mRNA_5927 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|164785
Unique Name	mRNA_5927
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A835YVD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD2_9STRA)

HSP 1 Score: 635 bits (1639), Expect = 1.070e-229
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1

Query:    1 MTVEGDASTSCIKQPSKLFSAAAPSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAIGGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQRRGXXXXXXXXXXXXXXATLRASSTFSIISGTSQRSVT 1005
            MTVEGDASTSCIKQPSKLFSAAAPSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAIGGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQRRGXXXXXXXXXXXXXXATLRASSTFSIISGTSQRSVT
Sbjct:    1 MTVEGDASTSCIKQPSKLFSAAAPSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAIGGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQRRGXXXXXXXXXXXXXXATLRASSTFSIISGTSQRSVT 335

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A7S1C302_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C302_9STRA)

HSP 1 Score: 150 bits (378), Expect = 8.030e-39
Identity = 92/256 (35.94%), Postives = 138/256 (53.91%), Query Frame = 1

Query:  124 IKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAK--AIGGP-FVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            IK  FS  ++ +   +P  L A   L+ A    ++   S  P   P +P  +   +F E++++PS Y+L  +    E  + +AK  AIGG  + P+    + KHE++   +   F Y    + DP+     +  R R     K+L+G F P G  K   G TR+LLP I++ LHR +  DW D  F V++TEDDMIV RF A  V S   L +YMN LA + G++     L  +++DW+ +PGDGF+Y+M RPPWV
Sbjct:   58 IKLAFSAASWVSTREMPANLAAG--LQGARAGTMEMSRSSAPMAKPPVPQFRKKEVFSEFEYVPSRYSLAAEQRAAERLEDEAKRLAIGGKDWAPSSKRARMKHEDLFEDKEYRFPY----MSDPYTAARDQAMRARWIEDSKILHGPFLPGGPAKSSEGITRQLLPAILKELHRVVDEDWGDYIFSVMSTEDDMIVVRFQADTVDSERGLHAYMNVLA-STGDVVSKNKLTRVVEDWHAQPGDGFLYYMFRPPWV 306

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A1V9Z6I3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6I3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.890e-32
Identity = 93/277 (33.57%), Postives = 147/277 (53.07%), Query Frame = 1

Query:   70 PSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAA-DTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKA--IGGP-FVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAG-PTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAP-ALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            PS  + LP   +  E + IK  FS   + ++  +P RL  ++V +A  + +   + T+ +   AP M T     LF ++++ PS ++L D+LA+ E  + +AK   IGG  FV +    K K+E+   ++   + YP L V   +D       R R    +KVL+GDFKP+G  K     PT++LLPD+++ +H  +  DW D T  V  T+D  I  RF    +     AL +YMN  A +   L   + L  +++DWN +P DG +YF++RPPWV
Sbjct:   16 PSFSSILPEYAN-AEAEHIKSAFSTGNYHSILKMPARLAPNSVNQARQECMDDNRHTATLVKAAPKMVTKN--GLFNQFEYTPSRFSLGDELAKAERLEAEAKRFEIGGKDFVCSSGAKKLKYED--GFEDKNYVYPHLDVY--YDDARDIALRERWLEKKKVLFGDFKPSGTAKPIGDVPTKKLLPDVIKDIHEAIAADWEDATVVVAPTDDGNIAVRFEHESLGGLEHALTAYMNVFANSH-RLMSKYMLQKVVEDWNSKPTDGGLYFVMRPPWV 284

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: R1BRI3_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BRI3_EMIHU)

HSP 1 Score: 130 bits (328), Expect = 1.200e-31
Identity = 95/290 (32.76%), Postives = 147/290 (50.69%), Query Frame = 1

Query:   58 SAAAPSIHTALPL------KTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAI---GGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAG------PTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            +A+AP+ H ALP       +    E   I Q F    F +L  +PNRL   +V        L+        G+ +       + F E++++PS Y++ + + R+E    +++A    GG +  AGS    +HE     +A GF+    +  DPF     +  R++      +L G F+PAGR KG AG      P+  +LP++V+ +HR+L  DW  + F V +TED+ IV R   S + +AP L +YMN+ AR+       + L   ++DWN  PGDG +YF LRPPWV
Sbjct:    9 AASAPAPHYALPSLCAELPEYTNAEADAIAQAFRSGNFCSLKDIPNRLGCGSVARHRFRKVLKSREPVAACGSYSR-----RSAFSEFEYIPSPYSMAESIRRQERLHHESQAERFGGGAWRAAGSACPLRHEAF--GRADGFSV-YQSEPDPFGAAEDQALRQKWLQDAAILAGPFRPAGRNKGRAGESSSELPSGSMLPEMVQQIHRQLQADW-SLPFVVCSTEDEHIVIRVELSALDAAPGLVAYMNAFARS-NHFVNAYRLRRTVEDWNVTPGDGHLYFTLRPPWV 288

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A067C2X6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2X6_SAPPC)

HSP 1 Score: 128 bits (321), Expect = 5.820e-31
Identity = 93/276 (33.70%), Postives = 139/276 (50.36%), Query Frame = 1

Query:   70 PSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKA--IGGP-FVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYA-GPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAP-ALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            P+  + LP   +  E + I+  FS   + +L  +P RL  ++V  A      +   + V   AP     K   LF ++++ PS + L D+L R E  + +AK   IGG  FV + +  K KHE+   ++   F YP + V   +D       R R    +K+LY DF P+G  K     PT++LLPDI++ LH  +  DW D T  V  T+D  I  +F    V     AL +YMN  A     L   F LH +++DWN +PGD  +YF++RPPW+
Sbjct:   17 PNFSSILPEYAN-AEAEHIRSAFSTGNYHSLLKMPARLGPNSVNMARQEAMDENRHTAVALKAPPKIVTK-NGLFNQFEYTPSRFNLSDELHRAERLESEAKRFQIGGKDFVCSSNAKKLKHED--GFEDKNFVYPHMDVY--YDDAHDIAVRERWIEKQKILYHDFVPSGAAKPMGDAPTKKLLPDIIKELHEAIANDWEDCTVVVAPTDDGNIAIQFDLDTVGGLEHALTAYMNVFANTH-RLMAKFQLHKVVEDWNVKPGDNGLYFVVRPPWI 285

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A8K1FHD7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD7_PYTOL)

HSP 1 Score: 121 bits (304), Expect = 1.760e-28
Identity = 90/298 (30.20%), Postives = 149/298 (50.00%), Query Frame = 1

Query:    4 TVEGDASTSCIKQPSKLF-SAAAPSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKA---IGGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGP-TRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            +V GD S    + P  L  +   P+  + LP   +  E  +I+  F+   F++L  LP++L A N + A      +++  +   G      V    LF  +++ PS Y+L D+LA+ E  + +AK     G  FV      + K+E+         TYP L   +P+     E R R+    +K+L+G F P+G R       T+ +LP+I++ +H  L  DW  V F +  T+D+++  RF+ + + S   L +YMN   R+   L   + LH + +DWN +PGDG +YF++RPPW 
Sbjct:    9 SVLGDESYELDEAPGSLMPNYMRPNFSSLLPEYAN-AETDQIRSAFTTNNFTSLHKLPSKL-APNAVTAGR---FEQMDENRLQGVAPAKIVTKNGLFNAFEYTPSRYSLADELAQMERIESEAKRQSISGQDFVSTSDPKRLKYEDPFGDLQQ--TYPHLH--EPYPDLRDEERHRKWLEDKKILHGAFVPSGHRLDVEYTITKLILPEILQQIHSVLATDWPHVEFSIAPTDDELLAVRFSEATLESEAGLIAYMNVFIRSH-RLALKYKLHKVAEDWNAKPGDGGLYFVMRPPWA 296

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A8J5XB30_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XB30_DIALT)

HSP 1 Score: 120 bits (300), Expect = 2.440e-27
Identity = 80/214 (37.38%), Postives = 111/214 (51.87%), Query Frame = 1

Query:  283 ANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAIGG----PFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPT------RRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQR 894
            A  F+E+++MPS Y+L ++LA++E      K         F PA S  +  HE++    AG FT   +   DPF+    +  R++     +VL   FKPAGR +G AG        R+ LP+IV  L R L  DW      V ATED+ IV RF  + +   P L +YMN  A A  EL     L  +++DWN  PGDG++YF  RP WV + R
Sbjct:  111 AKYFMEFEYMPSPYSLAEELAKDERNANNVKVAQAGHALTFRPADSRTRHAHEDV----AGKFTEYII---DPFECAGDQVLRQKWLMDAQVLAAPFKPAGRNRGAAGEASTEMTGRQQLPEIVAALSRVLEEDWEGCPMLVCATEDEHIVVRFGMATLEEEPGLIAYMNVFA-ASHELVSRHKLRKVVEDWNVTPGDGYLYFTFRPSWVHVPR 316

