mRNA_5940 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348945
Unique NamemRNA_5940
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A835YWI6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI6_9STRA)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 3
Query:  111 MCRNRSSKSSTTDSNSSGLIDGASVLACAVAPVAEGTTSVIAESAMNRGDYEIPHTVLIPGSNRVVPIGYKRRMTLLEMVAVQAAAAALVLLRTTWGINLRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSPQRSTTAAPQS 1652
            MCRNRSSKSSTTDSNSSGLIDGASVLACAVAPVAEGTTSVIAESAMNRGDYEIPHTVLIPGSNRVVPIGYKRRMTLLEMVAVQAAAAALVLLRTTWGINLRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSPQRSTTAAPQS
Sbjct:    1 MCRNRSSKSSTTDSNSSGLIDGASVLACAVAPVAEGTTSVIAESAMNRGDYEIPHTVLIPGSNRVVPIGYKRRMTLLEMVAVQAAAAALVLLRTTWGINLRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSPQRSTTAAPQS 514          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A6H5KA25_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA25_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 2.530e-76
Identity = 191/515 (37.09%), Postives = 262/515 (50.87%), Query Frame = 3
Query:  207 VAEGTTSV-IAESAMNRGDYEIPHTVLIPGSNRVVPIGYKRRMTLLEMVAVQAAAAALVLLRTTWGINLRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPS----PETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPG-DSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPP-------------------------------------SPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSP 1622
            V E T ++ +A++     D ++P+TV   G    +  G  RR +LLE   +  AA   V  +T           +RR  +      +  A++ ++      +YRE+ L P+L  PE V    +S+F +  G+KVH L E+P S    P  +  VLH NHGFGA S SW PV+ RL+R L A A+AHD PGFGLT RV L   A  Y+L+ NA IT  L++ G +   +S       +L GHSMG +TAA  A+     P +TTLVLVAPAL+   +  A    A  XXXX                                        +    R R+  +         A   A  +L+   LLP+  PL  L L  + YSG FWR  L+KAW D+AGV L+VVNRYRWP+LVR WDRG ALF+L + +    A        LV A+  KA  GM++I+I G +D LVS+  ++A+   IP   L+ L  CGHVPHEE PD FL ++  ++SP
Sbjct:   63 VGEATANMRLADAGDGAEDSDVPNTVDYNGET--LTFGDYRRPSLLESCVLALAAVGPVGWKTLSTFRK-----SRRTWAKVAVAIVAPAVAWVVRSVLGYLYREIVLQPKLRSPESVA-FPNSRFEDVGGLKVHYLRENPTSVDGTPVPARRVLHMNHGFGASSSSWSPVIRRLSRDLGALAIAHDTPGFGLTGRVGLLE-ANRYSLRSNAAITGNLVQNGLEELGESTASEGRCVLMGHSMGCITAATTALDPSLPPHHTTLVLVAPALSLPRKITAEQRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDAGSSARGRVGAVVGAPASAAQAVLHAGVWLFNWCLLPMIYPLEILGLRTLAYSGNFWRGALRKAWVDQAGVDLDVVNRYRWPTLVRYWDRGFALFLLDRLQIG--AGGRAGPSGLVEAVAAKAAQGMKVIVIQGDKDTLVSSKKAKAITDAIPGATLLLLPECGHVPHEERPDDFLRLVLEQISP 566          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: D7FPL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL0_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.520e-36
Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = 3
