Trimin1|348937|estExt_Genemark1.C_Ctg_330043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348937
Unique NameTrimin1|348937|estExt_Genemark1.C_Ctg_330043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length615
Homology
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A835YZB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZB1_9STRA)

HSP 1 Score: 990 bits (2559), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0
Query:    1 MGPGPPGSAISFVGGPVGMPQPPGSSGAPTATGAKPAVGDGSRAPPAHDLLHHPVLEQALDRRAAAGLPMGFPEGLGQNTGLRRGLEFPDSRTCVQYLRDYMVGIGKRLATDQTGGKSKRFKCSGNGCPFIVNVTKTRQGIWRVTNVIPEHSEECDGVPIGSRPPIILXXXXXXXXXXXXXXXXXXXXXXPKPGAAAAKKRLRVEGKAGEMAPGLAAIQQLPAPPGVGGAVVKLPQQGEGAAVRKRVTLMSWNVWKMEGVPALFPQRAAAFKALLQTYAPDVLCVQELHPVTSAAIRQALLTHASTADGGAETPPPPPTPVAMPILPTMPQVDPSKPPQLGLPXXXXXXXXXXXXXXXAGAPLQLGAPPPMQLPMQPQQQMVVPALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAALATHTFPFIHGNHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            MGPGPPGSAISFVGGPVGMPQPPGSSGAPTATGAKPAVGDGSRAPPAHDLLHHPVLEQALDRRAAAGLPMGFPEGLGQNTGLRRGLEFPDSRTCVQYLRDYMVGIGKRLATDQTGGKSKRFKCSGNGCPFIVNVTKTRQGIWRVTNVIPEHSEECDGVPIGSRPPIILXXXXXXXXXXXXXXXXXXXXXXPKPGAAAAKKRLRVEGKAGEMAPGLAAIQQLPAPPGVGGAVVKLPQQGEGAAVRKRVTLMSWNVWKMEGVPALFPQRAAAFKALLQTYAPDVLCVQELHPVTSAAIRQALLTHASTADGGAETPPPPPTPVAMPILPTMPQVDPSKPPQLGLPXXXXXXXXXXXXXXXAGAPLQLGAPPPMQLPMQPQQQMVVPALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAALATHTFPFIHGNHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI
Sbjct:    1 MGPGPPGSAISFVGGPVGMPQPPGSSGAPTATGAKPAVGDGSRAPPAHDLLHHPVLEQALDRRAAAGLPMGFPEGLGQNTGLRRGLEFPDSRTCVQYLRDYMVGIGKRLATDQTGGKSKRFKCSGNGCPFIVNVTKTRQGIWRVTNVIPEHSEECDGVPIGSRPPIILXXXXXXXXXXXXXXXXXXXXXXPKPGAAAAKKRLRVEGKAGEMAPGLAAIQQLPAPPGVGGAVVKLPQQGEGAAVRKRVTLMSWNVWKMEGVPALFPQRAAAFKALLQTYAPDVLCVQELHPVTSAAIRQALLTHASTADGGAETPPPPPTPVAMPILPTMPQVDPSKPPQLGLPXXXXXXXXXXXXXXXAGAPLQLGAPPPMQLPMQPQQQMVVPALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGIFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAALATHTFPFIHGNHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A821GAD6_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821GAD6_9BILA)

HSP 1 Score: 96.3 bits (238), Expect = 2.280e-18
Identity = 69/204 (33.82%), Postives = 96/204 (47.06%), Query Frame = 0
Query:  453 IFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVIT-------------ILAALATHTFP----------------------FIHG-------NHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            I++N+ LF +   G  ++ + E P R+L + +LKI  T ++ T             IL A A +T+                        +H         H  V  +GD NE+FHP R+L +A + DCFSAL +PA  THP RPS PKE+   D  LDW+     AR +LA+V+RD    G          SDH PV+  YEI
Sbjct:   66 IYWNSNLFDMVEYGIVDIGMKE-PLRRLFWVLLKITITPKLTTEEQMKSEKITTQQILVATAHYTWEGHVEEHTTNINLRKQQAQRTTTALHALQSKFGDPHLAVLFMGDLNENFHPRRILREAGFIDCFSALRLPALPTHPQRPSAPKEDILGDCPLDWITQNNYARPILATVLRDLVCTGG------YSVSDHCPVMCIYEI 262          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A817M2X2_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817M2X2_9BILA)

