Trimin1|348934|estExt_Genemark1.C_Ctg_330037 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348934
Unique NameTrimin1|348934|estExt_Genemark1.C_Ctg_330037
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length206
Homology
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 3.100e-139
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAGRPATP 205
            MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAGRPATP
Sbjct:    1 MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAGRPATP 205          
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.870e-37
Identity = 76/192 (39.58%), Postives = 114/192 (59.38%), Query Frame = 0
Query:    7 SRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDE---ALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195
            SR  +  +V+ GGA    TA++     +A A  Q+ E+  A +M+CK V +P+ +Y K  QFD+ARTN NYITR   ++K I   I++   + DD    + +E+A D+A   ++ F+N+DSS+YT+IFIP   +G LP G++KY  QA  +YD    +LD +I L P + +  A     A+   LP FLFKE
Sbjct:   67 SRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKE 258          
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.890e-36
Identity = 78/195 (40.00%), Postives = 115/195 (58.97%), Query Frame = 0
Query:    1 MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195
            M  A  SR  +  +V+ GGA    TA++     +A A  Q+ E+  A +M+CK V +P+ +Y K  QFD+ARTN NYITR   ++K I   I++   + +D   +E+A D+A   ++ F+N+DSS+YT+IFIP   DG LP G++KY  QA  +YD    +LD +I L P + +  A     A+   LP FLFKE
Sbjct:   63 MSLAGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKE 257          
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Match: A0A7S0BNM4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNM4_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 6.620e-15
Identity = 52/150 (34.67%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   35 AAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEAR 184
            AA      + ++  +  C+ V+ P  KY +  ++D ARTN+NY TR L ++  + KV  E   I DD     E  ++ A  ++ F+  D+S+YT IFIP  E G  P+  +KY  QA +YY+Q++ ML  +++L P+D +  A  +A  R
Sbjct:   57 AATKMSPIDTSLLRICECERVMRPVRKYIEKGEWDRARTNINYCTRNLRLKTNM-KVFSE---IMDDPL---EGIEIMAELENVFTQMDASVYTPIFIPSDE-GISPE-QEKYQKQAFLYYEQAMRMLGDYLALVPQDKKVGAFREAAKR 197          
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Match: A0A2V3IGD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGD1_9FLOR)

HSP 1 Score: 77.4 bits (189), Expect = 9.420e-15
Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 0
Query:   56 LEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKEL 188
            + P  +Y     +D  RTNVNY TR L +RK + KV  +   +  D+    +A D+ A  D+T +  D+S+YT +FIP  +  S+ +   KY  QA  YY  ++  ++ F+S  P DV ERA++KA     E+
Sbjct:    1 MAPVRRYIDEGAWDKGRTNVNYCTRMLALRKNMKKVAEQ---LSGDDYY--DALDITADLDNTMTQLDASLYTPLFIPADDGVSVEQA--KYQRQASEYYSNALDYIESFLSKLPTDVLERAQSKAATAKYEI 126          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348934 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YWX6_9STRA3.100e-139100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JS60_9PHAE1.870e-3739.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL66_ECTSI2.890e-3640.00TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S0BNM4_9RHOD6.620e-1534.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IGD1_9FLOR9.420e-1535.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..35
score: 8.724135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:267669..269836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348934mRNA_5924Tribonema minus UTEX_B_3156 mRNAContig_33 267467..269997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348934|estExt_Genemark1.C_Ctg_330037 ID=Trimin1|348934|estExt_Genemark1.C_Ctg_330037|Name=jgi.p|Trimin1|348934|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=206bp
MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLM
VCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICD
DEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQ
ADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAG
RPATP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal