mRNA_5961 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|164883
Unique Name	mRNA_5961
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A835YV60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV60_9STRA)

HSP 1 Score: 773 bits (1996), Expect = 2.510e-280
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDVGGGRREALREAYARMTAPTRPKGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKSVEPSGPEVPAYS 1341
            MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDVGGGRREALREAYARMTAPTRPKGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKSVEPSGPEVPAYS
Sbjct:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDVGGGRREALREAYARMTAPTRPKGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKSVEPSGPEVPAYS 447

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: D7FPJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.720e-96
Identity = 171/378 (45.24%), Postives = 236/378 (62.43%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPT-ELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 1131
            MADF  ++  RA+++ +       R+AA  QE  AA  ++R++RGK VR+       A+ +           VR   ++      E  AV+HYHA  IQ   RG+ SR+  Y HA+R+ YL E+V  G+A+RA L  HE+ + +E+        QA++Q  ++NLHHLVSTK+  GVF+SPY+  +  +PTI GV +++HLT S +DLLR RGY K  LE D+ G  R+P      RRS+QA  PYDLP + A +E    RLK +GPR F AG RV    YQRG+S GTQFL+ W+NP+L RGVPR   +++ P  +  ++LG+ P +PF  +VGGN+S VLPNG FDVI EA+++GG      GRTRRFG+PDTCDV
Sbjct:    1 MADFYGVWSCRASVLRKLDAMLDARNAARQQELQAATDIKRVYRGKTVRNDLNRKRAAMIRIASAYRGYRGRVRTQQILEEMLARERMAVYHYHALEIQGAFRGYQSRKYNYNHARRKRYLQEVVDAGDAVRAELREHEQALLEERAANKEVADQAKLQATAQNLHHLVSTKSISGVFNSPYMRNSGRMPTIRGVEVEQHLTISAKDLLRTRGYTKRGLEVDLNGQQRIPLKGLESRRSVQAQDPYDLPKKAADLEDALSRLKRVGPREFHAGNRVALAPYQRGISGGTQFLDPWRNPFLVRGVPRDQAEMQRPLNE--TTLGKFPEKPFHVSVGGNKSTVLPNGIFDVILEAEQTGGVVRTQNGRTRRFGIPDTCDV 376

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A7S2G8K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8K6_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.590e-75
Identity = 151/380 (39.74%), Postives = 224/380 (58.95%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVR---DRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 1131
            MAD+  ++KGRA + DE     ++   AA  E ++A  +QR+FRG+ +R   +  +V +  + +             AA       EA   A+FHYH   +QR  RG+ SRR  + ++ R+ Y+  +    E  RATL AH E +     +RA    +   + +++NLHHLVST    G++++PY+  TE PT  G+P++ HL   +++LLR RGYQK  L  DI G  R+P      R S+QAS  YD+P + A +EA   ++  +G R F AG+ V    Y+RG+++G+Q+ + W+NPY+ RG+P+S  +L    G+  +SLG+APA  F T+VGGN+SAVLPN RFDV+ +A+ SGG   R  G T RFGV DTCDV
Sbjct:   17 MADWYGLWKGRALVTDELVTLLKDASDAAALEYDSATRIQRLFRGQFIRAWVEEMRVASIGIERVYRGHAARLIADAAAKDSTLFEEA---AIFHYHCIMVQRAFRGYYSRRYYHDYSARKKYIDSIKSKNEDRRATLSAHREALVAADQERAAVAAKEEFEAVTQNLHHLVSTAHIAGIYNTPYM--TEQPTAMGLPLEHHLRTGVKNLLRTRGYQKRGLVTDINGSRRVPVRPAQSRLSVQASSQYDVPLEAARMEAKLDKMSHIGGRDFTAGQAVHQAPYRRGLNDGSQYTDPWRNPYMIRGIPKSQAELSQ--GR--TSLGKAPAVHFHTSVGGNKSAVLPNDRFDVMLDAESSGGVHLRHKGTTNRFGVSDTCDV 387

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A7S2W8X7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8X7_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.120e-67
Identity = 148/361 (41.00%), Postives = 215/361 (59.56%), Query Frame = 1