Query: 1152 FLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARLSP 1622
            +L+   LLP+  PL  L L  + YSG FWR  L+K W D+AGV L+V+NRYRWP+LVR WDRG ALF+L + +    A        LV A+  KA  GM++I+I G +D LVS+  ++A+   IP   L+ L  CGHVPHEE PD FL ++  ++SP
Sbjct:  119 WLFNWCLLPMIYPLEILGLRTLAYSGNFWRRALRKVWVDQAGVDLDVINRYRWPTLVRYWDRGFALFLLDRLQIG--AGGRAGPSGLVEAVAVKAAQGMKVIVIQGDKDTLVSSNKAKAIADAIPGAKLLLLPECGHVPHEERPDDFLRLVLEQISP 273          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A7S4Q291_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q291_9DINO)

HSP 1 Score: 151 bits (382), Expect = 1.860e-36
Identity = 130/381 (34.12%), Postives = 178/381 (46.72%), Query Frame = 3
Query:  513 RELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQR--VPLRRTA---GVYTLQKNAEITRALL------KPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAE-FEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKR-KADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARL 1616
            R+    P L  P +V P  +S    A+G+ VH L       E +  +    HGFGA +LSWE     L + LNA  LA D PGFGLT+R  +PL+  A     Y    +AEI RAL+      KP   G D        +L GHS+G ++A+L A+     E   T+LVL +PA+ A           AA    A P+P   R     L+ P          A R     ALLP         L  +VY   FW  GL  A     G    ++  YRWPSLV+ WD+GLA FV ++       H +  E  +V  L   + D G+R++L+HG  D +V  ++S  L   + A  LV + +CGHV HE+ P+AF    A  +
Sbjct:  122 RQARCRPELKPPREVLPLKASCLALASGVTVHYLRRRR---ERAPRLAVCFHGFGASALSWERGWVSLGKKLNAEVLAFDAPGFGLTERPPLPLKNEALDSSPYRCGTSAEIARALVRIHGRQKPDPGGCD-------LVLLGHSLGAISASLTALALPPGEQARTSLVLESPAIFAP----------AAGGRKAGPAPGPPR-----LSPP----------AWRLWPIVALLPWV-------LRRLVYRRRFWERGLGLA----GGADERLLTHYRWPSLVQNWDKGLARFVATR------LHGELEEADIVERLATARRDNGLRVLLVHGEGDSIVPVSNSERLAEALGA-KLVRVPDCGHVAHEQAPEAFAAAAAGGI 449          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A8J6CI82_DIALT (Hydrolase_4 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CI82_DIALT)

HSP 1 Score: 151 bits (382), Expect = 2.570e-36
Identity = 123/350 (35.14%), Postives = 163/350 (46.57%), Query Frame = 3
Query:  573 SQFREAAGIKVHLLHESP-PSPETS----NTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRAL-KSLIPAIDLVELQNCGHVPHEEMPDAFLDVL 1604
            S+F     + VH L   P P P T      TV H NHGFGA SLSW  VL  LA +L A  LAHD  GFGL+ R      A  Y   +   + + L+         EG  +  +L GHS+G   +   A+ A    R   LVLVAPALT+      ++  A A       S       L+++ +  RG               A L    PL  L+L   VYS  FW  GL  AW D++ +    + RYR PSL + WD GL  F  + +       S       +A L RK D  + ++++HG++D +   A SR L ++L P   LVEL  CGHVPHEE P+ FL  L