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A7S3AVW4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AVW4_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 2.580e-27
Identity = 89/290 (30.69%), Postives = 139/290 (47.93%), Query Frame = 1

Query:   64 AAPSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAG-APTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKA--IGGP--FVPAGSTYKCKHENMLAWQAGGFTYPTLAVG---DPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAG------PTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQ 891
            A P+    LP  +++ E   I Q F    + +L+ LPNR+    V  +      QK+  +     A   P    A  F E++H+PS Y+L +++AR E    +AK   +G    F  + +  K KHE+          +  L  G   DP++    +  R +     + L G F+PAGR KG  G      P+R  +P +V  +   +  DW +  F V +T+D+ +V RF  S + S P L +YMN  AR+   +     L  +++DWN  PGDG +YF  RPPWV ++
Sbjct:    9 ALPNFSVVLPTFSNH-ETDVITQAFRIGNYVSLSDLPNRVRPGQVSRSR----FQKILDNRQISEAEPQPYKAKAKYFSEFEHVPSPYSLVEEMARAERLQSEAKTKEVGHTMAFRMSDTAVKLKHEDAF--------FNELDYGANTDPYERADDQALRFKWLQDAQFLAGPFRPAGRVKGQTGQAAIEIPSRATMPQMVDKVREAIEEDWSEYAFLVCSTDDEHLVVRFELSTLDSEPGLVAYMNMFARS-NRVVNSLMLRKVVEDWNVTPGDGHLYFTFRPPWVAVK 284

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: K3X6I1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6I1_GLOUD)

HSP 1 Score: 117 bits (294), Expect = 3.060e-27
Identity = 80/271 (29.52%), Postives = 136/271 (50.18%), Query Frame = 1

Query:   70 PSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAI---GGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPTRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRP 873
            P+  + LP   +  E  +I+  F    ++++  +P +L+A+ V +A      +++  +  A       V    LF ++++ PS ++L D+LA+ E    +AK     G  FV      K K E+  A+    F YP L   +P+     E R ++    +K+LYG F P+G R      TR++ P+I++ LH     DW+ V F +  T+D+ +  RF A+ +     L +YMN   R+   +   + L  + +DWN +PGDG +YFMLRP
Sbjct:   25 PNFSSLLPEYAN-AEADQIRSAFVTNNYTSIQKIPAKLLANAVNQAR----FEQMDENRLAQPRVGKIVTKNGLFNQFEYTPSRFSLADELAQMERLQSEAKRTEISGRDFVSCPDGTKTKFED--AFGDKNFRYPHLY--EPYPDTKDEERHKKWLEDKKILYGAFVPSGMRLPVDAVTRKMTPEIIKELHEVFAADWQGVDFSIAMTDDENLAVRFDAATLECESGLIAYMNVFVRSH-RVTSKYNLQKVAEDWNSKPGDGGLYFMLRP 285

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A1V9ZC18_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC18_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.040e-27
Identity = 87/277 (31.41%), Postives = 136/277 (49.10%), Query Frame = 1

Query:   70 PSIHTALPLKTDYVERQRIKQTFSPTAFSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLEYDHMPSSYTLQDDLAREEMWDKQAKAI---GGPFVPAGSTYKCKHENMLAWQAGGFTYPTLAV--GDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGP-TRRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALRSYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWV 882
            P+  + LP   +  E + IK  FS   + ++  +P++L  + V +A   +  +   S   A  P     K   LF ++D+ PS Y+  D+L R E  + +AK +   G  F+ +    K K+E+   ++   F YP + V   D  D       R R    +K L+ DF P+G  K      TR+LLPDIV+ L   +  DW D    V+ T+D  I  RF   D+    AL +YMN  + +   L   + L  +++DWN +PGD  +YF+LRPPW+
Sbjct:   19 PNFSSILPEYAN-AEAEHIKSAFSTGNYHSILKMPSKLAPNAVNQARQDMMDENRYSGAVAKPPPKIVTK-NGLFNQFDYTPSRYSFGDELLRAERLENEAKRLEIGGKDFICSSGAKKLKYED--GFEDKDFVYPHMDVYYNDAHD----IAVRERWIEQKKKLFHDFVPSGATKSVGDILTRKLLPDIVKELQEAISSDWEDCVVAVIPTDDGNIAIRFQL-DLGLESALAAYMNVFSNSH-RLMTKYMLQKVVEDWNSKPGDNCLYFVLRPPWI 285