Query:   76 DAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQ--AVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQ-------KLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 1131
            DAAA + R+A +++QR+FRG  VR    V   A      XXXXXX   R AA +  RR+ + Q  A+FHYHA ++QR  RGF SRR  + ++ R+ YL  +   G+ALR TL  + E   +E+D+R   ++    Q+ +E LHHLVST A  GVF+SP+    E+P ++GVP++ HL    +  +R+ G Q       K  L   ++G   +P   P  R SLQAS PYD+      ++    +L  +G + F   +R +   Y+RG++EG Q+++ WQNPYL RGVP+S  +L     +  +++G+APA  F+T+VGGN+S VLPNG FDV+ +A+ SGG   R    T RFGVPD CD+
Sbjct:   12 DAAAAEGRSA-MTIQRVFRGSVVRS--TVSFRAAAAGRVXXXXXXHCCRLAAGLRRRRQEDEQELAIFHYHAIALQRTFRGFYSRRHYHDYSARKKYLETVRAKGDALRETLRQYREAQIEEEDERLRNEQAQEFQEATERLHHLVSTSATAGVFNSPFA--PEVPAVEGVPLETHLRAGAKAYVRRTGLQASSRRRQKADLSMRMSGSRNVPLPQPTKRISLQASVPYDVERDQEQMDRRLTKLGFVGGKDFTVSQRAKEATYRRGINEGCQYMDPWQNPYLVRGVPQSQAELS----QSRTTIGKAPAVHFYTSVGGNKSTVLPNGLFDVMLDAEYSGGVCQRHKANTVRFGVPDNCDI 363

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A7S2G0C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0C8_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.020e-59
Identity = 122/281 (43.42%), Postives = 179/281 (63.70%), Query Frame = 1

Query:  292 IQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGP-RHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 1131
            +QR  RG+ SR  ++  + R+ YL  + + G ALRA L  H+E + +   + A Q+ Q   + ++ENLHHLVSTK+ PGV+ SPYL   + PT  G P++EHL   ++ +L+ RGY K  L  +I G   +P  AP  +RSLQA+  YD  ++   +E  + ++  +   + F AG +V  PA++RG++EG+ + + W+NPYL+RGVP    DL+   G+  S+LG+APA  F+TAVGGN+SA LPNG FD I +A+ +GG   R   R+ RFGVPDTCDV
Sbjct:    2 LQRSYRGYYSRLYKHNFSARKQYLDSIAEKGVALRARLAKHQEALIRADAEAAEQKAQDEFKMVTENLHHLVSTKSIPGVYKSPYL---DEPTAMGRPLEEHLRTGVKAVLQTRGYTKRGLTRNIGGGRVVPIKAPVSKRSLQATSHYDAVTEAERLEKRRTKIGFMDKTKGFEAGHKVPLPAHRRGLNEGSAYQDPWKNPYLTRGVPEPKADLQM--GR--STLGKAPAVHFYTAVGGNKSAALPNGTFDAILDAEHTGGVHLRHKHRSLRFGVPDTCDV 275

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A8K1FM83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM83_PYTOL)

HSP 1 Score: 158 bits (399), Expect = 8.170e-41
Identity = 115/357 (32.21%), Postives = 185/357 (51.82%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQAR--VQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQR----GVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPA---RPFFTAVGGNRSAVLPNGRFDV 1044
            MA F   ++ R + +D  +   ++      +ER AA+ +QR+FRG+RVR        A               R   L    +  +  AVFHY+A  IQ+++RG  SRRT+     R+AY+ E+   G+A+R  L   E   +Q+Q++R      AR  + Q+S+NLHHLVST+A  GV++SP L  T   T  G+P++ H+  + + L+  +    L      T ++  P   P ++ SLQA+ PYD P +    +   H+L+ +  + F A         ++    G++ G ++L+ W+NPY  RG+PR+ EDL      + ++LG+ P    +PF+   GGN+S V  N RFDV
Sbjct:    1 MALFHQCWQQRRSTLDRLQWLLEDAQTNQARERTAAIHIQRLFRGQRVRATITTQRNAEIVLARVYRGHLARRRCRRLREQEQLWQQHAVFHYYAIIIQKVLRGVHSRRTKLDFRVRKAYIREIAAKGDAMRQQL--EENLRRQQQEERQANDEAARHELAQVSQNLHHLVSTRAIAGVYNSPMLASTA--TAFGIPVETHIRENTKTLISTQ----LTTATAPTKLIPYP---PSNKASLQAAAPYDAPLRAVRTQKKYHKLRRISAQDFQAVHNSNQDTLKKLAAPGINAGVEYLDDWKNPYKKRGIPRAKEDLLP----QLTTLGKPPKEKEKPFYLTSGGNKSKVYANDRFDV 342

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A329S815_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S815_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.880e-40
Identity = 117/355 (32.96%), Postives = 181/355 (50.99%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQL---SENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAA----GERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDV 1044
            MA F   ++ R A ++  ++   + +  A  ER AA  +QR+FRG+RVR       +A               R + L      A  QAV  ++A +IQ++ RG  SR  R    KR+AY+ EL   G+ +R  L   EE + ++Q+Q  L   +A  ++L   +++LHHLVST+A  G+F+SP    +   T  GVP++ H+  + R ++  R  +  A  P      R+    P D+ +LQA+  YD   Q    +   H+L+ +G   FA      + V       G++ GT++++ W+NPY  RGVPR+  DL      + S+LGR P  PF+   GGN+S VL N RFDV
Sbjct:    1 MALFYDCWESRGATLERLQQLLDDAEDQAETERKAATHIQRLFRGQRVRAAVTAQTDAELMISRVYRGHLARRRCSGLRADVERAHRQAVLDFYAVAIQKIARGVQSRTLRLDFRKRKAYIGELAAKGDDMRRML---EENLHKQQEQEKLDSEKAAREELVKVTQDLHHLVSTRAVAGIFNSPMQAASA--TSFGVPVESHIRENGRRVVTSRLAK--ARPPS-----RLTPYPPSDKTTLQATSSYDAVQQETRKQTKYHKLRRIGTSDFAVVYNPEQDVARKRNAPGINSGTEYVDEWRNPYKKRGVPRNKRDLLP----QLSTLGRYPETPFYLTYGGNKSKVLANDRFDV 339

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: G4ZSU5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZSU5_PHYSP)

HSP 1 Score: 154 bits (389), Expect = 2.110e-39
Identity = 119/355 (33.52%), Postives = 182/355 (51.27%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQL---SENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAA----GERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDV 1044
            MA F   +K R A ++  ++   + +  A  ER AA  +QR+FRG+RVR       +A               R   L      A  +AV  Y+A  IQ+L RG  SR       KR+AY++EL   G+++R  L   EE ++ +Q++  L   QA  ++L   +++LHHLVSTKA  G+++SP + P    T  GVP++ H+  + R ++  R    LA     + +   P   P ++ +LQA+ PYD   +    +   H+L+ +G   FAA     + V       G++ G ++L+ W+NPY  RGVPR+  DL      + S+LG AP  PF+   GGN+S VL N RFDV
Sbjct:    1 MALFSDCWKSRGATLERLQQLLDDAEDQAETERKAATHIQRLFRGQRVRAAVTRQTDAELMISRVYRGHLGRRRCKRLRAELHRAHRRAVLDYYAVVIQKLARGIQSREHCLDFRKRKAYISELAAKGDSMRRML---EENLRIQQEREQLASEQAAREELVKVTQDLHHLVSTKAVAGIYNSP-MQPASA-TSFGVPVETHIRENARRVVSTR----LATARPPSRLTPYP---PSNKVTLQATAPYDAVQRETRKQTKYHKLRRIGTTDFAAVYNPEQDVARKLNAPGINAGIEYLDDWRNPYKKRGVPRNKRDLLP----QLSTLGHAPETPFYLTYGGNKSKVLANDRFDV 339

