mRNA_5955 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|164760
Unique NamemRNA_5955
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A836CDZ5_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 2.120e-189
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1
Query:    1 MSEAVKPAKPKKLPXXXXXHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQSPQPQQPLRTAEAERAIARAVEGAADSDAXXXXXXXXXXXXXXXXAKSAADPSKR 888
            MSEAVKPAKPKKLPXXXXXHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQSPQPQQPLRTAEAERAIARAVEGAADSDAXXXXXXXXXXXXXXXXAKSAADPSKR
Sbjct:    1 MSEAVKPAKPKKLPXXXXXHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQSPQPQQPLRTAEAERAIARAVEGAADSDAXXXXXXXXXXXXXXXXAKSAADPSKR 296          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: D8LE41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.230e-101
Identity = 152/221 (68.78%), Postives = 173/221 (78.28%), Query Frame = 1
Query:   61 EDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQ 723
            EDGLTRYP+  SPQGVLRGLD  GT VFA SG VTAGQ GMDLLGC IVGTITA GGGTVRD+LLGNTPVFWM ETEYL++CLA  VG FF +S LAE+G   D  LLNW DA+GVGAFC IGAQ  VR+ LS  +CVACGM T+TFGGVIRDVLC RPPRIL SH EIYASTA++G+  Y+A + A   P++RI  GF +A ALR+ A+   +RLPTW Q
Sbjct:   69 EDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAERGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLPTWTQ 289          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A6H5JGY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY7_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 1.970e-99
Identity = 150/221 (67.87%), Postives = 172/221 (77.83%), Query Frame = 1
Query:   61 EDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQ 723
            EDGLTRYP+  SPQGVLRGLD  GT VFA SG VTAG  GMDLLGC IVGTITA GGGTVRD+LLGNTPVFWM ETEYL++CLA +VG FF +S LAE+G   D  LLNW DA+GVGAFC IGAQ  VR+ LS  +CVACGM T+TFGGVIRDVLC RPPRIL SH EIYASTA++G+  Y+A + A   P++RI  GF +A ALR+ A+   +RLP W Q
Sbjct:  151 EDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGHVGMDLLGCIIVGTITATGGGTVRDMLLGNTPVFWMHETEYLWMCLATSVGVFFLWSYLAERGVRNDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLPIWTQ 371          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A6T5MA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MA33_HETAK)

HSP 1 Score: 261 bits (668), Expect = 6.470e-83
Identity = 138/221 (62.44%), Postives = 159/221 (71.95%), Query Frame = 1
Query:   58 HEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTD-SELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTW 717
            H DG+ R+PS S+  G+LRGLD FGTVVFA  G VTAG AGMDLLGCTIVGT+TAVGGGTVRDLLLGN PVFWM ETEY+ + LA A   FF +  L E     + S++L W DA GVGAF VIGAQN +R  L  A+ V CGM TATFGG+IRDVLCQ+PPRILHS +E+YA+TAL+GA  Y A R     P  +I  GF AA A R AAW   +RLP W
Sbjct:  102 HTDGMPRFPSTSAG-GLLRGLDYFGTVVFALGGSVTAGLAGMDLLGCTIVGTVTAVGGGTVRDLLLGNFPVFWMLETEYVLLSLACAWAGFFGWDYLHEHWHLEENSDILRWWDACGVGAFSVIGAQNGLRAGLHPAVAVVCGMITATFGGMIRDVLCQKPPRILHSQSEVYATTALIGAAAYTAARSL--PPAAKIGLGFSAAVASRYAAWTYDIRLPNW 319          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A0G4I443_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I443_9ALVE)

HSP 1 Score: 233 bits (594), Expect = 3.290e-72
Identity = 122/227 (53.74%), Postives = 150/227 (66.08%), Query Frame = 1
Query:   37 LPXXXXXHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRAR--ATPMLRIAGGFGAAFALRIAAWKLQLRLP 711
            LP     H DG+TRYPSLSS  GVLRG D  GT+ F+ SG + A  AG+D LGCT+VGT TAVGGGT+RDLL+GN PVFWM ETEY+++ L  +   FF +      G   D  ++ W DALGVGAF VIG QN +R  LS+  C+ CG+ TATFGG +RDV+C+RP RILHSHAEIY +TAL  AGTY+ +R     +   LRI  G  A    R  A K  ++LP
Sbjct:   45 LPNPPSVHPDGMTRYPSLSSMHGVLRGCDYLGTISFSVSGSLIAATAGLDALGCTLVGTTTAVGGGTIRDLLIGNRPVFWMDETEYVWMALITSAAAFFLFDHQTFVG--EDGPIMFWTDALGVGAFAVIGCQNGLRLGLSSLPCMLCGLMTATFGGAVRDVVCRRPVRILHSHAEIYGTTALFSAGTYLLVRALTLGSGSGLRILCGVLAGIGARYLAVKHDVKLP 269          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A7S0IDQ1_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDQ1_MICPS)