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 700 bits (1807), Expect = 8.370e-254
Identity = 350/357 (98.04%), Postives = 353/357 (98.88%), Query Frame = 1

Query:    1 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARQEPAQPPIKKRDMHEQTAAKGFA 1071
            DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAV+IDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP+IKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLA VVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNNYRARQEPA PPIKKRDMHEQ AAKGFA
Sbjct:    9 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFA 365

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 653 bits (1685), Expect = 5.080e-226
Identity = 333/357 (93.28%), Postives = 336/357 (94.12%), Query Frame = 1

Query:    1 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARQEPAQPPIKKRDMHEQTAAKGFA 1071
            DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAV+IDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMP+IKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREG DPALILCSSAFSGYNN RARQEPA PPIKKRDMHEQ AAKGFA
Sbjct:  614 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFA 961

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BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.250e-55
Identity = 125/335 (37.31%), Postives = 178/335 (53.13%), Query Frame = 1

Query:    1 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEPAIMQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALIL-----CSSAFSGYN 987
            D+ F  LLD +KD+ S  +GVV+L TATLRPRVR D L  A+   ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A N KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A ++RI   P D +       +    D  +  H + + K++ NL   AF +  V  AK+WYE GLG  P CC         +N  +  WI + CE+G  EG+  +  +     C+S   G N
Sbjct:   13 DKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EGLMASTKMAWNDFCASRPEGNN 341

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 113 bits (283), Expect = 1.450e-23
Identity = 84/300 (28.00%), Postives = 143/300 (47.67%), Query Frame = 1

Query:   22 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDEC 918
            LD  + + + +NG ++L+  TLR   R D+LT   +I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + NGK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF  PG+ +   D           KL + +P    +A  V+    W   GL   P   K A   +  E D L +W+ D C
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMP--GIMAWAVRGCLDWQREGL-RAPEAVKAATANYQQEQDVLAAWLADCC 723

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 112 bits (281), Expect = 2.020e-23
Identity = 98/354 (27.68%), Postives = 154/354 (43.50%), Query Frame = 1

Query:   22 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVE--AFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRARQEPAQPPIKKRDMHEQTAAKGF 1068
            LD    + +  NG V+L T  LRP  R D+LT  V+I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + NGK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +            KN  +   L  E    LA  V     W   GLG+  A  + A   +  E D L +WI + C +G R     A +  S +       R  ++  + P  +R    +   +GF
Sbjct:  219 LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPR------------KNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYASYS-------RWCEQSGERPDSQRKFGMRLTERGF 539

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A1L9GPG1_9BURK (SF3 helicase domain-containing protein n=1 Tax=Polynucleobacter sp. MWH-Adler-W8 TaxID=1819727 RepID=A0A1L9GPG1_9BURK)

HSP 1 Score: 112 bits (281), Expect = 2.590e-23
Identity = 89/305 (29.18%), Postives = 148/305 (48.52%), Query Frame = 1

Query:   19 LLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEA--FLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECEL 924
            LL+ +  +   +NGVV+L T  L       ++T+  + +Y  D+ + P+ ++ L ++           AL++ + R+LGY+ TG V EEI+V   G  A NGK ++ +++Q V G        S L + +     +  S +  L G R + L+E+ +G  LD Q++K ++G   IS R L+    ++ P+   W  TN  PV+K +   I +R+ +IP   KF     A+   D N          L E L  EA   LA ++Q A +WY+GGL   P   K     +  E+D L  ++ +  E 
Sbjct:  462 LLNHDAYLLGVKNGVVDLKTGMLIQPNPTMLMTKQCNANYLTDT-QCPQWLKFLNEVFQG------NQALVDSIQRLLGYTFTGSVTEEIMVICYGFGA-NGKSVMSNVIQHVAGSYGKTGSPSLLKS-RRDDDSSPRSDIAGLAGYRYISLNEMQSGDRLDEQVVKLLAGREAISARALYKDHMTYKPSGKAWLKTNHKPVVKEDDDGIWRRLVVIPFGRKF-----AEVERDPN----------LEEKLTQEADGILAWIIQGAVKWYQGGLSICPTI-KQESTEYRTESDLLGHFLEERVEF 741

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI)

HSP 1 Score: 112 bits (281), Expect = 2.730e-23
Identity = 99/349 (28.37%), Postives = 155/349 (44.41%), Query Frame = 1

Query:    1 DEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIK-AEPAIMQRIEIIPCDAKFRTPG--DAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG--------LGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNYRAR 1002
            D +  KL+D + D   C NGV++L T  L       + TR+  + Y   S         + D+        N    + R L++ LGY++TGH  EEI     G  + NGK  ++  LQ+  G   Y  P S     KA    + GAASSH++AL+GAR+   DE      +++  IK ++GG  ++ RELF    SF PT      TN  P I  A+  +++R+ ++P    ++     D   P+     TH    T L  +   E  L  VV+ +  WY           L   PA    A D +  E D ++ ++ + C++GP      A +L        ++ +AR
Sbjct:  522 DPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLPFRNSYKVAEEVDPNDPHSKPQSTHL--KTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A4P6JVW9_9CHLR (SF3 helicase domain-containing protein n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JVW9_9CHLR)

HSP 1 Score: 112 bits (281), Expect = 3.060e-23
Identity = 92/320 (28.75%), Postives = 145/320 (45.31%), Query Frame = 1

Query:   40 IFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV-SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGVDPALILCSSAFSGYNNY 993
            + +  +GV++L T  LRP   +D +       +       P   Q L +I    P+R +  A L+RL    GYSITG   E +   L G   RNGK  + ++L++VLG           T+     S GA + H+  L+G R++  +E   G  L+   IK+++GG++IS R+L G Q SF PT +    TN  P   A + A  +R  +I  D K R     K  Y+    +  +   K   +      LA +V+   RW + GL   P+   L  + +  E D L ++I D C + P      A +  S  ++ Y  +
Sbjct:  570 LLATPSGVLDLRTGQLRPGRPEDFIRTVCPTKWTGLETPCPRFEQFLQEIFEDKPDRTSVIAFLQRLF---GYSITGLTCEAVFPILFGEEGRNGKDTLLNVLREVLGPHAGAVSHDVFTSSDRFRSGGAPTPHLCDLQGKRLIWGNETRQGECLNVAQIKWLTGGSEISARQLHGEQFSFQPTHLMLLMTNYKPQADARDKAFWERACLI--DFKMRFVDRPKETYERKKDSTLLGRLKAERS----GILAWLVRGCLRWQQVGLNT-PSSVLLWTERYREEEDNLLAFIGDCCIVRP-----DAEVRASELYNAYKEW 874

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 110 bits (274), Expect = 2.030e-22
Identity = 96/301 (31.89%), Postives = 141/301 (46.84%), Query Frame = 1

Query:   22 LDVNKDIFSCQNGVVELATATLRPRVRKDML-TRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIKAEP-AIMQRIEIIPCDAKFRTPG-----DAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGG---LGEKPACCKLACDAFAAENDTL 894
            LD N  +    NGVV+L T  L P  R DML TR  + DY+  +   P  +Q L ++           A +  + R LGY++TG   EEIIVF +G  A NGK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  P+IK +   I +RI ++P   KF         +AK   + N    ++     +        L+  + A +R Y      LGE  A C +A  A    +  L
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKHLEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLADCTIADPAGRVHDQEL 740

[Close]

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Match: A0A2D5XZC9_9ARCH (SF3 helicase domain-containing protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D5XZC9_9ARCH)

HSP 1 Score: 109 bits (273), Expect = 2.750e-22
Identity = 91/296 (30.74%), Postives = 146/296 (49.32%), Query Frame = 1