HSP 1 Score: 87.8 bits (216), Expect = 2.520e-15
Identity = 60/177 (33.90%), Postives = 86/177 (48.59%), Query Frame = 0
Query:  453 IFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVIT-------------ILAALATHTFP----------------------FIHG-------NHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRD 587
            I++N+ LF +   G  ++ + E P R+L + +LKI  T ++ T             IL A A +T+                        +H         H  V  +GD NE+FHP R+L +A + DCFSAL +PA  THP RPS PKE+   D  LDW+     AR +LA+V+RD
Sbjct:   66 IYWNSNLFDMVEYGIVDIGMKE-PLRRLFWVLLKITITPKLTTEEQMKSEKITTQQILVATAHYTWEGHVEEHTTNINLRKQQAQRTTTALHALQSKFGDPHLAVLFMGDLNENFHPRRILREAGFIDCFSALRLPALPTHPQRPSAPKEDILGDCPLDWITQNNYARPILATVLRD 241          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A821XJI7_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821XJI7_9BILA)

HSP 1 Score: 89.7 bits (221), Expect = 4.820e-15
Identity = 50/117 (42.74%), Postives = 65/117 (55.56%), Query Frame = 0
Query:  499 ALATHTFPFIHGN-HNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            A A H      G+ H  +  +GD NE+FHP R+L +A + DCFSAL +P   THP RPS PKE+   D  LDW+     AR +LA+V+R+    G          SDH PV+  YEI
Sbjct:  165 ATALHALQSKFGDPHLAMLFMGDLNENFHPRRILHEAGFIDCFSALRLPCLPTHPQRPSTPKEDFLGDCPLDWITQNNYARPILANVLRNLICTGG------YSVSDHCPVMCIYEI 275          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A821DD16_9BILA (Hypothetical protein n=9 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821DD16_9BILA)

HSP 1 Score: 89.7 bits (221), Expect = 6.550e-15
Identity = 50/117 (42.74%), Postives = 65/117 (55.56%), Query Frame = 0
Query:  499 ALATHTFPFIHGN-HNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            A A H      G+ H  +  +GD NE+FHP R+L +A + DCFSAL +P   THP RPS PKE+   D  LDW+     AR +LA+V+R+    G          SDH PV+  YEI
Sbjct:  165 ATALHALQSKFGDPHLAMLFMGDLNENFHPRRILREAGFIDCFSALRLPCLPTHPQRPSTPKEDFLGDCPLDWITQNNYARPILANVLRNLICTGG------YSVSDHCPVMCIYEI 275          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A800LTS4_9BACT (Endonuclease n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A800LTS4_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 1.240e-13
Identity = 60/191 (31.41%), Postives = 88/191 (46.07%), Query Frame = 0
Query:  451 GGIFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAALATHTF------------PFIHGNHN-------------PVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHP--KEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            G I++N   F     G E++ + E   R+L +  LK+    R  T+    A +T+            P I                  P   +GD N+  HP R++ +A Y +CFSALG+P   THPA P+           +T+DW+F+   ARAV A V   +       G+VA  PSDH+PV+A YE+
Sbjct:   72 GTIYWNRTYFSEVEHGIEDVGMLEE-QRRLFWVRLKLTGQDR--TVFVGTAHYTYQGHPLERDTGQSPRIEQTRRTIEAMQRLVFEDEPAVFMGDLNDPVHPVRMMHEAGYVNCFSALGIPTVPTHPAYPTTNILPGARSTQQTIDWIFANKHARAVAAQVPHCYH------GDVA--PSDHWPVLAVYEV 251          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A2A5DLE6_9BACT (Endonuclease n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A5DLE6_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 1.020e-12
Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 0
Query:  486 KIEATIRVITILAALATHTFPFIHGNHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERP--DRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            ++E T   +T L  L T        +  PVF +GD N+  HP R+L  A Y++CFS LGV +P T P+ P+       P    T+DW+F+  +AR + A V   +           + PSDH+PV+A YEI
Sbjct:  137 RLEETRETVTALRRLVT--------DDEPVFFMGDLNDSIHPLRILYDAGYKNCFSELGVVSPPTFPSMPTAGPVTGIPRITATIDWLFANEKARPIAAQVPHCYHE--------NLTPSDHWPVLAVYEI 251          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A8I2K846_9BACT (Endonuclease n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A8I2K846_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 1.060e-12
Identity = 60/189 (31.75%), Postives = 90/189 (47.62%), Query Frame = 0
Query:  453 IFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAA----------LATHTFPFIHGNHN-------------PVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPS--HPKEE--ERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            IF+ T+ F     GAEE+ +    +RKL +  LK+  T R + I  A          L T   P I  + N             P F  GD N+  +P  +L +A Y +CF+AL +P P T P+ P+  +P +      ++T DW+ +   +R ++A V   +       GE A  PSDH+PV+A YEI
Sbjct:   74 IFWKTRFFENIEYGAEEIGILAE-NRKLFWIRLKLRGTDRTVFISTAHFTYQEHHDELKTGLSPRIKQSRNTVLMLKKLVINTEPAFFAGDLNDTVNPLLILHEAGYDNCFTALSIPCPSTFPSYPTGQYPSDNYVRFLNQTRDWIVANQYSRPIIAQVPHCYY------GETA--PSDHWPVLAVYEI 253          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A818T5S1_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818T5S1_9BILA)