HSP 1 Score: 236 bits (602), Expect = 4.440e-72
Identity = 130/232 (56.03%), Postives = 152/232 (65.52%), Query Frame = 1
Query:   37 LPXXXXXHEDGLTRYP--SLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGN-TPVFWMTETEYLYICLAAAVGTFFTYSALAEQ-GFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWA 720
            +P     H D + R+P    ++  G+LRG D FGT VFA +G + A   GMD+LG TIVGTITAVGGGTVRDLLLG     FWM E EYL+IC+   V TF  +  L    G     E ++WADA+GVGAFCVIGA N +R  +  A  VACGMFTATFGGVIRDVL  RP RILHS+ +IYA+TAL GA TYM +R A A    RI  G G A ALR  AW   LRLPT+A
Sbjct:  109 VPATPAPHPDSMPRFPWSDGATVPGLLRGADWFGTAVFAMTGTLAAATRGMDILGSTIVGTITAVGGGTVRDLLLGRGRRAFWMEEIEYLWICVGTGVATFLAWPHLERACGVKDTDEWVDWADAIGVGAFCVIGAMNGIRAGVPCAAAVACGMFTATFGGVIRDVLMSRPVRILHSYTDIYATTALTGATTYMLVRAAGAPVSARILAGAGTAIALRKLAWSNDLRLPTYA 340          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A7S1TDV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD)

HSP 1 Score: 230 bits (587), Expect = 5.080e-72
Identity = 124/219 (56.62%), Postives = 149/219 (68.04%), Query Frame = 1
Query:   64 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQG--FTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPT 714
            DG+ R+P+ S+  G+LRGLD  GT+VFA+SG V A   GMDLLGC++VG ITAVGGGTVRDL LGN PVFWM ETEYL +CL  +  T   +  L       +T  ++  ++DA G+ AFCVIGAQN +R  +   I V CGM TATFGGVIRDVLCQRP RILHSHAE+YAS A VGA +Y+   R       RI  G GAA   RIAA+   +RLPT
Sbjct:    6 DGMPRFPNWSAG-GLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKVELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPT 223          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA)

HSP 1 Score: 231 bits (589), Expect = 9.410e-72
Identity = 114/223 (51.12%), Postives = 146/223 (65.47%), Query Frame = 1
Query:   64 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYS------ALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPT 714
            + +TRYPSL S  G+LR LD  GTV FA  G + AG+AGMDLLGC  +G ITA+GGGT RDLLLG TPVFW+ E EYL +C+  ++ TF+ +        L+  G + D  L  W D +G+GAF V+G Q+ +RRRL     V     T +FGGV RDV+ + P R++HSHAE+YA+TA  G+  Y+  R A A P+LR+A GFG   A R AAW L LRLPT
Sbjct:   44 ESMTRYPSLRSAGGLLRSLDYLGTVAFATGGAICAGRAGMDLLGCIEIGVITAMGGGTTRDLLLGQTPVFWLQEVEYLAMCIVTSIATFYAWPHLRHMPILSASGSSDDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLPT 266          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A7S1XFC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD)

HSP 1 Score: 230 bits (587), Expect = 8.520e-71
Identity = 124/219 (56.62%), Postives = 149/219 (68.04%), Query Frame = 1
Query:   64 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAEQG--FTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPT 714
            DG+ R+P+ S+  G+LRGLD  GT+VFA+SG V A   GMDLLGC++VG ITAVGGGTVRDL LGN PVFWM ETEYL +CL  +  T   +  L       +T  ++  ++DA G+ AFCVIGAQN +R  +   I V CGM TATFGGVIRDVLCQRP RILHSHAE+YAS A VGA +Y+   R       RI  G GAA   RIAA+   +RLPT
Sbjct:   96 DGMPRFPNWSAG-GLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKVELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLPT 313          
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Match: A0A830HNH6_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HNH6_9CHLO)