Query:   22 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVDIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPVIK-AEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWI 906
            LD +  + + +NG ++L T TLR   R D LT  +DIDY+ D+   P   Q L +I         +P ++E L R+ GY+ TG   E+ ++  +G+ A NGK    + +  VLG +    P S   A +  + G++++ + +LRG R+  + E  A   L   ++K  +GG  ++ R L+ +Q SF P  +    TN  P IK A+  I +RI +      F    D + P+          + KLR+  P    L  +V  A++WYEGGLG+ P   K A   +   +D L  +I
Sbjct:  452 LDRHPHLLNVRNGTIDLRTGTLRDHDRGDWLTHRLDIDYDPDA-EAPRWDQFLPEIFPT------QPEMVEWLQRVCGYAATGETVEQCLIVCVGKGA-NGKSAFWNAIGHVLGPLCGVVPFS---AFEKRAPGSSTADLASLRGKRLCLVQEGEANTTLAESVLKRATGGDLVAARNLYKSQMSFQPEFLIVMATNSAPRIKGADEGIWRRIRLSNWTRFFTE--DERDPW---------LSAKLRDESP--GILRWIVDGARQWYEGGLGDPPVI-KQASRNYRHTSDELAGFI 722

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|164785 vs. uniprot
BLAST of jgi.p|Trimin1|164785 vs. uniprot

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A835YVD2_9STRA	1.070e-229	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1C302_9STRA	8.030e-39	35.94	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A1V9Z6I3_9STRA	1.890e-32	33.57	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
R1BRI3_EMIHU	1.200e-31	32.76	Uncharacterized protein n=3 Tax=Emiliania huxleyi ...	[more]
A0A067C2X6_SAPPC	5.820e-31	33.70	Uncharacterized protein n=3 Tax=Saprolegnia TaxID=...	[more]
A0A8K1FHD7_PYTOL	1.760e-28	30.20	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A8J5XB30_DIALT	2.440e-27	37.38	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
A0A7S3AVW4_9EUKA	2.580e-27	30.69	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
K3X6I1_GLOUD	3.060e-27	29.52	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A1V9ZC18_9STRA	6.040e-27	31.41	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]

Pages

BLAST of jgi.p|Trimin1|164785 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z1H9_9STRA	8.370e-254	98.04	SF3 helicase domain-containing protein (Fragment) ...	[more]
A0A835YS19_9STRA	5.080e-226	93.28	D5_N domain-containing protein n=5 Tax=Tribonema m...	[more]
A0A835Z1L1_9STRA	2.250e-55	37.31	D5_N domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A3C1SNC0_9GAMM	1.450e-23	28.00	SF3 helicase domain-containing protein n=1 Tax=Can...	[more]
A0A3D2VPM9_9GAMM	2.020e-23	27.68	SF3 helicase domain-containing protein n=1 Tax=Can...	[more]
A0A1L9GPG1_9BURK	2.590e-23	29.18	SF3 helicase domain-containing protein n=1 Tax=Pol...	[more]
A0A1Y1IMX7_KLENI	2.730e-23	28.37	SF3 helicase domain-containing protein n=1 Tax=Kle...	[more]
A0A4P6JVW9_9CHLR	3.060e-23	28.75	SF3 helicase domain-containing protein n=1 Tax=Kte...	[more]
UPI000AB7246B	2.030e-22	31.89	Uncharacterized protein n=2 Tax=Croceicoccus mobil...	[more]
A0A2D5XZC9_9ARCH	2.750e-22	30.74	SF3 helicase domain-containing protein n=1 Tax=Can...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_33	contig	Contig_33:280243..281337 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|164785\|e_gw1.33.113.1
Description	function. Source PGD
COG category	S
Max annot lvl	121069\|Pythiales
EggNOG OGs	28N5M@1\|root,2QUQS@2759\|Eukaryota,1MG0H@121069\|Pythiales
Evalue	4.14e-36
Seed ortholog	42099.EPrPV00000017063
Hectar predicted targeting category	other localisation
TranscriptId	165107
Track	FilteredModels1
ProteinId	164785

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164785	gene_5927	Tribonema minus UTEX_B_3156	gene	Contig_33 280243..281337 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_5927_1	exon_5927_1	Tribonema minus UTEX_B_3156	exon	Contig_33 280243..280487 +
exon_5927_2	exon_5927_2	Tribonema minus UTEX_B_3156	exon	Contig_33 280575..281337 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_5927	CDS_5927	Tribonema minus UTEX_B_3156	CDS	Contig_33 280243..280487 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|164785	Trimin1\|164785\|e_gw1.33.113.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_33 280243..281337 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_33:280243..281337+
coding sequence from alignment at Contig_33:280243..281337+

