Trimin1|348940|estExt_Genemark1.C_Ctg_330046 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348940
Unique NameTrimin1|348940|estExt_Genemark1.C_Ctg_330046
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length368
Homology
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: A0A836CEI2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI2_9STRA)

HSP 1 Score: 683 bits (1763), Expect = 1.620e-247
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query:    1 MSVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMDSSVVFFHMIVRGKILEFMEIRLYEVLKIGTLYTKAQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPGEPNFKFSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTAIDLCILSTCGNLANMMLCNLLGSGSLQKACAXXXXXXXXXXXXXXXXWRETRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSVTAASARTERLAAAATGV 367
            MSVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMDSSVVFFHMIVRGKILEFMEIRLYEVLKIGTLYTKAQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPGEPNFKFSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTAIDLCILSTCGNLANMMLCNLLGSGSLQKACAXXXXXXXXXXXXXXXXWRETRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSVTAASARTERLAAAATGV
Sbjct:    1 MSVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMDSSVVFFHMIVRGKILEFMEIRLYEVLKIGTLYTKAQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPGEPNFKFSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTAIDLCILSTCGNLANMMLCNLLGSGSLQKACAXXXXXXXXXXXXXXXXWRETRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSVTAASARTERLAAAATGV 367          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: A0A835YMB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB6_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.080e-74
Identity = 123/198 (62.12%), Postives = 142/198 (71.72%), Query Frame = 0
Query:  163 AQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPGEPNFKFSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTAIDLCILSTCGNLANMMLCNLLGSGSLQKACAXXXXXXXXXXXXXXXXWRETRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSVTAASARTERL 360
            +Q  FP+ TCVTQGCLLSV+GDA+SQ I +R EP EPG    ++  KRF IAG AGC+FDG  IP WYG LHG+VP   RFRGL +TAIDL +LSTCGN ANMM  NLL  GSL KA                  WRETR+K+ GVIL+DLR+FPAYDI++F+FVP+HVQALCTA VCCLWNCYLSSVTA S     L
Sbjct:  438 SQTCFPKTTCVTQGCLLSVVGDAISQAISQRQEPPEPGARPIRYCWKRFAIAGMAGCLFDGLAIPVWYGYLHGIVPNGLRFRGLALTAIDLALLSTCGNFANMMFRNLLAGGSLTKA------------------WRETRSKITGVILVDLRIFPAYDILMFTFVPRHVQALCTAAVCCLWNCYLSSVTAESTHAHPL 617          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: W7U6G1_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6G1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.300e-14
Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 0
Query:  157 GTLYTKAQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPGEPNFK-FSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTAIDLCILSTC-GNLANMMLCNLLGSGSLQKACAXXXXXXXXXXXXXXXXWRETRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSVT 351
            G  Y+      P    +  G L+  +GD +SQ I   A+  +    +++  S +R   AG AG VF+G ++P WY LLH L PG    + +    +  C+   C GN A M +  +L   S   A                   +  R  + GV++ D +++P YD++ F+ +P+H+  L T  +  +W  YLS VT
Sbjct:   92 GKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDA------------------EQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVT 270          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: A0A0L0HA38_SPIPD (Transmembrane protein 107 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HA38_SPIPD)

HSP 1 Score: 65.1 bits (157), Expect = 3.360e-9
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 0
Query:    6 LVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMDSS 130
            L+PARF   + H + T  +F T+   +   +   D  S QYA Y N+ T     LA+S++CFAIEL G  SG+T    G        H AG+  ++  VL  W    Y +IF F   +PAL+++ 
Sbjct:    9 LLPARFLTTIAHFITTLMVFFTKDIYVRAALPIGD--SSQYASYDNSLTAA---LALSWVCFAIELFGLFSGMTTFNQGAGTLYLWAHTAGIIALIFFVLEGWHYMIYWYIFTFCSALPALIETG 128          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: UPI000CD5DBE1 (transmembrane protein 107 isoform X5 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD5DBE1)

HSP 1 Score: 62.0 bits (149), Expect = 9.480e-8
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMD 128
            ++ +LVPARF  L  HLV    IF +R   +   + P D +  +Y   ++ +T L V L+V+   FAIELAGF SG+++      L     H +   C+   V   W    Y F+F F   +PALM+
Sbjct:   47 AIHSLVPARFLTLTAHLVIVITIFWSRDNNVRACL-PLDFSQDEY---RSQDTQLVVALSVTLGLFAIELAGFFSGVSMFNSTQSLLSLAAHCSASVCLSFFVFQQWECWTYWFVFTFCSALPALME 169          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: UPI0003EADA09 (transmembrane protein 107 isoform X2 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0003EADA09)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-7
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMD 128
            +V +LVPARF  L  HLV    IF +R   +   +    T  +    Y + +T L V L+V+   FAIELAGF SG+++      L     H +   C+   V   W    Y +IFGF   +PA+++
Sbjct:    3 AVSSLVPARFLTLTAHLVIVITIFWSRENNVLACLPLEYTQEE----YNSQDTQLVVALSVTLGMFAIELAGFFSGVSMFNSSQGLLSLACHCSASVCLSFFVFQKWECWTYWYIFGFCSALPAVVE 125          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: A0A1S3RYM8_SALSA (Transmembrane protein 107 n=17 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3RYM8_SALSA)

HSP 1 Score: 60.1 bits (144), Expect = 1.890e-7
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMD 128
            +V +LVPARF  L  HLV    IF +R   +   + P D    QY      +T L V L+V+   FAIELAGF SG+++      L  T  H +    +L  +   W  E Y +I  F  ++PA ++
Sbjct:    3 AVSSLVPARFLTLTAHLVIVITIFWSRENNVEACL-PLDFTQDQY---DKEDTKLVVALSVTMGLFAIELAGFFSGVSMFNCTQGLLSTAAHASASVALLFFLFEQWACEIYWWILAFCSVLPAFVE 125          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: UPI0018643377 (transmembrane protein 107-like isoform X2 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018643377)

HSP 1 Score: 60.1 bits (144), Expect = 1.890e-7
Identity = 43/127 (33.86%), Postives = 62/127 (48.82%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMD 128
            +V +LVPARF  L  HLV    IF +R   +   +    T  +    +   +T L V L+V+   FA+ELAGF SG+++      L   V H +   C+   V   W    Y FIF F   +PAL++
Sbjct:    3 AVHSLVPARFLTLTAHLVIVITIFWSRENNVRACLPLEFTQEE----FNAQDTQLVVALSVTLGLFAVELAGFFSGVSMFNSSQSLLSLVAHCSASICLSFFVFQKWECWTYWFIFAFCSAIPALVE 125          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: UPI0010A08AD5 (transmembrane protein 107 isoform X4 n=3 Tax=Polypteridae TaxID=8289 RepID=UPI0010A08AD5)

HSP 1 Score: 59.3 bits (142), Expect = 3.590e-7
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFF-VLVPALMD 128
            ++ +LVPARF  L+ HLV    IF +R   +   +  + T       Y N +T L V L+V+   FAIELAGF SG+++      L   V H +    +   V   W    Y +IFGF  V +PAL++
Sbjct:    3 AISSLVPARFLTLIAHLVIVITIFWSRENNVLACLPLQYTQQD----YNNKDTELIVALSVTLGMFAIELAGFFSGISMFNNSQSLLSLVAHCSAAVTLSFFVFRKWECWTYWYIFGFCSVPLPALIE 126          
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Match: A0A4W6FTF6_LATCA (Transmembrane protein 107 n=33 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A4W6FTF6_LATCA)

HSP 1 Score: 58.9 bits (141), Expect = 4.800e-7
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 0
Query:    2 SVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQNNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACVLAMVLNVWTAEAYKFIFGFFVLVPALMD 128
            +V +LVPARF  ++ HLV    IF +R   +   + P D   +QY    N +  L V LAV+   FAIELAGF SG+++      L  T +H +    +L  +   W  + Y +I     ++PA ++
Sbjct:    3 AVNSLVPARFLTIIAHLVIVITIFWSRENNIKACL-PLDFTQEQY---DNEDKKLVVALAVTLGLFAIELAGFFSGVSMFNCSQGLLSTGVHASASVALLFFLFEQWECDIYWWILAICSVLPAFVE 125          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348940 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEI2_9STRA1.620e-247100.00Transmembrane protein 107 n=1 Tax=Tribonema minus ... [more]
A0A835YMB6_9STRA1.080e-7462.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U6G1_9STRA4.300e-1428.43Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A0L0HA38_SPIPD3.360e-935.20Transmembrane protein 107 n=2 Tax=Spizellomyces Ta... [more]
UPI000CD5DBE19.480e-834.65transmembrane protein 107 isoform X5 n=2 Tax=Param... [more]
UPI0003EADA091.380e-733.86transmembrane protein 107 isoform X2 n=2 Tax=Lepis... [more]
A0A1S3RYM8_SALSA1.890e-734.65Transmembrane protein 107 n=17 Tax=Protacanthopter... [more]
UPI00186433771.890e-733.86transmembrane protein 107-like isoform X2 n=2 Tax=... [more]
UPI0010A08AD53.590e-735.16transmembrane protein 107 isoform X4 n=3 Tax=Polyp... [more]
A0A4W6FTF6_LATCA4.800e-733.07Transmembrane protein 107 n=33 Tax=Euacanthomorpha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 289..348
e-value: 8.9E-10
score: 38.6
IPR029248Transmembrane protein 107PFAMPF14995TMEM107coord: 6..129
e-value: 7.9E-16
score: 58.5
IPR029248Transmembrane protein 107PANTHERPTHR34341TRANSMEMBRANE PROTEIN 107coord: 3..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:313462..318858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348940mRNA_5934Tribonema minus UTEX_B_3156 mRNAContig_33 313462..318858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348940|estExt_Genemark1.C_Ctg_330046 ID=Trimin1|348940|estExt_Genemark1.C_Ctg_330046|Name=jgi.p|Trimin1|348940|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp
MSVQTLVPARFSCLMLHLVATSAIFHTRGTLLSVTIDPRDTASQQYAVYQ
NNETTLFVLLAVSYICFAIELAGFASGLTLHQIGLHLCCTVLHLAGLACV
LAMVLNVWTAEAYKFIFGFFVLVPALMDSSVVFFHMIVRGKILEFMEIRL
YEVLKIGTLYTKAQASFPRATCVTQGCLLSVLGDALSQEIYRRAEPQEPG
EPNFKFSKKRFLIAGAAGCVFDGFVIPTWYGLLHGLVPGHTRFRGLVMTA
IDLCILSTCGNLANMMLCNLLGSGSLQKACANMMLRNLLGSGSLQKAWRE
TRAKVLGVILLDLRLFPAYDIIVFSFVPKHVQALCTAFVCCLWNCYLSSV
TAASARTERLAAAATGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22
IPR029248TMEM107