HSP 1 Score: 221 bits (562), Expect = 4.960e-66
Identity = 123/221 (55.66%), Postives = 146/221 (66.06%), Query Frame = 1
Query:   70 LTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLG-NTPVFWMTETEYLYICLAAAVGTFFTYSALAEQGFTTDSE-LLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQS 726
            L R+P  ++  G+LR LD  GTV FA SG +TA  AGMD LGC IVGTITAVGGGTVRD LLG   P FWM E EYLY+C+A    TFF +  +++      +E ++   D LG+GAFCVIGA N VR  +       CGM TATFGGVIRD LC+RP RILHSH E+YA+ ALVGA +Y+A R A     L I  G GAAFALR A+    LRLPT + S
Sbjct:  167 LPRFPEPNAG-GLLRFLDYVGTVAFASSGALTASAAGMDALGCGIVGTITAVGGGTVRDFLLGVRGPCFWMAEAEYLYMCIATTAATFFLWPNISQSQMNPTAEAVIETGDFLGLGAFCVIGAHNGVRAGVPLVAAAICGMATATFGGVIRDTLCKRPVRILHSHQELYATCALVGATSYLASRGAGLPTALNIFVGMGAAFALRYASMNYGLRLPTLSSS 386          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164760 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDZ5_9STRA2.120e-189100.00UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
D8LE41_ECTSI1.230e-10168.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY7_9PHAE1.970e-9967.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6T5MA33_HETAK6.470e-8362.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4I443_9ALVE3.290e-7253.74Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0IDQ1_MICPS4.440e-7256.03Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
A0A7S1TDV4_9RHOD5.080e-7256.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A835ZGC7_9STRA9.410e-7251.12UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1XFC8_9RHOD8.520e-7156.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A830HNH6_9CHLO4.960e-6655.66Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:505359..507776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|164760|e_gw1.33.68.1
DescriptionUPF0126 domain
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2B6TB@1|root,2S0MY@2759|Eukaryota
Evalue2.02e-102
Seed ortholog2880.D8LE41
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised domain UPF0126
Ec32 orthologEc-05_004160.1
TranscriptId165082
TrackFilteredModels1
ProteinId164760
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164760gene_5955Tribonema minus UTEX_B_3156 geneContig_33 505359..507776 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164760Trimin1|164760|e_gw1.33.68.1Tribonema minus UTEX_B_3156 polypeptideContig_33 505359..507776 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5955_3exon_5955_3Tribonema minus UTEX_B_3156 exonContig_33 505359..505958 -
exon_5955_2exon_5955_2Tribonema minus UTEX_B_3156 exonContig_33 507142..507312 -
exon_5955_1exon_5955_1Tribonema minus UTEX_B_3156 exonContig_33 507657..507776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5955CDS_5955Tribonema minus UTEX_B_3156 CDSContig_33 507657..507776 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5955 ID=mRNA_5955|Name=jgi.p|Trimin1|164760|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=891bp|location=Sequence derived from alignment at Contig_33:505359..507776- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGAGGCAGTAAAACCTGCCAAGCCAAAGAAGCTGCCGCCGCCTCC
TCCGCCCCATGAGGATGGACTTACACGCTATCCAAGCCTGTCGTCGCCCC
AGGGCGTGCTCCGCGGACTGGACCTCTTTGGAACGGTGGTGTTCGCCTAT
TCGGGATGCGTGACTGCGGGACAGGCGGGCATGGACCTGCTTGGATGCAC
AATCGTAGGCACCATCACAGCGGTGGGGGGTGGTACTGTTCGTGACCTGT
TGCTGGGAAACACTCCCGTCTTCTGGATGACGGAGACTGAGTACCTGTAC
ATCTGCCTGGCGGCGGCCGTCGGCACCTTCTTCACCTACTCTGCGCTCGC
GGAGCAGGGCTTCACCACGGACAGCGAGCTGCTGAACTGGGCCGACGCGC
TCGGCGTGGGCGCCTTCTGCGTCATCGGCGCGCAGAACGCGGTGCGGCGG
CGCCTGAGCACTGCCATCTGCGTCGCGTGCGGCATGTTCACGGCGACGTT
CGGCGGCGTGATCCGCGACGTCCTGTGCCAGCGCCCGCCGCGCATCCTGC
ACTCGCACGCGGAGATCTATGCGTCGACGGCGCTCGTGGGCGCGGGGACG
TACATGGCGCTGCGGCGCGCGCGCGCGACGCCCATGCTGCGCATCGCCGG
CGGCTTCGGCGCCGCCTTCGCGTTGCGCATCGCCGCGTGGAAGCTGCAGC
TGCGCCTGCCGACGTGGGCGCAGTCGCCGCAGCCACAGCAGCCGCTGCGC
ACGGCGGAGGCGGAGCGCGCCATCGCGCGCGCCGTGGAGGGCGCCGCCGA
CAGCGACGCCGCCGGCGCCGCCGCCGCCGCGGTGTCCGCCGCTGCTGCTG
CCGCGCTGGCGAAGAGCGCTGCGGACCCGTCCAAGCGGTAG
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protein sequence of jgi.p|Trimin1|164760