HSP 1 Score: 82.0 bits (201), Expect = 1.430e-12
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 0
Query:  499 ALATHTFPFIHGN-HNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAVHPSDHFPVVACYEI 614
            A A H      G+ H  +  +GD NE+FHP R+L +A + DCFSAL +P   THP RPS PKE+   D  LDW+     AR +LA+V+R+    G          SDH P    + +
Sbjct:  151 ATALHALQSKFGDPHLAMLFMGDLNENFHPRRILHEAGFIDCFSALRLPCLPTHPQRPSTPKEDFLGDCPLDWITQNNYARPILANVLRNLICTGG------YSVSDHCPKSTIFNL 261          
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Match: A0A818X0F9_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818X0F9_9BILA)

HSP 1 Score: 69.7 bits (169), Expect = 1.210e-9
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:  499 ALATHTFPFIHGN-HNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHTHPARPSHPKEEERPDRTLDWV 571
            A A H      G+ H  +  +GD NE+FHP R+L +A + DCFSAL +P   THP RPS PKE+   D  LDW+
Sbjct:  165 ATALHALQSKFGDPHLAMLFMGDLNENFHPRRILREAGFIDCFSALRLPCLPTHPQRPSTPKEDFLGDCPLDWI 238          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348937 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835YZB1_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A821GAD6_9BILA2.280e-1833.82Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A817M2X2_9BILA2.520e-1533.90Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A821XJI7_9BILA4.820e-1542.74Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A821DD16_9BILA6.550e-1542.74Hypothetical protein n=9 Tax=Rotaria sp. Silwood1 ... [more]
A0A800LTS4_9BACT1.240e-1331.41Endonuclease n=1 Tax=candidate division Zixibacter... [more]
A0A2A5DLE6_9BACT1.020e-1235.88Endonuclease n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A8I2K846_9BACT1.060e-1231.75Endonuclease n=1 Tax=Candidatus Aminicenantes bact... [more]
A0A818T5S1_9BILA1.430e-1239.32Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A818X0F9_9BILA1.210e-947.30Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 454..612
e-value: 3.4E-12
score: 48.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 242..316
e-value: 1.5E-6
score: 30.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 246..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:296138..300725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348937mRNA_5931Tribonema minus UTEX_B_3156 mRNAContig_33 296138..300725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348937|estExt_Genemark1.C_Ctg_330043 ID=Trimin1|348937|estExt_Genemark1.C_Ctg_330043|Name=jgi.p|Trimin1|348937|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=615bp
MGPGPPGSAISFVGGPVGMPQPPGSSGAPTATGAKPAVGDGSRAPPAHDL
LHHPVLEQALDRRAAAGLPMGFPEGLGQNTGLRRGLEFPDSRTCVQYLRD
YMVGIGKRLATDQTGGKSKRFKCSGNGCPFIVNVTKTRQGIWRVTNVIPE
HSEECDGVPIGSRPPIILPPPRTNRKTAADGEGGGGAKRGPKPGAAAAKK
RLRVEGKAGEMAPGLAAIQQLPAPPGVGGAVVKLPQQGEGAAVRKRVTLM
SWNVWKMEGVPALFPQRAAAFKALLQTYAPDVLCVQELHPVTSAAIRQAL
LTHASTADGGAETPPPPPTPVAMPILPTMPQVDPSKPPQLGLPPLPPPQQ
QQQPLPPPAGAPLQLGAPPPMQLPMQPQQQMVVPALGGTSPPPPASAALN
NMAAFNAPAVPPPGAAMAAAAAAAAAAAVADRHVKGEETAAGDEAAAQQE
GGIFYNTKLFILHAAGAEELNLPEHPHRKLHYCVLKIEATIRVITILAAL
ATHTFPFIHGNHNPVFLLGDFNEDFHPPRLLSQAMYQDCFSALGVPAPHT
HPARPSHPKEEERPDRTLDWVFSTGQARAVLASVVRDFRVPGSPPGEVAV
HPSDHFPVVACYEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf