mRNA_8254 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|138918
Unique NamemRNA_8254
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A836CFL8_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL8_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 6.450e-140
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK 693
            MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK
Sbjct:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKKNAKAKQQDKPKRKRK 231          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A6H5KVJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 5.940e-55
Identity = 104/200 (52.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTI----TEHAPG-----------------KG-SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKT-GVTEEETAIV 531
            MR+TRAKQYRR LRFFRIVYG+ APYKV+LDGNFIH C++ KV++ +R+ +VLQG K  L VP++A +EL+ALG +FQ A  FA   C+ +     E+  G                 KG  PA++I A I +DN  +Y+VASQDE LR +LR V GCPL+++S+TVL+MEQ SGK+KA FE  ER+K  G TEEE  ++
Sbjct:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQGAKMHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAGGAXXXXXXXXXXXXXGEKGPDPAKEIIAAIGADNEGKYLVASQDENLRMRLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKKAVGTTEEEDRVL 200          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S2B5Q5_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5Q5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.600e-36
Identity = 81/219 (36.99%), Postives = 119/219 (54.34%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEET---AIVEQLRQEERQXXXXXXXXXXXXXXXXXPTAPNPLSCLPKK 648
            MR+ R K+ R+ L FFR+ +G+  PY+VLLDGNFIH C ++K+++  R+   L GEK+ L VP   I EL  LG   + A  FA  +C+ +        S +  I  LI   N   Y+VASQDE+LR +LR + G PL+++ +TVL++E     +K A   +E +K  V  +E+    +V Q+R+E +                    A NPLSC  KK
Sbjct:    1 MRLLRGKKARKTLAFFRLNFGISPPYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVA--CDSAESCSAGILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKKVAVVGDESKAMGLVRQIREEAKSAQRLRVEGHSQRPKKRAKGA-NPLSCKKKK 216          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S2B6T0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6T0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.040e-27
Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1
Query:   58 YGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGVTEEET---AIVEQLRQE 549
            + V   Y+VLLDGNFIH C ++K+++  R+   L GEK+ L VP   I EL  LG   + A  FA  +C+ +        S +  I  LI   N   Y+VASQDE+LR +LR + G PL+++ +TVL++E     +K A   +E +K  V  +E+    +V Q+R+E
Sbjct:    7 HRVACSYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVA--CDSAESCSAGILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKKVAVVGDESKAMGLVRQIREE 171          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A7S1C1L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1L6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 7.880e-26
Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQG--EKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFE 480
            MRI R KQ+R+ LRF+R++Y V  P+KVLLDGNFIH  L    E+   + ++LQ   +  +L V    ++ELR+LG +F    A A         H     S AE I +LI + N   + VASQD  LR++LR VAG P++ LS++VL++EQ S  +K   E
Sbjct:   37 MRILRQKQHRKILRFYRMMYNVSPPFKVLLDGNFIHIGLRTSAEIKRLLPSLLQERPDVVRLFVTPCILNELRSLGAEFGDTLAEARTFRVARCGHGDDPVSAAECIASLIGTKNKEHFFVASQDGLLRSRLRAVAGTPIILLSQSVLVLEQPSDASKGLVE 198          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: W7T2Y0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.160e-26