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: A0A5D6Y2U2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2U2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.220e-38
Identity = 123/353 (34.84%), Postives = 181/353 (51.27%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQAR-VQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTP----AYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDV 1044
            MA F   +  R   +   ++   + +A A +ER AAV +QR+FRG+ VR         VT             R   L +  ++ +   V HY+A  IQ+ +RG  SRRTR     R+AY+A++   GE +R  LLA     +Q ++QRA+++   R + ++++ LHHLVST+A  GV+++P L P+   T  GVP++ H+  + R LL  R   +   EP  T +   P   P ++ +LQAS  Y    +    +   H+L+ L    F A             Q GV  G  +L+ W NP+  RGVPRS  DL        S+LG+APA+PF    GGN+S VLPN RFDV
Sbjct:    1 MAQFHDCWGSRRTTLARLQQLLADAEANAARERRAAVDIQRLFRGQFVR-------ATVTAQRGHLARR----RCRRLRLQDQQHKRACVLHYYAVIIQKSLRGMHSRRTRLDFRVRKAYVAKIATQGEEMRR-LLAESLCQQQLEEQRAVEEAARRELVEVTQGLHHLVSTRAISGVYNAP-LQPSGPATAFGVPVEAHIRENTRSLLATR---RAEAEP-ATALRPYP---PANKATLQASSVYGADLKEVRAQKKYHKLRRLSASDFQAVHNAARDDSRKLNQLGVHAGVAYLDDWDNPFKKRGVPRSKADLLP----RLSALGKAPAKPFHLTYGGNKSKVLPNDRFDV 329

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BLAST of jgi.p|Trimin1|164883 vs. uniprot
Match: D0NLE6_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLE6_PHYIT)

HSP 1 Score: 149 bits (376), Expect = 1.560e-37
Identity = 118/355 (33.24%), Postives = 177/355 (49.86%), Query Frame = 1

Query:    1 MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQL---SENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAA----GERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDV 1044
            MA F   +  R A +   ++   + +A A  ER AA  +QR+FRG+RVR       +A               R   L      A  ++V  Y+A  IQ+L RG  SR  R    KR+AY+ EL   G+ +R  L   EE + ++Q+Q  L  ++A   +L   +++LHHLVST+A  G+F+SP    +   T  GV ++ H+  + R ++  R  +  A  P      R+    P D+ +LQ+S PYD   Q    +   H+L+ +G   FAA     + V        ++ GT +++ W+NPY  RGVPR+  DL      + S+LGR P  PF+   GGN+S VL N RFDV
Sbjct:    1 MALFHDCWTSRGAALVRLQQLLDDAEAQAETERKAATHIQRLFRGQRVRAAVTAQTDAELLISRVFRGHLARRRCNQLRTDLERAHRRSVLDYYAVVIQKLARGVQSRTLRLDFRKRKAYVLELAAKGDLMRQML---EENLLKQQEQEKLDTKKAARAELVKVTQDLHHLVSTRAVAGIFNSPMQAASV--TSFGVSVESHIRENARRVVTSRLAK--ARPPS-----RLTPYPPSDKTTLQSSGPYDAVQQEKRKQTKYHKLRRIGSSDFAAVYNPEQDVARKRNAPSINSGTDYVDEWRNPYKKRGVPRNKRDLLP----QLSTLGRYPETPFYLTYGGNKSKVLANDRFDV 339

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|164883 vs. uniprot

BLAST of jgi.p|Trimin1|164883 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YV60_9STRA	2.510e-280	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FPJ5_ECTSI	1.720e-96	45.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2G8K6_9STRA	2.590e-75	39.74	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2W8X7_9STRA	1.120e-67	41.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2G0C8_9STRA	1.020e-59	43.42	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A8K1FM83_PYTOL	8.170e-41	32.21	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A329S815_9STRA	2.880e-40	32.96	Uncharacterized protein n=2 Tax=Phytophthora TaxID...	[more]
G4ZSU5_PHYSP	2.110e-39	33.52	Uncharacterized protein n=7 Tax=Phytophthora TaxID...	[more]
A0A5D6Y2U2_9STRA	1.220e-38	34.84	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
D0NLE6_PHYIT	1.560e-37	33.24	Uncharacterized protein n=3 Tax=Phytophthora infes...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:569872..571215 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|164883\|e_gw1.33.161.1
BRITE	ko00000,ko00001,ko04131,ko04147
KEGG Pathway	ko04130,map04130
KEGG ko	ko:K08515
GOs	GO:0003674,GO:0005488,GO:0005515,GO:0008092,GO:0017022,GO:0032027
Preferred name	SPATA17
Description	myosin light chain binding
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CGXK@1\|root,2QS0S@2759\|Eukaryota
Evalue	2.81e-97
Seed ortholog	2880.D7FPJ5
Hectar predicted targeting category	other localisation
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-12_000820.1
TranscriptId	165205
Track	FilteredModels1
ProteinId	164883