Sbjct:  169 SRFLSVDDVSVHFLQRLPAPKPSTPPRAVRTVAHLNHGFGASSLSWLDVLGPLADALGALTLAHDRLGFGLSARPA---AASSYRAAEQGALAQRLVAAVAVERGVEGAPR--VLIGHSLGAQLSLDQALDAP--SRCAALVLVAPALTSRFERARSSKQAVAASVGPVSSA------LALVVSTARG---------------AALRALRPLFLLALRSAVYSARFWARGLGAAWGDRSRITDATLGRYRRPSLAKGWDVGLLCFAQAMAAVRDGGDSTRTTASQIALL-RKLD--VPVLIVHGSKDRVTPIAGSRRLAEALGPNATLVELDGCGHVPHEETPERFLAAL 487          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A836C993_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C993_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.390e-34
Identity = 85/183 (46.45%), Postives = 112/183 (61.20%), Query Frame = 3
Query:  507 IYRELFLAPRLNKPEDVPPSTSSQFREAAGIKVHLLHESPPS------------PETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGV-YTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTR 1016
            +Y E+ L PRL+ P DV P  SS+F+E  G++VHLL E PP+            P  +  VLH NHGFGACSLSW PVLA L+ +L+A ALAH  PGFGLT+R+ L   A   YT    A I+  L++     +D E G +  I  GHS+G + AA AA+  EF+ + TTL+LV+PAL   T+
Sbjct:   38 LYCEIILPPRLSDPRDVAPELSSRFKEVFGLQVHLLDERPPAATATPPAPSTAPPPLTKYVLHCNHGFGACSLSWVPVLAPLSAALDAHALAHCQPGFGLTERIGLSGNAQAGYTQANGAYISAELVR-----ADREAGSR-VIFMGHSVGAIAAAGAALKPEFDAKSTTLILVSPALLGQTK 214          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: W7TV43_9STRA (AB hydrolase-1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TV43_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.400e-32
Identity = 160/539 (29.68%), Postives = 241/539 (44.71%), Query Frame = 3
Query:  300 RVVPIGYKRRMTLLEMVAVQAAAAALVLLRTT--------WGIN-LRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPE---------------DVPPST----SSQFREAAGIKVH-LLHESPP---SPETSNT--------VLHFNHGFGACSLSWEPVLARLARSLN----ARALAHDMPGFGLTQRVPLR----RTAG-----VYTLQKNAEITRALL--------KPGDSG--SDSEGGHKHTILFGHSMGGVTAALAAV-----------GAEFEPRYT---TLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALS---LHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVA---------ALKRKA----DAGMRIILIHGAQDPLVSAASSRALKSLIPA-----------IDLVELQNCGHVPHEEMPDAFLDVL 1604
            RV+  G+K R  +   VA+Q+ A  L + R          W I  L Y   T    S  ++L  V   + +  VP + +  +LF AP L  PE               D+P S+    SS    +  +K+H L+H   P   +P +++         ++H NHGFGA + S+EPVLA LAR L     A A+AHD PGFGLT+ VP        AG     ++T + NA +   L+        + G  G   +++ G +  +  GHSMG +T+A  AV           G E E   T   TLV++APA+  + ++P+                     RL      F G R   ER AR+++R+    + + L+ L+   L  + YS  FW  GL  AW D        V  YR PSL   W+ GL+ FVL+       A     EEP V           LK  A    +  +R++L+HG +D +V  +++R L + +             +++VEL+  GHVPHEE+P+ F+  +
Sbjct:  111 RVLSFGFKPRPRI-SRVALQSTAVFLAIARRMLVPFKKWRWHITGLPYSHLT----SPLISLAFVLLEAYVYLVPLRQLQLQLFYAPSLVPPEMLRFPTSQFRTLSAEDLPSSSPRLPSSPPPSSPILKLHALVHREGPGLGAPSSTSRSRSRGARYLVHCNHGFGANAFSFEPVLAPLARLLGRTHPALAVAHDAPGFGLTE-VPKEGGRENGAGGGEGELFTFEHNARLGGRLMEELGREGERDGGKGMAEEADEGGERRVFLGHSMGALTSAYMAVRHVQQEGGGDGGREAESGVTAPVTLVMIAPAIMPMRQSPS---------------------RLPPAGRFFLG-RLFPERVARYIFRKTGPALRASLLFLTASFLRALCYSDKFWMDGLSLAWGDGGPPPPSTVAHYRLPSLKAGWEGGLSRFVLAPL----FAGRRRKEEPAVGEGRNGEKGDVLKALASGVKEGRLRVLLVHGERDRVVPLSNTRRLAAALRGQVGEGGGREGGVEVVELEGVGHVPHEEVPERFVQAV 617          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A7R9TQM1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TQM1_MICPS)

