Trimin1|131908|gw1.345.5.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|131908
Unique NameTrimin1|131908|gw1.345.5.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length91
Homology
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A835YV10_9STRA (Membrane subunit of NADH:quinone oxidoreductase/Mrp antiporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV10_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.200e-58
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDMAV 91
            TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDMAV
Sbjct:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDMAV 91          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A835ZB82_9STRA (Various chains-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB82_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.700e-56
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDMAV 91
            TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFY+ DMAV
Sbjct:    7 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYSKDMAV 97          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: D2Z207_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z207_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.930e-42
Identity = 71/89 (79.78%), Postives = 85/89 (95.51%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY++FACGLS YSVG+FHLANHAFFKALLFLGAGSVIHG+SDEQDMRK+GGL++LLPFTY+++ +GS SL+GLPFLTGFY+ D+
Sbjct:  316 TCSQLGYMVFACGLSNYSVGIFHLANHAFFKALLFLGAGSVIHGVSDEQDMRKMGGLKKLLPFTYSMMLIGSLSLMGLPFLTGFYSKDV 404          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: Q8SKM1_COLIR (NADH dehydrogenase subunit 5 (Fragment) n=4 Tax=Coleochaete TaxID=3123 RepID=Q8SKM1_COLIR)

HSP 1 Score: 147 bits (372), Expect = 6.270e-42
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY+IFACG+SQYSVG+FHL NHAFFKALLFL AGSVIH +SDEQDMRK+GGL  LLPFTYA++ +GS SLIG PFLTGFY+ D+
Sbjct:  139 TCSQLGYMIFACGISQYSVGIFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLVSLLPFTYAMMLIGSLSLIGFPFLTGFYSKDV 227          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A649UD00_AURAN (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A649UD00_AURAN)

HSP 1 Score: 153 bits (386), Expect = 1.490e-41
Identity = 71/89 (79.78%), Postives = 84/89 (94.38%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY++FACG+S Y+VGVFHLANHAFFKALLFL AGSVIHG+SDEQDMRK+GGLRRLLPFTYA++ +GS SL+G+PFLTGFY+ D+
Sbjct:  316 TCSQLGYMVFACGVSNYAVGVFHLANHAFFKALLFLSAGSVIHGVSDEQDMRKMGGLRRLLPFTYAMMLIGSLSLMGMPFLTGFYSKDV 404          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A7S6ZPE4_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE4_9STRA)

HSP 1 Score: 152 bits (383), Expect = 3.610e-41
Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY++FACGLS YSV VFHLANHAFFKALLFLGAGSVIH + DEQDMRK+GGLRRLLPFTYA++ +GS SL+G+PFLTGFY+ D+
Sbjct:  316 TCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAMGDEQDMRKMGGLRRLLPFTYAMMLVGSLSLMGMPFLTGFYSKDL 404          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: D2Z253_HETAK (NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z253_HETAK)

HSP 1 Score: 151 bits (382), Expect = 5.200e-41
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY++FACGLS YSVGVFHLANHAFFKALLFLGAGSVIH +SDEQDMRK+GGL++LLPFTY ++ +GS SL+G+PFLTGFY+ D+
Sbjct:  316 TCSQLGYMVFACGLSNYSVGVFHLANHAFFKALLFLGAGSVIHAVSDEQDMRKMGGLKKLLPFTYGMMLIGSLSLMGMPFLTGFYSKDV 404          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A0H3U9D2_9LILI (NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=Enhalus acoroides TaxID=55455 RepID=A0A0H3U9D2_9LILI)

HSP 1 Score: 142 bits (359), Expect = 5.880e-41
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY+IFACG+S+YSVGVFHL NHAFFKA LFL AGSVIH +SDEQDMRK+GGL    P TYAI+ +GSFSLIG PFLTGFY+ D+
Sbjct:   61 TCSQLGYMIFACGISEYSVGVFHLMNHAFFKASLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAIMLIGSFSLIGFPFLTGFYSKDV 149          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A8F0K255_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K255_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 6.990e-41
Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY++FACGLS YSV VFHLANHAFFKALLFLGAGSVIH + DEQDMRK+GGLRRLLPFTYA++ +GS +L+G+PFLTGFY+ D+
Sbjct:  316 TCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFTYAVMVIGSLALMGMPFLTGFYSKDV 404          
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Match: A0A8F0K0D6_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K0D6_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 9.650e-41
Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    1 TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQDMRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDM 89
            TCSQLGY+IFACGLS YSV VFHLANHAFFKALLFLGAGSVIH + DEQDMRK+GGLRRLLPFTYA++ +GS +L+G+PFLTGFY+ D+
Sbjct:  316 TCSQLGYMIFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFTYAMMVIGSLALMGMPFLTGFYSKDV 404          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131908 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV10_9STRA5.200e-58100.00Membrane subunit of NADH:quinone oxidoreductase/Mr... [more]
A0A835ZB82_9STRA3.700e-5697.80Various chains-domain-containing protein n=1 Tax=T... [more]
D2Z207_9STRA3.930e-4279.78NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cha... [more]
Q8SKM1_COLIR6.270e-4278.65NADH dehydrogenase subunit 5 (Fragment) n=4 Tax=Co... [more]
A0A649UD00_AURAN1.490e-4179.78NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Pel... [more]
A0A7S6ZPE4_9STRA3.610e-4179.78NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Sch... [more]
D2Z253_HETAK5.200e-4178.65NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Het... [more]
A0A0H3U9D2_9LILI5.880e-4176.40NADH dehydrogenase subunit 5 (Fragment) n=1 Tax=En... [more]
A0A8F0K255_9PHAE6.990e-4178.65NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Lam... [more]
A0A8F0K0D6_9PHAE9.650e-4179.78NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Cho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 1..87
e-value: 1.9E-20
score: 73.3
IPR003945NADH-quinone oxidoreductase, chain 5-likePANTHERPTHR42829NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5coord: 1..89
NoneNo IPR availablePANTHERPTHR42829:SF2NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5coord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_345contigContig_345:18275..18547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|131908mRNA_18695Tribonema minus UTEX_B_3156 mRNAContig_345 18275..18547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|131908|gw1.345.5.1 ID=Trimin1|131908|gw1.345.5.1|Name=jgi.p|Trimin1|131908|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=91bp
TCSQLGYIIFACGLSQYSVGVFHLANHAFFKALLFLGAGSVIHGLSDEQD
MRKIGGLRRLLPFTYAIISLGSFSLIGLPFLTGFYAIDMAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem
IPR003945NU5C-like