spliced messenger RNA

>mRNA_5927 ID=mRNA_5927|Name=jgi.p|Trimin1|164785|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_33:280243..281337+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGTAGAAGGCGATGCCTCTACATCGTGCATCAAGCAGCCTTCAAA
GCTGTTCTCGGCAGCTGCTCCCTCAATTCACACCGCCCTCCCTCTCAAGA
CCGACTACGTGGAAAGACAAAGGATCAAGCAGACCTTCTCTCCTACGGCC
TTCTCAACGCTGGCATCGCTTCCGAACCGACTAGTGGCATCTAATGTGCT
AGAAGCAGCCGACACCATCGCGCTGCAAAAGCTCACCAGTGATGTGCCGG
CTGGTGCGCCGACAATGCCAACAGTCAAGCCAGCAAATCTATTCCTGGAG
TACGACCACATGCCCAGCAGCTACACTCTCCAGGATGACTTGGCCCGGGA
GGAAATGTGGGACAAGCAGGCCAAAGCAATTGGAGGCCCCTTCGTGCCCG
CTGGCAGCACCTACAAATGCAAGCACGAGAACATGCTGGCGTGGCAGGCA
GGCGGCTTCACCTACCCCACCCTGGCAGTCGGCGACCCCTTCGATCCGCC
GCCGCAGGAGTGCCGCCGCCGCCGCGAACGCGCCGCGGAGAAAGTTCTCT
ACGGCGACTTCAAGCCTGCGGGGCGGCGCAAGGGCTACGCGGGACCCACG
CGGCGCCTGCTCCCCGACATCGTCCGCACGCTGCACCGCCGCCTGCTGCG
CGACTGGCGTGACGTCACTTTCGGCGTTCTAGCCACGGAGGACGATATGA
TCGTCGCGCGCTTCGCCGCGTCTGACGTGCGCAGCGCGCCGGCGCTGCGC
TCCTACATGAATAGCCTCGCGCGCGCACCCGGCGAGCTCGGCCAGGACTT
TGGCCTTCACGTGATGCTCGACGACTGGAACCGCAGGCCTGGGGATGGCT
TCATCTATTTCATGCTGCGGCCGCCGTGGGTGCCGCTGCAGCGGCGCGGG
GGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGCAGACGATGATGCGACCCT
CAGGGCCAGCAGCACGTTCAGCATCATCAGCGGCACGTCACAGCGCTCAG
TGACATAA

protein sequence of jgi.p|Trimin1|164785

>Trimin1|164785|e_gw1.33.113.1 ID=Trimin1|164785|e_gw1.33.113.1|Name=jgi.p|Trimin1|164785|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MTVEGDASTSCIKQPSKLFSAAAPSIHTALPLKTDYVERQRIKQTFSPTA
FSTLASLPNRLVASNVLEAADTIALQKLTSDVPAGAPTMPTVKPANLFLE
YDHMPSSYTLQDDLAREEMWDKQAKAIGGPFVPAGSTYKCKHENMLAWQA
GGFTYPTLAVGDPFDPPPQECRRRRERAAEKVLYGDFKPAGRRKGYAGPT
RRLLPDIVRTLHRRLLRDWRDVTFGVLATEDDMIVARFAASDVRSAPALR
SYMNSLARAPGELGQDFGLHVMLDDWNRRPGDGFIYFMLRPPWVPLQRRG
GGGGGGGGGSADDDATLRASSTFSIISGTSQRSVT*