HSP 1 Score: 138 bits (347), Expect = 1.220e-31
Identity = 117/363 (32.23%), Postives = 169/363 (46.56%), Query Frame = 3
Query:  618 ESPPSPETSNTVLHFNHGFGACSLSWEPVLAR-LARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHK-------HTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNR--------YRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEE--------------PLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARL 1616
            E+  S     TV+   HGFGA + S+E   A  LA +LNA  +AHD PGFGLT+R    R    YT + NA++ RA+L+  ++ ++   G +         +  GHSMG +  ALAA     +     +VLVAPA+    R   T               +++ AR  +   P   L +     AR +   AL    SP + L L  IV + AFWR GL  A     G  +  V R        YR PS+V  WDRG+A  VLS +       + T  +                       A +G R++++HG +D +V  ++S  L + +P  +LV ++ CGH+PHEE PD FLD + A L
Sbjct:  132 ENDASSRDVATVVSCVHGFGANAYSFERATAAPLADALNAVVVAHDSPGFGLTERP---RDLRAYTPRANAKVCRAMLRLAEAKAEDATGSRTPLRTPPRRVAVGHSMGALAVALAAGEGGIDD----VVLVAPAIVPKRRRKNT---------------ERQPARKRLWTRPLGVLIALASAVARVVVA-ALARALSPFLVLFLRKIVRNAAFWREGLASA----VGSPMRRVMRDDRSWTDGYRRPSVVTGWDRGMARVVLSAATGGLDGVAATARDGARRVXXXXXXXXXXXXXXXXXLARSGARVLIVHGDEDVIVPRSNSEKLAAALPRAELVVVRGCGHMPHEECPDVFLDAVRAFL 467          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A7S3UD92_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UD92_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 6.480e-29
Identity = 124/472 (26.27%), Postives = 208/472 (44.07%), Query Frame = 3
Query:  312 IGYKRRMTLLEM-VAVQAAAAALVLLRTTWGINLRYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNK---PEDVPPSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLARLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGDSGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAVTRTPATTNLAAAXXXXAPPSPQQRRARLSMLAAP------FRGLRSAGERAARFLYRRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQ-------------------SRWSKVAHSDTPEEPLVAALKRKADA--------GMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARL 1616
            + ++  +T LE+ VA   +  +  ++ T + ++   G      + + L+L     +  ++FV  + +   LF+  + ++   P +      S FR+  G+KVH    +  +    + VL   HGFGA + SWE V  +++       LA DMPGFGLT+R    +    Y++  + ++   L+   +     +   K  +L GHS+G   AA+AA       R   LVLV PA+ A                    +   +R   S+L  P      F GL              +L  + +P V   L  +V S  FWR GLQ AW     +  + ++ YR   L R WD+GL  F  ++                   S+W      +T     + A + +A+          M ++++HG +D LV A++S+ L +++   + VEL  CGHVP EEMPD F++++AA L
Sbjct:   89 LDFQPELTKLEVFVANAVSVVSSAVIGTIFFLSRSRGKSASGTVGTALSLAFEVLVCAIVFVAARKMTAGLFIEKKESEIMLPPEHLGDPDSLFRDVDGLKVHFKR-TVQAGTVPDKVLCCLHGFGANTFSWEAVQNKMSAETKGEVLAMDMPGFGLTERP---KELKKYSMGCSGQLAMGLMDLEEQEGTLQKNAKR-VLIGHSLG--CAAVAAAALADPSRIGALVLVNPAIVA--------------------TGGAKRKVFSILTKPLVLLQLFTGL-----------IMNSLTALLTPFVLPFLRSLVRSKTFWRRGLQSAWARPELLTDDTIDGYRRSKLARGWDKGLWKFCRAKLLPASELGGAKENISGPQGSQWQFWEAFNTYMSSALKAQRSQAEELASIVEMQQMPVLIVHGREDKLVPASNSKRLSTMLMGSEYVELHPCGHVPQEEMPDQFVNIVAAFL 522          
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Match: A0A7S3Y2B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B8_HETAK)

HSP 1 Score: 117 bits (292), Expect = 2.230e-26
Identity = 61/147 (41.50%), Postives = 82/147 (55.78%), Query Frame = 3
Query: 1179 VASPLVALSLHPIVYSGAFWRTGLQK-AWFDKAGVGLEVVNRYRWPSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIILIHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAARL 1616
            V  PL+ L L P+VY   FW+  L+K  W+    V    + RY+WPSLV+ WDRG+A F L+    S  + S      +   LK   D GM++I+IHGA D +V   SSR L  + P I   E++  GHVPHEE P  F ++L  RL
Sbjct:   70 VLYPLLVLGLRPMVYDNKFWQRSLEKFVWYKPGLVTETTLTRYQWPSLVQEWDRGMARFCLAPLSKSCSSSSTINSSSMYEKLKSHVDKGMQLIIIHGASDKVVPLESSRRLAHMHPNIQFEEMEKVGHVPHEEAPVKFNELLRKRL 216          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348945 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWI6_9STRA0.000e+0100.00Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A6H5KA25_9PHAE2.530e-7637.09Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
D7FPL0_ECTSI1.520e-3647.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4Q291_9DINO1.860e-3634.12Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A8J6CI82_DIALT2.570e-3635.14Hydrolase_4 domain-containing protein n=1 Tax=Diac... [more]
A0A836C993_9STRA3.390e-3446.45Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
W7TV43_9STRA1.400e-3229.68AB hydrolase-1 domain-containing protein n=2 Tax=M... [more]
A0A7R9TQM1_MICPS1.220e-3132.23Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S3UD92_9CHLO6.480e-2926.27Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S3Y2B8_HETAK2.230e-2641.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:339312..341978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348945|estExt_Genemark1.C_Ctg_330051
DescriptionAlpha/beta hydrolase family
COG categoryS
Max annot lvl3041|Chlorophyta
EggNOG OGsCOG0596@1|root,KOG1454@2759|Eukaryota,37PQV@33090|Viridiplantae,34IHC@3041|Chlorophyta
Evalue2.16e-36
Seed ortholog248742.XP_005649219.1
Hectar predicted targeting categoryother localisation
TranscriptId349267
TrackFilteredModels1
ProteinId348945
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348945gene_5940Tribonema minus UTEX_B_3156 geneContig_33 339312..341978 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5940_1exon_5940_1Tribonema minus UTEX_B_3156 exonContig_33 339312..340703 +