Identity = 69/186 (37.10%), Postives = 106/186 (56.99%), Query Frame = 1
Query:   28 RRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTI------TEHAP-GKG--SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKTGV-TEEETAIVEQLRQEER 555
            R+ LRF+RIVYG+  PYK+L+DGNFIH  L  K+++ +R++ +L  E      P+  +DEL A+G  F+AA  +    C  +      T H   GK   S    I  ++   N  +Y+VA+QD+EL+A+LR+V    LL++S+ V LME  S  ++      E  K  + TEEE  ++  LR +E+
Sbjct:    2 RKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEK 187          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A4P9X7C9_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X7C9_9FUNG)

HSP 1 Score: 106 bits (264), Expect = 3.220e-25
Identity = 65/167 (38.92%), Postives = 90/167 (53.89%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKF----QAAAAFATRSCQTITEHAPGKGSPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALE 489
            MR  R K Y+R LR + + +  +APY++LLDGNFIH  +  KV + E ++  +  E  + +V    ++EL+ALG+ F     AA  F  R C       P     A  IE  I   N   Y VASQD ELR ++R+V G PL +  +TVL+ME  S +T  A  A E
Sbjct:    1 MRSKREKSYKRALRLYNVAFKFRAPYQILLDGNFIHQAVKQKVRIQEALKDTVSAE-VRPMVTSCVLNELQALGKPFVAAYTAAKCFEVRGCLHQRHPVPA----ARCIETTIGPVNTFHYCVASQDNELRKRMRDVVGTPLFHFKRTVLIMEPVSRQTLTAAGAKE 162          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A3M6VBL2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBL2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 6.370e-25
Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYK--LLVPKTAIDELRALG----EKFQAAAAFATRSCQTITEHAPGKG-SPAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKA 471
            MR  RAK  R+ LR F  + G++APYKVLLDGNFI  CL  KV++ ER+   LQ + Y+    VP+ A++EL+ LG    E ++ A +F        +E    K    ++ I+ +I   N  +++V +Q+ ELR  LR V G PL+YL+++VL+ E+ S  T A
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGLKAPYKVLLDGNFIAMCLQMKVDVQERVPKYLQVKPYECEFYVPRAALEELQLLGKTMKEAYELAKSFKVAESYDQSEKEEDKPVDVSKAIQIIIGDTNDRKFVVCTQEVELRKALRLVPGVPLMYLNRSVLVFEEISHATLA 164          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A024T8F2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8F2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.350e-25
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPA-EQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKT 465
            MR  RAK  R+ LR F+ + G++ PYKVLLDGNFI  C+   V++  R+   LQ       V +  +DEL+ L +     AA+   S   + E  P   + A   + A I S N  ++IVA+Q+ ELR++LR V G PL+YL+++VL+ E  S  T
Sbjct:    1 MRYLRAKHIRKALRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPTFLQTNNCTYFVTRAVLDELKLLSDNADMRAAWEAASSFEVVEGDPDATNDATNSMLAAIGSRNDRKFIVATQETELRSQLRRVPGVPLIYLNRSVLVFEDMSEAT 156          
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Match: A0A225W858_9STRA (rRNA-processing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W858_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.540e-25
Identity = 64/162 (39.51%), Postives = 95/162 (58.64%), Query Frame = 1
Query:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYK--LLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGSPAEQ---IEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKA 471
            MR  RAK  R+ LR F  + G++ PYKVLLDGNFI  C+  KV++ ER+   LQ + ++    VP+ A++EL+ LGE  + A   A +S +    H   K    +    I+ +I   N  +++V +Q+ ELR  LR V G PLLYL+++VL+ E+ S  T A
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVHERVPKYLQVKPHECEFYVPRAALEELKMLGEAMKEAYELA-KSFKVAETHNQPKNEAMDVSKCIQTIIGDKNDGKFVVCTQEVELRKALRQVPGVPLLYLNRSVLVFEEISRATLA 161          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138918 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFL8_9STRA6.450e-140100.00Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5KVJ1_9PHAE5.940e-5552.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2B5Q5_9STRA8.600e-3636.99Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
A0A7S2B6T0_9STRA1.040e-2737.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1C1L6_9STRA7.880e-2641.98Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W7T2Y0_9STRA9.160e-2637.10Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A4P9X7C9_9FUNG3.220e-2538.92Uncharacterized protein (Fragment) n=1 Tax=Cauloch... [more]
A0A3M6VBL2_9STRA6.370e-2539.63Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A024T8F2_9STRA8.350e-2539.10Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A225W858_9STRA8.540e-2539.51rRNA-processing protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_34contigContig_34:179863..181781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|138918|gw1.34.20.1
DescriptionRRNA-processing protein. Source PGD
COG categoryS
Max annot lvl121069|Pythiales
EggNOG OGsCOG1412@1|root,KOG3164@2759|Eukaryota,1MD52@121069|Pythiales
Evalue7.27e-26
Seed ortholog42099.EPrPV00000015410
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPIN domain-like
Ec32 orthologEc-16_002850.1
TranscriptId139240
TrackFilteredModels1
ProteinId138918
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138918gene_8254Tribonema minus UTEX_B_3156 geneContig_34 179863..181781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138918Trimin1|138918|gw1.34.20.1Tribonema minus UTEX_B_3156 polypeptideContig_34 179863..181781 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8254_3exon_8254_3Tribonema minus UTEX_B_3156 exonContig_34 179863..180030 -
exon_8254_2exon_8254_2Tribonema minus UTEX_B_3156 exonContig_34 181095..181538 -
exon_8254_1exon_8254_1Tribonema minus UTEX_B_3156 exonContig_34 181701..181781 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8254CDS_8254Tribonema minus UTEX_B_3156 CDSContig_34 181701..181781 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8254 ID=mRNA_8254|Name=jgi.p|Trimin1|138918|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_34:179863..181781- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCATAACAAGAGCAAAGCAGTATCGGCGGCGCCTGCGCTTCTTTCG
CATCGTGTATGGTGTCCAGGCTCCTTACAAGGTGCTGCTCGACGGCAATT
TCATCCACGCATGCCTCGCGCACAAGGTCGAGATGGGTGAACGCATACAG
GCAGTGCTGCAGGGCGAAAAGTACAAGCTGCTGGTACCCAAAACAGCCAT
TGACGAGCTGCGAGCTTTGGGCGAGAAATTTCAGGCAGCTGCCGCCTTCG
CCACTCGCAGCTGCCAAACCATCACCGAGCACGCGCCTGGGAAAGGCAGC
CCAGCAGAGCAGATTGAGGCGCTCATTAGCTCTGACAACCCTCACAGATA
TATAGTCGCATCGCAAGATGAGGAGCTGCGGGCCAAGCTGAGGAATGTGG
CTGGGTGTCCACTGCTCTACTTGAGCAAGACGGTGCTACTGATGGAGCAG
GCGAGCGGGAAAACGAAGGCCGCGTTTGAGGCTCTGGAGAGGAGGAAAAC
GGGAGTTACGGAGGAGGAGACTGCGATCGTTGAACAGCTGAGGCAGGAGG
AGCGGCAAAAACGGGCGGCAGAAGCAGCGGCAAAACCGGCAAAAAGAATC
AAGAGGGCACCGACAGCACCAAATCCGTTAAGTTGCTTGCCGAAGAAGAA
TGCCAAGGCCAAGCAGCAAGACAAGCCTAAGCGAAAGCGAAAG
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protein sequence of jgi.p|Trimin1|138918

>Trimin1|138918|gw1.34.20.1 ID=Trimin1|138918|gw1.34.20.1|Name=jgi.p|Trimin1|138918|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQ
AVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQTITEHAPGKGS
PAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQ
ASGKTKAAFEALERRKTGVTEEETAIVEQLRQEERQKRAAEAAAKPAKRI
KRAPTAPNPLSCLPKKNAKAKQQDKPKRKRK
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mRNA from alignment at Contig_34:179863..181781-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8254 ID=mRNA_8254|Name=jgi.p|Trimin1|138918|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1919bp|location=Sequence derived from alignment at Contig_34:179863..181781- (Tribonema minus UTEX_B_3156 )
ATGCGCATAACAAGAGCAAAGCAGTATCGGCGGCGCCTGCGCTTCTTTCG CATCGTGTATGGTGTCCAGGCTCCTTACAAGGTGCGTTCTTCGTCTCGAT CAAACTTCAAAGGTTGTGACAGATGCACAACAGGTTGTCCCACTGGCATG CTCGCTCCCACTATTACTGCTCGGTCGCCCGTCATCTGCATTCAACGTTC AATTTACAGCAAGCCTCTCTCATCCTGTGCTCCGCTGTCCCAGGTGCTGC TCGACGGCAATTTCATCCACGCATGCCTCGCGCACAAGGTCGAGATGGGT GAACGCATACAGGCAGTGCTGCAGGGCGAAAAGTACAAGCTGCTGGTACC CAAAACAGCCATTGACGAGCTGCGAGCTTTGGGCGAGAAATTTCAGGCAG CTGCCGCCTTCGCCACTCGCAGCTGCCAAACCATCACCGAGCACGCGCCT GGGAAAGGCAGCCCAGCAGAGCAGATTGAGGCGCTCATTAGCTCTGACAA CCCTCACAGATATATAGTCGCATCGCAAGATGAGGAGCTGCGGGCCAAGC TGAGGAATGTGGCTGGGTGTCCACTGCTCTACTTGAGCAAGACGGTGCTA CTGATGGAGCAGGCGAGCGGGAAAACGAAGGCCGCGTTTGAGGCTCTGGA GAGGAGGAAAACGGGAGTTACGGAGGAGGAGACTGCGGTGAGATATAATT GCGTCATTTCCATCACTGCTTGTATAGTCATGTCATGATGTCATGCTATC ACTGCTAGACGTGTTGTTCGGTGCACAGCAGCAGCAGCAGCAGCAGCAGC GGCCTTTGGATTATGATTTCAAAGGGTTTATTCTAGAGGAGCTCGCGCAG TGTGCGAAATTGGTATCGCGAGATGTTTACTCGTACCACTTATCAGCTGT GGACCAGTACAGGCTTTACTCGTTGCCTCACACAACAGGTTACGCGTGCA AGTTATTCCGCGGCCACGGGTACGAGTTAAAACTTGTGTCAAAAACTCGT ACTCATACGCGTGCCACGGGTGTACACGCTATCTCTGCAATAAGAGCATC GTCAGGATGATGATGGTGTACGGTCAGGATGCAACTTGTATGATGCACGC CGTCACGGGCCCACAAATTCCTGTCACAACGGGATGCATATGATGCGATG GCAGTTTCTCTACTGGTACCCTCTGGCCAGCGCATACTTGTTGCCAAAGC AGTGGTCTAGGCATGTGGCGCATGGCTAGTTTAGTCTGGTATTTCAACAC CAGGTGTTTAGTCTGGTATTTCAACACCAGGAATGCTGTCTGCATTTCAA CAGCACAAATGCCACAGCTCTTCAGTTAACGGTCAGACCTGATTCTACTC ACAAGGTGCGTGCTTACCCACCTTGATCCAAGGGACTGGCACCACCCTTC GCACAATGCCTGGTCAAACAGTTTGTATTGGGAGCGCTGCTCCAAACACT CGAGATATTATTCATGATTGCTGCTTCCGGCCCTGACAGTCAGTCTTATC AAAGCTCAAATGGCATCATCAAAGTCCTTGTCCACACATCGTAACATCGA ATTCTCTTACCTTCAGGTCTTGGGTGCTAGTGTAGCCAGTAGGTTTGCCA GCTCCAACTGCGGTTGCTTGCCTGCTGTTGCAGAACACCGGTTCTCTCGC CAATCCTTGCACAAATCAGCACCAAAGCTCAACTGCATGTGTCTATACTT GAAGTACATGACAATTCAACCAACCATGTTGCTGTATTTCGCACTTCACA GATCGTTGAACAGCTGAGGCAGGAGGAGCGGCAAAAACGGGCGGCAGAAG CAGCGGCAAAACCGGCAAAAAGAATCAAGAGGGCACCGACAGCACCAAAT CCGTTAAGTTGCTTGCCGAAGAAGAATGCCAAGGCCAAGCAGCAAGACAA GCCTAAGCGAAAGCGAAAG
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Coding sequence (CDS) from alignment at Contig_34:179863..181781-

>mRNA_8254 ID=mRNA_8254|Name=jgi.p|Trimin1|138918|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_34:179863..181781- (Tribonema minus UTEX_B_3156 )
ATGCGCATAACAAGAGCAAAGCAGTATCGGCGGCGCCTGCGCTTCTTTCG
CATCGTGTATGGTGTCCAGGCTCCTTACAAGGTGCTGCTCGACGGCAATT
TCATCCACGCATGCCTCGCGCACAAGGTCGAGATGGGTGAACGCATACAG
GCAGTGCTGCAGGGCGAAAAGTACAAGCTGCTGGTACCCAAAACAGCCAT
TGACGAGCTGCGAGCTTTGGGCGAGAAATTTCAGGCAGCTGCCGCCTTCG
CCACTCGCAGCTGCCAAACCATCACCGAGCACGCGCCTGGGAAAGGCAGC
CCAGCAGAGCAGATTGAGGCGCTCATTAGCTCTGACAACCCTCACAGATA
TATAGTCGCATCGCAAGATGAGGAGCTGCGGGCCAAGCTGAGGAATGTGG
CTGGGTGTCCACTGCTCTACTTGAGCAAGACGGTGCTACTGATGGAGCAG
GCGAGCGGGAAAACGAAGGCCGCGTTTGAGGCTCTGGAGAGGAGGAAAAC
GGGAGTTACGGAGGAGGAGACTGCGATCGTTGAACAGCTGAGGCAGGAGG
AGCGGCAAAAACGGGCGGCAGAAGCAGCGGCAAAACCGGCAAAAAGAATC
AAGAGGGCACCGACAGCACCAAATCCGTTAAGTTGCTTGCCGAAGAAGAA
TGCCAAGGCCAAGCAGCAAGACAAGCCTAAGCGAAAGCGAAAG
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