>Trimin1|164760|e_gw1.33.68.1 ID=Trimin1|164760|e_gw1.33.68.1|Name=jgi.p|Trimin1|164760|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=297bp
MSEAVKPAKPKKLPPPPPPHEDGLTRYPSLSSPQGVLRGLDLFGTVVFAY
SGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLY
ICLAAAVGTFFTYSALAEQGFTTDSELLNWADALGVGAFCVIGAQNAVRR
RLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGT
YMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLPTWAQSPQPQQPLR
TAEAERAIARAVEGAADSDAAGAAAAAVSAAAAAALAKSAADPSKR*
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mRNA from alignment at Contig_33:505359..507776-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5955 ID=mRNA_5955|Name=jgi.p|Trimin1|164760|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2418bp|location=Sequence derived from alignment at Contig_33:505359..507776- (Tribonema minus UTEX_B_3156 )
ATGAGCGAGGCAGTAAAACCTGCCAAGCCAAAGAAGCTGCCGCCGCCTCC TCCGCCCCATGAGGATGGACTTACACGCTATCCAAGCCTGTCGTCGCCCC AGGGCGTGCTCCGCGGACTGGTTCGTAAAAAGTTTTTCCTGGAAAGTGGT GACTGCTGAAATTACTCTTATCTACTGTATAGCTGCGTTACCGTTAACTC CATGTTCGCAGGCCGAAGTGTCATCATCAAGCACAATCATGGTCATTTCT GATCTTACTCCTGCTTGCGCTGCAACGGCGTCAACACTTGTCATGCTCAG CACAGTAGGCTGGTCACACATGTTTCAGTTGCTAGCACCATGTCACACCC ACATTCTTCGCATTGTTCACACCATCGCTTGCACATGACCACAAATCAGC TTGCAAATCCCTGATGAACGCAGTCGACTGACCTGCTCGCGTTCATGCGC TCCTGTGCCCACAGGACCTCTTTGGAACGGTGGTGTTCGCCTATTCGGGA TGCGTGACTGCGGGACAGGCGGGCATGGACCTGCTTGGATGCACAATCGT AGGCACCATCACAGCGGTGGGGGGTGGTACTGTTCGTGACCTGTTGCTGG GAAACACTCCCGTCTTCTGGATGACGGAGACTGAGGTGATGCTCAACTGT GCTTGTTGCACAGTGCCTCAATCGTGAACTTTCAAATCATCCAATTGCGT GTTAAGCCTTCGAAAGTAAGCGATGCGTTGAATGCCGGGCACTGTATGCA GTGTGTTGTTCGCACACAATGCCACACGTTCCTTGCTGGAGCGCTGCTTA GCAGCCCTCTTGCCAAATTTGAATGCCAAAAGCATACTGCTCACATTGTG CTAGGTTTTGATGCATCATGTGGCAGAGGTTTCAACGGTCACATCACAGC ACACCTGATATTGACTTGGCCTATCTTGATAAGGGCCAGTGCCTGCTGAA GCATTGTATACCTTGACAACGACCAGTGCCGGCAGCAGCAGCGGACGCAC ACCAGTGCGCTGCATCATTGATCACGCCCAATTATATGGATCAAAGGACA TGGCTGTACTCTGCAGCGGTGCTTTGAGTGTCTGAGGGCTACACACAGTA CCATGCATACCCCACATGGCATATCGCCCATGCGCGACACCGCTTGAGCA