exon_5940_2exon_5940_2Tribonema minus UTEX_B_3156 exonContig_33 341716..341978 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5940UTR5_5940Tribonema minus UTEX_B_3156 five_prime_UTRContig_33 339312..339421 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5940CDS_5940Tribonema minus UTEX_B_3156 CDSContig_33 339422..340703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348945Trimin1|348945|estExt_Genemark1.C_Ctg_330051Tribonema minus UTEX_B_3156 polypeptideContig_33 339422..341978 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5940 ID=mRNA_5940|Name=jgi.p|Trimin1|348945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1655bp|location=Sequence derived from alignment at Contig_33:339312..341978+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTCGCTGTCCAGCTCGGCCGCTGCTCTCAACGCCCTGGGCGGGCAACAC
GTGTTGAAGCAGCTTAAGCGCTGTTCCACACGGAGCAGCGGCGTCGGCAG
CAGTGGTCCCATGTGCCGCAACAGGAGCAGCAAGAGCAGCACCACCGACA
GCAACAGTTCTGGCTTGATCGATGGCGCCTCCGTGCTAGCCTGCGCGGTG
GCTCCGGTAGCTGAGGGAACGACCAGCGTGATCGCGGAGAGCGCCATGAA
TAGAGGCGACTACGAGATCCCCCACACGGTGCTGATACCCGGCAGCAACA
GGGTAGTTCCCATAGGCTACAAGAGGAGAATGACGCTGCTGGAGATGGTG
GCTGTTCAAGCAGCTGCAGCTGCTCTCGTCCTCTTACGCACCACCTGGGG
CATCAACCTCCGCTACGGCGGCTTCACCCGGCGCCCCCTGTCCTCCTTCT
TGAACTTATTCATCGTCGCAGCCCTGTCCAGACTGCTCTTCGTGCCTTTC
CAGCTCATTTACAGGGAGCTTTTCCTGGCCCCGCGCCTCAACAAGCCCGA
GGACGTCCCCCCCTCCACCTCCAGCCAGTTCCGCGAGGCAGCGGGCATCA
AAGTCCACCTCCTTCACGAGTCCCCCCCCTCCCCCGAAACCTCCAACACG
GTGCTGCACTTCAACCACGGCTTCGGCGCGTGCAGCCTCTCCTGGGAGCC
CGTGCTGGCGCGCCTGGCGCGGTCGCTCAACGCGCGCGCCCTCGCCCATG
ACATGCCGGGCTTCGGCCTCACGCAGCGTGTGCCGCTGCGCCGCACCGCC
GGCGTGTACACGCTGCAGAAGAACGCCGAGATCACACGCGCGCTGCTCAA
GCCCGGCGACAGCGGCAGTGACAGCGAGGGCGGACACAAACACACCATCC
TCTTCGGGCACAGCATGGGCGGCGTGACGGCGGCGCTGGCGGCGGTCGGC
GCGGAGTTCGAGCCGCGATACACGACGCTGGTGCTGGTGGCGCCGGCGCT
GACGGCCGTCACGCGCACGCCCGCCACCACCAACCTTGCTGCTGCCGCTG
CTGCTGACGCGCCGCCGTCGCCGCAGCAGCGGCGCGCGCGTCTGTCGATG
CTGGCGGCGCCGTTCCGCGGGCTGCGCAGCGCGGGAGAGCGCGCGGCGCG
CTTTCTCTACCGTAGAGCGCTGCTGCCGGTGGCGTCGCCGCTGGTCGCGC
TCTCGCTGCACCCCATCGTGTACAGCGGAGCGTTCTGGCGCACGGGGCTC
CAGAAGGCGTGGTTCGACAAGGCGGGAGTGGGTCTGGAGGTGGTGAACCG
GTACCGCTGGCCCTCGCTGGTGCGGCGCTGGGACAGGGGGCTGGCGCTGT
TTGTGCTGTCGCAGAGCCGCTGGAGCAAGGTGGCGCACTCAGACACCCCC
GAGGAGCCCCTGGTTGCAGCGCTCAAGCGCAAGGCGGACGCCGGCATGCG
CATCATCCTCATCCACGGCGCGCAGGACCCGCTAGTGAGCGCTGCCTCAT
CGCGCGCGCTCAAGTCCCTCATACCCGCCATCGACCTCGTGGAGCTGCAG
AATTGCGGCCACGTGCCGCACGAGGAGATGCCGGATGCGTTTCTGGACGT
GCTCGCGGCGCGCCTCTCGCCTCAGCGCTCAACGACGGCGGCGCCGCAGT
CGTGA
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protein sequence of jgi.p|Trimin1|348945

>Trimin1|348945|estExt_Genemark1.C_Ctg_330051 ID=Trimin1|348945|estExt_Genemark1.C_Ctg_330051|Name=jgi.p|Trimin1|348945|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=515bp
MCRNRSSKSSTTDSNSSGLIDGASVLACAVAPVAEGTTSVIAESAMNRGD
YEIPHTVLIPGSNRVVPIGYKRRMTLLEMVAVQAAAAALVLLRTTWGINL
RYGGFTRRPLSSFLNLFIVAALSRLLFVPFQLIYRELFLAPRLNKPEDVP
PSTSSQFREAAGIKVHLLHESPPSPETSNTVLHFNHGFGACSLSWEPVLA
RLARSLNARALAHDMPGFGLTQRVPLRRTAGVYTLQKNAEITRALLKPGD
SGSDSEGGHKHTILFGHSMGGVTAALAAVGAEFEPRYTTLVLVAPALTAV
TRTPATTNLAAAAAADAPPSPQQRRARLSMLAAPFRGLRSAGERAARFLY
RRALLPVASPLVALSLHPIVYSGAFWRTGLQKAWFDKAGVGLEVVNRYRW
PSLVRRWDRGLALFVLSQSRWSKVAHSDTPEEPLVAALKRKADAGMRIIL
IHGAQDPLVSAASSRALKSLIPAIDLVELQNCGHVPHEEMPDAFLDVLAA
RLSPQRSTTAAPQS*
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mRNA from alignment at Contig_33:339312..341978+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5940 ID=mRNA_5940|Name=jgi.p|Trimin1|348945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2667bp|location=Sequence derived from alignment at Contig_33:339312..341978+ (Tribonema minus UTEX_B_3156 )
GCTCGCTGTCCAGCTCGGCCGCTGCTCTCAACGCCCTGGGCGGGCAACAC GTGTTGAAGCAGCTTAAGCGCTGTTCCACACGGAGCAGCGGCGTCGGCAG CAGTGGTCCCATGTGCCGCAACAGGAGCAGCAAGAGCAGCACCACCGACA GCAACAGTTCTGGCTTGATCGATGGCGCCTCCGTGCTAGCCTGCGCGGTG GCTCCGGTAGCTGAGGGAACGACCAGCGTGATCGCGGAGAGCGCCATGAA TAGAGGCGACTACGAGATCCCCCACACGGTGCTGATACCCGGCAGCAACA GGGTAGTTCCCATAGGCTACAAGAGGAGAATGACGCTGCTGGAGATGGTG GCTGTTCAAGCAGCTGCAGCTGCTCTCGTCCTCTTACGCACCACCTGGGG CATCAACCTCCGCTACGGCGGCTTCACCCGGCGCCCCCTGTCCTCCTTCT TGAACTTATTCATCGTCGCAGCCCTGTCCAGACTGCTCTTCGTGCCTTTC CAGCTCATTTACAGGGAGCTTTTCCTGGCCCCGCGCCTCAACAAGCCCGA GGACGTCCCCCCCTCCACCTCCAGCCAGTTCCGCGAGGCAGCGGGCATCA AAGTCCACCTCCTTCACGAGTCCCCCCCCTCCCCCGAAACCTCCAACACG GTGCTGCACTTCAACCACGGCTTCGGCGCGTGCAGCCTCTCCTGGGAGCC CGTGCTGGCGCGCCTGGCGCGGTCGCTCAACGCGCGCGCCCTCGCCCATG ACATGCCGGGCTTCGGCCTCACGCAGCGTGTGCCGCTGCGCCGCACCGCC GGCGTGTACACGCTGCAGAAGAACGCCGAGATCACACGCGCGCTGCTCAA GCCCGGCGACAGCGGCAGTGACAGCGAGGGCGGACACAAACACACCATCC TCTTCGGGCACAGCATGGGCGGCGTGACGGCGGCGCTGGCGGCGGTCGGC GCGGAGTTCGAGCCGCGATACACGACGCTGGTGCTGGTGGCGCCGGCGCT GACGGCCGTCACGCGCACGCCCGCCACCACCAACCTTGCTGCTGCCGCTG CTGCTGACGCGCCGCCGTCGCCGCAGCAGCGGCGCGCGCGTCTGTCGATG CTGGCGGCGCCGTTCCGCGGGCTGCGCAGCGCGGGAGAGCGCGCGGCGCG CTTTCTCTACCGTAGAGCGCTGCTGCCGGTGGCGTCGCCGCTGGTCGCGC TCTCGCTGCACCCCATCGTGTACAGCGGAGCGTTCTGGCGCACGGGGCTC CAGAAGGCGTGGTTCGACAAGGCGGGAGTGGGTCTGGAGGTGGTGAACCG GTACCGCTGGCCCTCGCTGGTGCGGCGCTGGGACAGGGGGCTGGCGCTGT TTGTGCTGTCGCAGAGCCGCTGGAGCAAGGTGGCGCACTCAGGTCGGTGC GCACCACAATTAGGGTTTGCAGCTGCGTTCATTAGTGCCGCGCGTGCAAC AGCCTCGCACAGGCCTGTGAGTATGCGTGTGTGTGTCAAATGTGCGATGG CCTCTGCGTACAGCAGGTACCTGAAGTACGTGTGCTGGTCAAGTACCTCA ATGCACCTCACATATCTGAAGTGGAAGTTACTGTAAGGAAGTTCCATCCG TCAGGCCACACCAAGAGGACGCTAGGCTGTATTCAGCAATGCAATGGCAG CACGACTTTGGAGCAATACGCCTTTGGAGAGGCTGTGCATAGCTGTACAT CTGCTGGTGCATGCCGTTGTCTCGCTGGCGTTGTGAACTGTCGAGTGACT GATGATCGATCAGCTGCCAGGGATCTTACTCACATGTTATCATTGTGCTG ATCAACTCAACACATAACTGCACTGCACCCTATAGGCCTGTGTCGAGTTC