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164883	gene_5961	Tribonema minus UTEX_B_3156	gene	Contig_33 569872..571215 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5961_1	exon_5961_1	Tribonema minus UTEX_B_3156	exon	Contig_33 569872..571215 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5961	CDS_5961	Tribonema minus UTEX_B_3156	CDS	Contig_33 569872..571215 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164883	Trimin1\|164883\|e_gw1.33.161.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_33 569872..571215 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_33:569872..571215+
coding sequence from alignment at Contig_33:569872..571215+

spliced messenger RNA

>mRNA_5961 ID=mRNA_5961|Name=jgi.p|Trimin1|164883|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1344bp|location=Sequence derived from alignment at Contig_33:569872..571215+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGATTTCATGGCTATATACAAGGGGAGAGCAGCACTTGTTGATGA
GGCCAGGCGTCGCCAACAAGAGCGCGATGCAGCTGCTCCTCAGGAGCGGA
ACGCGGCAGTCAGCGTGCAGCGAATATTCAGAGGCAAGAGGGTACGGGAC
AGGCATAAGGTGCTGAACGAGGCAGTCACCAAGATAGCTAGGCTCTTCAG
AGGACATCGCGTGCGCGTACGAGCGGCTGCTCTGATGGTCGCTCGACGAG
AAGCAGAGCTACAGGCGGTGTTCCACTACCACGCGCGGAGCATACAGAGA
CTCATCAGAGGCTTTGTGAGTCGGCGCACGCGATACTGTCACGCAAAGCG
CAGGGCGTACCTGGCAGAACTAGTGCAGGTCGGAGAAGCCCTCAGGGCCA
CTCTGCTGGCTCACGAGGAGCAGATGAAGCAGGAGCAGGATCAGAGAGCA
CTGCAGCAGAGGCAGGCGAGGGTGCAGCAGCTGTCGGAAAACCTGCACCA
CCTGGTCAGCACCAAGGCGCAGCCGGGCGTCTTCTCCTCGCCGTACCTCC
ACCCCACGGAGCTCCCCACCATAGACGGCGTGCCCATCGACGAGCACCTC
ACGCGCAGCATCCGGGACCTGCTGCGCAAGCGCGGCTACCAGAAGCTCGC
GCTGGAGCCCGACATCACCGGCGTGATGCGCATGCCGCAGGCGGCGCCCG
GCGACCGCCGCAGCCTCCAGGCCTCGCAGCCCTACGACCTGCCCTCGCAG
CTGGCCGCGGTGGAGGCCGTCCAGCACCGCCTGAAGCTGCTGGGGCCGCG
CCACTTTGCGGCGGGCGAGCGCGTGCGCACCCCCGCGTACCAGCGCGGCG
TCAGCGAGGGGACGCAGTTCCTGGAGCACTGGCAGAACCCGTACCTGTCG
CGCGGGGTCCCGCGCTCCCCGGAGGACCTCAGGAGCCCCCCCGGAAAGGA
GGGAAGCAGCCTTGGGCGCGCCCCCGCGCGCCCCTTCTTCACCGCCGTCG
GCGGCAACAGGAGCGCCGTGCTGCCCAACGGGCGCTTCGACGTCATCGCG
GAGGCGCAGCGCAGCGGCGGCGCGGCGGGGCGCCCCTTCGGGCGCACGCG
GCGCTTCGGCGTGCCCGACACGTGCGACGTCGGCGGCGGCCGGCGCGAGG
CGCTGCGCGAGGCGTACGCGCGCATGACGGCGCCGACGCGGCCAAAGGGG
GTGGGGGGAGGGGGGGGGCTGAGCGTGATTGAGAGCAGCGCGGGGGAGGA
GCTGCTGTGTACACAGGGGGGGGGCGGGGGCGGCGCGGCGCGCGGCGGGA
AGAGTGTCGAACCGAGCGGCCCTGAGGTCCCTGCGTATAGTTGA

protein sequence of jgi.p|Trimin1|164883

>Trimin1|164883|e_gw1.33.161.1 ID=Trimin1|164883|e_gw1.33.161.1|Name=jgi.p|Trimin1|164883|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=448bp
MADFMAIYKGRAALVDEARRRQQERDAAAPQERNAAVSVQRIFRGKRVRD
RHKVLNEAVTKIARLFRGHRVRVRAAALMVARREAELQAVFHYHARSIQR
LIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRA
LQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTELPTIDGVPIDEHL
TRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQ
LAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLS
RGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIA
EAQRSGGAAGRPFGRTRRFGVPDTCDVGGGRREALREAYARMTAPTRPKG
VGGGGGLSVIESSAGEELLCTQGGGGGGAARGGKSVEPSGPEVPAYS*

mRNA from alignment at Contig_33:569872..571215+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5961 ID=mRNA_5961|Name=jgi.p|Trimin1|164883|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1344bp|location=Sequence derived from alignment at Contig_33:569872..571215+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATTTCATGGCTATATACAAGGGGAGAGCAGCACTTGTTGATGA
GGCCAGGCGTCGCCAACAAGAGCGCGATGCAGCTGCTCCTCAGGAGCGGA
ACGCGGCAGTCAGCGTGCAGCGAATATTCAGAGGCAAGAGGGTACGGGAC
AGGCATAAGGTGCTGAACGAGGCAGTCACCAAGATAGCTAGGCTCTTCAG
AGGACATCGCGTGCGCGTACGAGCGGCTGCTCTGATGGTCGCTCGACGAG
AAGCAGAGCTACAGGCGGTGTTCCACTACCACGCGCGGAGCATACAGAGA
CTCATCAGAGGCTTTGTGAGTCGGCGCACGCGATACTGTCACGCAAAGCG
CAGGGCGTACCTGGCAGAACTAGTGCAGGTCGGAGAAGCCCTCAGGGCCA
CTCTGCTGGCTCACGAGGAGCAGATGAAGCAGGAGCAGGATCAGAGAGCA
CTGCAGCAGAGGCAGGCGAGGGTGCAGCAGCTGTCGGAAAACCTGCACCA
CCTGGTCAGCACCAAGGCGCAGCCGGGCGTCTTCTCCTCGCCGTACCTCC
ACCCCACGGAGCTCCCCACCATAGACGGCGTGCCCATCGACGAGCACCTC
ACGCGCAGCATCCGGGACCTGCTGCGCAAGCGCGGCTACCAGAAGCTCGC
GCTGGAGCCCGACATCACCGGCGTGATGCGCATGCCGCAGGCGGCGCCCG
GCGACCGCCGCAGCCTCCAGGCCTCGCAGCCCTACGACCTGCCCTCGCAG
CTGGCCGCGGTGGAGGCCGTCCAGCACCGCCTGAAGCTGCTGGGGCCGCG
CCACTTTGCGGCGGGCGAGCGCGTGCGCACCCCCGCGTACCAGCGCGGCG
TCAGCGAGGGGACGCAGTTCCTGGAGCACTGGCAGAACCCGTACCTGTCG
CGCGGGGTCCCGCGCTCCCCGGAGGACCTCAGGAGCCCCCCCGGAAAGGA
GGGAAGCAGCCTTGGGCGCGCCCCCGCGCGCCCCTTCTTCACCGCCGTCG
GCGGCAACAGGAGCGCCGTGCTGCCCAACGGGCGCTTCGACGTCATCGCG
GAGGCGCAGCGCAGCGGCGGCGCGGCGGGGCGCCCCTTCGGGCGCACGCG
GCGCTTCGGCGTGCCCGACACGTGCGACGTCGGCGGCGGCCGGCGCGAGG
CGCTGCGCGAGGCGTACGCGCGCATGACGGCGCCGACGCGGCCAAAGGGG
GTGGGGGGAGGGGGGGGGCTGAGCGTGATTGAGAGCAGCGCGGGGGAGGA
GCTGCTGTGTACACAGGGGGGGGGCGGGGGCGGCGCGGCGCGCGGCGGGA
AGAGTGTCGAACCGAGCGGCCCTGAGGTCCCTGCGTATAGTTGA