mRNA from alignment at Contig_33:280243..281337+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5927 ID=mRNA_5927|Name=jgi.p|Trimin1|164785|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1095bp|location=Sequence derived from alignment at Contig_33:280243..281337+ (Tribonema minus UTEX_B_3156 )
ATGACGGTAGAAGGCGATGCCTCTACATCGTGCATCAAGCAGCCTTCAAA
GCTGTTCTCGGCAGCTGCTCCCTCAATTCACACCGCCCTCCCTCTCAAGA
CCGACTACGTGGAAAGACAAAGGATCAAGCAGACCTTCTCTCCTACGGCC
TTCTCAACGCTGGCATCGCTTCCGAACCGACTAGTGGCATCTAATGTGCT
AGAAGCAGCCGACACCATCGCGCTGCAAAAGCTCACCAGTGATGTGTCAA
GAGGAACTAAGTATCAGAATCGTGCCGCAGCCACCACAGCTGTTGCTGCG
ATTCCTGCCACCTGCTATCAACCGCCGTTCAGGCCGGCTGGTGCGCCGAC
AATGCCAACAGTCAAGCCAGCAAATCTATTCCTGGAGTACGACCACATGC
CCAGCAGCTACACTCTCCAGGATGACTTGGCCCGGGAGGAAATGTGGGAC
AAGCAGGCCAAAGCAATTGGAGGCCCCTTCGTGCCCGCTGGCAGCACCTA
CAAATGCAAGCACGAGAACATGCTGGCGTGGCAGGCAGGCGGCTTCACCT
ACCCCACCCTGGCAGTCGGCGACCCCTTCGATCCGCCGCCGCAGGAGTGC
CGCCGCCGCCGCGAACGCGCCGCGGAGAAAGTTCTCTACGGCGACTTCAA
GCCTGCGGGGCGGCGCAAGGGCTACGCGGGACCCACGCGGCGCCTGCTCC
CCGACATCGTCCGCACGCTGCACCGCCGCCTGCTGCGCGACTGGCGTGAC
GTCACTTTCGGCGTTCTAGCCACGGAGGACGATATGATCGTCGCGCGCTT
CGCCGCGTCTGACGTGCGCAGCGCGCCGGCGCTGCGCTCCTACATGAATA
GCCTCGCGCGCGCACCCGGCGAGCTCGGCCAGGACTTTGGCCTTCACGTG
ATGCTCGACGACTGGAACCGCAGGCCTGGGGATGGCTTCATCTATTTCAT
GCTGCGGCCGCCGTGGGTGCCGCTGCAGCGGCGCGGGGGCGGCGGCGGCG
GCGGCGGCGGCGGCAGCGCAGACGATGATGCGACCCTCAGGGCCAGCAGC
ACGTTCAGCATCATCAGCGGCACGTCACAGCGCTCAGTGACATAA

Coding sequence (CDS) from alignment at Contig_33:280243..281337+

>mRNA_5927 ID=mRNA_5927|Name=jgi.p|Trimin1|164785|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_33:280243..281337+ (Tribonema minus UTEX_B_3156 )
ATGACGGTAGAAGGCGATGCCTCTACATCGTGCATCAAGCAGCCTTCAAA
GCTGTTCTCGGCAGCTGCTCCCTCAATTCACACCGCCCTCCCTCTCAAGA
CCGACTACGTGGAAAGACAAAGGATCAAGCAGACCTTCTCTCCTACGGCC
TTCTCAACGCTGGCATCGCTTCCGAACCGACTAGTGGCATCTAATGTGCT
AGAAGCAGCCGACACCATCGCGCTGCAAAAGCTCACCAGTGATGTGCCGG
CTGGTGCGCCGACAATGCCAACAGTCAAGCCAGCAAATCTATTCCTGGAG
TACGACCACATGCCCAGCAGCTACACTCTCCAGGATGACTTGGCCCGGGA
GGAAATGTGGGACAAGCAGGCCAAAGCAATTGGAGGCCCCTTCGTGCCCG
CTGGCAGCACCTACAAATGCAAGCACGAGAACATGCTGGCGTGGCAGGCA
GGCGGCTTCACCTACCCCACCCTGGCAGTCGGCGACCCCTTCGATCCGCC
GCCGCAGGAGTGCCGCCGCCGCCGCGAACGCGCCGCGGAGAAAGTTCTCT
ACGGCGACTTCAAGCCTGCGGGGCGGCGCAAGGGCTACGCGGGACCCACG
CGGCGCCTGCTCCCCGACATCGTCCGCACGCTGCACCGCCGCCTGCTGCG
CGACTGGCGTGACGTCACTTTCGGCGTTCTAGCCACGGAGGACGATATGA
TCGTCGCGCGCTTCGCCGCGTCTGACGTGCGCAGCGCGCCGGCGCTGCGC
TCCTACATGAATAGCCTCGCGCGCGCACCCGGCGAGCTCGGCCAGGACTT
TGGCCTTCACGTGATGCTCGACGACTGGAACCGCAGGCCTGGGGATGGCT
TCATCTATTTCATGCTGCGGCCGCCGTGGGTGCCGCTGCAGCGGCGCGGG
GGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGCAGACGATGATGCGACCCT
CAGGGCCAGCAGCACGTTCAGCATCATCAGCGGCACGTCACAGCGCTCAG
TGACATAA