CTGGAAGCATGTTGAGCTGAAGCAAAACATATATACTTGTCCCTGCTCAT GAGGACACACCATGTTAATCGCCAAATGATCAGCAGTCGGCGGTTTCGAG TGTAGTCATGCATTCATAGTTTGTGTAGGCTATTACGAAGAAGGGTTGTC TACGCTAACGTCGCCTCTGGGCCACCCAGTGCATATCACATGCATACACC CCATGCACACCCATACGCCTAGTGGCTTTGTTGGTGACTGCACGTGTGAC ACCCCCCAACAACACACAGTCAAGACATCCAGGCCATCATGAGGTGCATT GCCCGGCTCATGCATGCCGCAAGCCTTGTGAGCAGCACAGCGCATGCGCC GCGCCACCGCCCACATATTCCTACCCGTTGCTGACACGCATGCATACGTT CTGATCTTGCTGCGTGCATCTGTCTGATCGCTCGCCCCCCTCCCGCCCCG CATCGCTCCCCTTTCAACACTCGCGTGCCCTATTCATACTGTGCTCACAG CTCGCATCAACCACCCCCCCCCCCCCTGCCCCCACCCCCAAAAACTCCCC TCAGACACCCCCGAGGAGCCCCTGGTTGCAGCGCTCAAGCGCAAGGCGGA CGCCGGCATGCGCATCATCCTCATCCACGGCGCGCAGGACCCGCTAGTGA GCGCTGCCTCATCGCGCGCGCTCAAGTCCCTCATACCCGCCATCGACCTC GTGGAGCTGCAGAATTGCGGCCACGTGCCGCACGAGGAGATGCCGGATGC GTTTCTGGACGTGCTCGCGGCGCGCCTCTCGCCTCAGCGCTCAACGACGG CGGCGCCGCAGTCGTGA
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Coding sequence (CDS) from alignment at Contig_33:339312..341978+

>mRNA_5940 ID=mRNA_5940|Name=jgi.p|Trimin1|348945|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1545bp|location=Sequence derived from alignment at Contig_33:339312..341978+ (Tribonema minus UTEX_B_3156 )
ATGTGCCGCAACAGGAGCAGCAAGAGCAGCACCACCGACAGCAACAGTTC
TGGCTTGATCGATGGCGCCTCCGTGCTAGCCTGCGCGGTGGCTCCGGTAG
CTGAGGGAACGACCAGCGTGATCGCGGAGAGCGCCATGAATAGAGGCGAC
TACGAGATCCCCCACACGGTGCTGATACCCGGCAGCAACAGGGTAGTTCC
CATAGGCTACAAGAGGAGAATGACGCTGCTGGAGATGGTGGCTGTTCAAG
CAGCTGCAGCTGCTCTCGTCCTCTTACGCACCACCTGGGGCATCAACCTC
CGCTACGGCGGCTTCACCCGGCGCCCCCTGTCCTCCTTCTTGAACTTATT
CATCGTCGCAGCCCTGTCCAGACTGCTCTTCGTGCCTTTCCAGCTCATTT
ACAGGGAGCTTTTCCTGGCCCCGCGCCTCAACAAGCCCGAGGACGTCCCC
CCCTCCACCTCCAGCCAGTTCCGCGAGGCAGCGGGCATCAAAGTCCACCT
CCTTCACGAGTCCCCCCCCTCCCCCGAAACCTCCAACACGGTGCTGCACT
TCAACCACGGCTTCGGCGCGTGCAGCCTCTCCTGGGAGCCCGTGCTGGCG
CGCCTGGCGCGGTCGCTCAACGCGCGCGCCCTCGCCCATGACATGCCGGG
CTTCGGCCTCACGCAGCGTGTGCCGCTGCGCCGCACCGCCGGCGTGTACA
CGCTGCAGAAGAACGCCGAGATCACACGCGCGCTGCTCAAGCCCGGCGAC
AGCGGCAGTGACAGCGAGGGCGGACACAAACACACCATCCTCTTCGGGCA
CAGCATGGGCGGCGTGACGGCGGCGCTGGCGGCGGTCGGCGCGGAGTTCG
AGCCGCGATACACGACGCTGGTGCTGGTGGCGCCGGCGCTGACGGCCGTC
ACGCGCACGCCCGCCACCACCAACCTTGCTGCTGCCGCTGCTGCTGACGC
GCCGCCGTCGCCGCAGCAGCGGCGCGCGCGTCTGTCGATGCTGGCGGCGC
CGTTCCGCGGGCTGCGCAGCGCGGGAGAGCGCGCGGCGCGCTTTCTCTAC
CGTAGAGCGCTGCTGCCGGTGGCGTCGCCGCTGGTCGCGCTCTCGCTGCA
CCCCATCGTGTACAGCGGAGCGTTCTGGCGCACGGGGCTCCAGAAGGCGT
GGTTCGACAAGGCGGGAGTGGGTCTGGAGGTGGTGAACCGGTACCGCTGG
CCCTCGCTGGTGCGGCGCTGGGACAGGGGGCTGGCGCTGTTTGTGCTGTC
GCAGAGCCGCTGGAGCAAGGTGGCGCACTCAGACACCCCCGAGGAGCCCC
TGGTTGCAGCGCTCAAGCGCAAGGCGGACGCCGGCATGCGCATCATCCTC
ATCCACGGCGCGCAGGACCCGCTAGTGAGCGCTGCCTCATCGCGCGCGCT
CAAGTCCCTCATACCCGCCATCGACCTCGTGGAGCTGCAGAATTGCGGCC
ACGTGCCGCACGAGGAGATGCCGGATGCGTTTCTGGACGTGCTCGCGGCG
CGCCTCTCGCCTCAGCGCTCAACGACGGCGGCGCCGCAGTCGTGA
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