Coding sequence (CDS) from alignment at Contig_33:569872..571215+

>mRNA_5961 ID=mRNA_5961|Name=jgi.p|Trimin1|164883|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1344bp|location=Sequence derived from alignment at Contig_33:569872..571215+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATTTCATGGCTATATACAAGGGGAGAGCAGCACTTGTTGATGA
GGCCAGGCGTCGCCAACAAGAGCGCGATGCAGCTGCTCCTCAGGAGCGGA
ACGCGGCAGTCAGCGTGCAGCGAATATTCAGAGGCAAGAGGGTACGGGAC
AGGCATAAGGTGCTGAACGAGGCAGTCACCAAGATAGCTAGGCTCTTCAG
AGGACATCGCGTGCGCGTACGAGCGGCTGCTCTGATGGTCGCTCGACGAG
AAGCAGAGCTACAGGCGGTGTTCCACTACCACGCGCGGAGCATACAGAGA
CTCATCAGAGGCTTTGTGAGTCGGCGCACGCGATACTGTCACGCAAAGCG
CAGGGCGTACCTGGCAGAACTAGTGCAGGTCGGAGAAGCCCTCAGGGCCA
CTCTGCTGGCTCACGAGGAGCAGATGAAGCAGGAGCAGGATCAGAGAGCA
CTGCAGCAGAGGCAGGCGAGGGTGCAGCAGCTGTCGGAAAACCTGCACCA
CCTGGTCAGCACCAAGGCGCAGCCGGGCGTCTTCTCCTCGCCGTACCTCC
ACCCCACGGAGCTCCCCACCATAGACGGCGTGCCCATCGACGAGCACCTC
ACGCGCAGCATCCGGGACCTGCTGCGCAAGCGCGGCTACCAGAAGCTCGC
GCTGGAGCCCGACATCACCGGCGTGATGCGCATGCCGCAGGCGGCGCCCG
GCGACCGCCGCAGCCTCCAGGCCTCGCAGCCCTACGACCTGCCCTCGCAG
CTGGCCGCGGTGGAGGCCGTCCAGCACCGCCTGAAGCTGCTGGGGCCGCG
CCACTTTGCGGCGGGCGAGCGCGTGCGCACCCCCGCGTACCAGCGCGGCG
TCAGCGAGGGGACGCAGTTCCTGGAGCACTGGCAGAACCCGTACCTGTCG
CGCGGGGTCCCGCGCTCCCCGGAGGACCTCAGGAGCCCCCCCGGAAAGGA
GGGAAGCAGCCTTGGGCGCGCCCCCGCGCGCCCCTTCTTCACCGCCGTCG
GCGGCAACAGGAGCGCCGTGCTGCCCAACGGGCGCTTCGACGTCATCGCG
GAGGCGCAGCGCAGCGGCGGCGCGGCGGGGCGCCCCTTCGGGCGCACGCG
GCGCTTCGGCGTGCCCGACACGTGCGACGTCGGCGGCGGCCGGCGCGAGG
CGCTGCGCGAGGCGTACGCGCGCATGACGGCGCCGACGCGGCCAAAGGGG
GTGGGGGGAGGGGGGGGGCTGAGCGTGATTGAGAGCAGCGCGGGGGAGGA
GCTGCTGTGTACACAGGGGGGGGGCGGGGGCGGCGCGGCGCGCGGCGGGA
AGAGTGTCGAACCGAGCGGCCCTGAGGTCCCTGCGTATAGTTGA