Trimin1|348948|estExt_Genemark1.C_Ctg_330058 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348948
Unique NameTrimin1|348948|estExt_Genemark1.C_Ctg_330058
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length493
Homology
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BLAST of jgi.p|Trimin1|348948 vs. uniprot
Match: A0A835Z363_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z363_9STRA)

HSP 1 Score: 788 bits (2036), Expect = 6.490e-285
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0 
Query:    1 MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT 492
            MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT
Sbjct:    1 MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPFWGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDYLPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKGAAAAAASPLSLPTLCAELCGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXGSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGGLPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQELSQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAADVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGXXXXXXXXXXXXXXXXXXXXXXXXXXSLEGAFVCEWAGLQVVTAVXXXXXXXXXXXPLSVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT 492
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348948 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z363_9STRA6.490e-285100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..311
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 9..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:370009..375714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348948mRNA_5946Tribonema minus UTEX_B_3156 mRNAContig_33 370009..375792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348948|estExt_Genemark1.C_Ctg_330058 ID=Trimin1|348948|estExt_Genemark1.C_Ctg_330058|Name=jgi.p|Trimin1|348948|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=493bp
MDLWNVGAVVMAVREADRRLALITRQTGCAAVLSNDTDFLIYDAPGFIPF
WGLDVSPEAALAFVFSRQKLARTKAIVSNARAGRQTSRGLSGGEGGGNDY
LPDAPDYCHAAILSGAAWGGHGSSRHKGSRAVLESVGKYLAFKTRLTGKG
AAAAAASPLSLPTLCAELCGSGSGGGGSSGSSAAPTAARRACNRKKRRRK
GSISDAAAAAPHDPGNVPASRPERFLALLMASIAQYDLAGGERVTGGGGG
LPRSLHVVPSVTQAVTEGVFWGGVVLEDSSEGRGGAWLQSPSEQAREQEL
SQGTSHKRIGGHPSSATAAAAAAEHCCTLLGLERGAAILARHARNAPAAA
DVLAAVLTAAVAQRHSAGPSFLGLLAFIAAAAAPPSVPAECGCLCACRCA
CGADNDGSGGGGAAAAAASLEGAFVCEWAGLQVVTAVVVVVMVLLLLLPL
SVLLLPPLLGTMMLPLPLLVEPLTVTVAGIAMPLAPAMTFVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf