Trimin1|352067|estExt_Genemark1.C_Ctg_1070053 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352067
Unique NameTrimin1|352067|estExt_Genemark1.C_Ctg_1070053
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length123
Homology
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BLAST of jgi.p|Trimin1|352067 vs. uniprot
Match: A0A835ZP46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP46_9STRA)

HSP 1 Score: 226 bits (577), Expect = 7.420e-75
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MALTAVRARAATVAALRALRHPAMAVPARGVMDGFGNLNEREKGEELVHMRREEKLLLMKLRENLRTSRTELKEILGPYAAKLPGDVVEKLLDWKAKKPLYKSGEREGARQYVLSGKESRAA 122
            MALTAVRARAATVAALRALRHPAMAVPARGVMDGFGNLNEREKGEELVHMRREEKLLLMKLRENLRTSRTELKEILGPYAAKLPGDVVEKLLDWKAKKPLYKSGEREGARQYVLSGKESRAA
Sbjct:    1 MALTAVRARAATVAALRALRHPAMAVPARGVMDGFGNLNEREKGEELVHMRREEKLLLMKLRENLRTSRTELKEILGPYAAKLPGDVVEKLLDWKAKKPLYKSGEREGARQYVLSGKESRAA 122
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BLAST of jgi.p|Trimin1|352067 vs. uniprot
Match: A0A835YNK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNK7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.250e-19
Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 0 
Query:   18 ALRHPAMAVPARGVMDGFGNLNEREKGEELVHMRREEKLLLMKLRENLRTSRTELKEILGPYAAKLPGDVVEKLLDWKAK 97
            ALR PA+A+  R  M+G+ + NEREKGEELVH+R++EK LL+KLR+N + +  ELKE+LGP+  +LP DV+EKL++WK K
Sbjct:   17 ALRTPAIAISTRA-MNGYISFNEREKGEELVHIRQQEKELLLKLRQNKKIANVELKELLGPH--QLPDDVLEKLIEWKFK 93
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352067 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZP46_9STRA7.420e-75100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNK7_9STRA3.250e-1957.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:383794..384578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352067mRNA_11607Tribonema minus UTEX_B_3156 mRNAContig_107 383794..384739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352067|estExt_Genemark1.C_Ctg_1070053 ID=Trimin1|352067|estExt_Genemark1.C_Ctg_1070053|Name=jgi.p|Trimin1|352067|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=123bp
MALTAVRARAATVAALRALRHPAMAVPARGVMDGFGNLNEREKGEELVHM
RREEKLLLMKLRENLRTSRTELKEILGPYAAKLPGDVVEKLLDWKAKKPL
YKSGEREGARQYVLSGKESRAA*
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