNILLD R +KI DFG+ +EL T S A +FTGTL YMSPERI + Y Y SD+WSLGL L+TLA G PL Q
Sbjct: 741 YIVSFLDAYTDPVNGNLCMVLEYMNAGSLQGMIDMKVREPDWVVPEAMLAIIAEAVLRGLEAVHARKKLHRDLKPSNILLDCRNNVKISDFGIAKELD-TQSFAQSFTGTLAYMSPERIEGKDYGYTSDVWSLGLCLITLASGELPLPIQ 889
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: W4GG58_9STRA (Serine/threonine protein kinase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG58_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.240e-43 Identity = 77/144 (53.47%), Postives = 110/144 (76.39%), Query Frame = 1
Query: 7 IVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQ 438
+V F+DA+T+P GSV +V+EYMD G+L+ + S+ E T+AA+A VLKGLA +H H++HRDIK SNIL++++GR+KI DFG++R+L +T + A TFTGTL YM+PERI+ +YSYPSDIWS GL ++ A+G P+ T+
Sbjct: 482 LVMFYDAFTNPEIGSVSIVLEYMDGGSLEDILHSRTPCAEPTIAAIATSVLKGLAFLHENHQLHRDIKLSNILVNKQGRVKISDFGISRDLESTLAEAMTFTGTLLYMAPERISGGTYSYPSDIWSFGLAIMACAIGKLPMPTE 625
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Match: A0A485LS37_9STRA (Aste57867_23362 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS37_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.360e-43 Identity = 77/144 (53.47%), Postives = 109/144 (75.69%), Query Frame = 1
Query: 7 IVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARGVLKGLAAMHAQHRIHRDIKPSNILLDRRGRIKIGDFGVTRELGATASLASTFTGTLTYMSPERINSESYSYPSDIWSLGLVLVTLALGYFPLQTQ 438
+V F+DAYT+P GSV +V+EYMD G+L+ F++ E T+A +A VLKGL+ +H H++HRDIK SNIL+++ GR+KI DFG++R+L +T + A+TFTGTL YM+PERI+ +YSYPSDIWS GL L+ A+G P+ T+
Sbjct: 447 LVMFYDAYTNPEIGSVSIVLEYMDGGSLEDFLRPGTRCSEDTIATIATSVLKGLSFLHETHQLHRDIKLSNILVNKAGRVKISDFGISRDLESTLAEAATFTGTLLYMAPERISGGTYSYPSDIWSFGLALMACAIGKLPVPTE 590 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165057 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7753 ID=mRNA_7753|Name=jgi.p|Trimin1|165057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=558bp|location=Sequence derived from alignment at Contig_35:638922..641419+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCCCACATCGTGGCATTCCACGACGCGTACACAGACCCCATCAAGGGCTCback to top protein sequence of jgi.p|Trimin1|165057 >Trimin1|165057|e_gw1.35.154.1 ID=Trimin1|165057|e_gw1.35.154.1|Name=jgi.p|Trimin1|165057|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp SHIVAFHDAYTDPIKGSVCMVMEYMDAGTLQQFVQSKREADEGTLAAVARback to top mRNA from alignment at Contig_35:638922..641419+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7753 ID=mRNA_7753|Name=jgi.p|Trimin1|165057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2498bp|location=Sequence derived from alignment at Contig_35:638922..641419+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_35:638922..641419+ >mRNA_7753 ID=mRNA_7753|Name=jgi.p|Trimin1|165057|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=558bp|location=Sequence derived from alignment at Contig_35:638922..641419+ (Tribonema minus UTEX_B_3156 )back to top |