AGCTATTGCGTCTAGCAAGGTTTAAACTGCAGACTCCTGAGCAGCCCGAC GTTAGGCCAAGGCAATAGCAATTCATGCAGTGTATGGCAAGCTGGAGGTT CTACCAGCAGGTGATGATGTGCTTTATCACCATTTGAGTTTGCAACTCCC ACGCGCTCAAAGTCCAGGAGATTCAAAGTGTCTCCAAGAGTTGCGTTCTA ATCTATTTAAAACAACTCTTTGAGCCCTACTGCGTGGTATCTACTCTCTG CTCTGTCGCCGTTCACACCAGCACGCGCCTTAGCAGCAGCATAACGCCTG CCCTTTCATCCTTTTGACTGGTTTGTGCACCGCGACACTTGGGCGTTCAA ATCCAAGCAAGTACTGCTTGCATTGCGTCTCTGCGCGCATCATGCTTGCT GTTAGCGCCAGACTGTCACGTGTCTAAATCGCAGCGCTTAGAGTACTGTG CATACATGAAGTAAGTCTTTTTTTCGATGAACTGCTGTTACACAGCACTT GCCCATCTGCCCAGCGGACAGCGTCTGCATGCCCCCTCTCATGCTCTTCA CTCGCTTCACGAGCTCCCGCACCAGAGGGCACTCCACAACAACTTCATCA CAACTTCACCTGTTGACGCACCCCCCTCCCCCCCCCTCCATCACCCCCCC CCCCCCGCGCGCGCACAGTACCTGTACATCTGCCTGGCGGCGGCCGTCGG CACCTTCTTCACCTACTCTGCGCTCGCGGAGCAGGGCTTCACCACGGACA GCGAGCTGCTGAACTGGGCCGACGCGCTCGGCGTGGGCGCCTTCTGCGTC ATCGGCGCGCAGAACGCGGTGCGGCGGCGCCTGAGCACTGCCATCTGCGT CGCGTGCGGCATGTTCACGGCGACGTTCGGCGGCGTGATCCGCGACGTCC TGTGCCAGCGCCCGCCGCGCATCCTGCACTCGCACGCGGAGATCTATGCG TCGACGGCGCTCGTGGGCGCGGGGACGTACATGGCGCTGCGGCGCGCGCG CGCGACGCCCATGCTGCGCATCGCCGGCGGCTTCGGCGCCGCCTTCGCGT TGCGCATCGCCGCGTGGAAGCTGCAGCTGCGCCTGCCGACGTGGGCGCAG TCGCCGCAGCCACAGCAGCCGCTGCGCACGGCGGAGGCGGAGCGCGCCAT CGCGCGCGCCGTGGAGGGCGCCGCCGACAGCGACGCCGCCGGCGCCGCCG CCGCCGCGGTGTCCGCCGCTGCTGCTGCCGCGCTGGCGAAGAGCGCTGCG GACCCGTCCAAGCGGTAG
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Coding sequence (CDS) from alignment at Contig_33:505359..507776-

>mRNA_5955 ID=mRNA_5955|Name=jgi.p|Trimin1|164760|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=891bp|location=Sequence derived from alignment at Contig_33:505359..507776- (Tribonema minus UTEX_B_3156 )
ATGAGCGAGGCAGTAAAACCTGCCAAGCCAAAGAAGCTGCCGCCGCCTCC
TCCGCCCCATGAGGATGGACTTACACGCTATCCAAGCCTGTCGTCGCCCC
AGGGCGTGCTCCGCGGACTGGACCTCTTTGGAACGGTGGTGTTCGCCTAT
TCGGGATGCGTGACTGCGGGACAGGCGGGCATGGACCTGCTTGGATGCAC
AATCGTAGGCACCATCACAGCGGTGGGGGGTGGTACTGTTCGTGACCTGT
TGCTGGGAAACACTCCCGTCTTCTGGATGACGGAGACTGAGTACCTGTAC
ATCTGCCTGGCGGCGGCCGTCGGCACCTTCTTCACCTACTCTGCGCTCGC
GGAGCAGGGCTTCACCACGGACAGCGAGCTGCTGAACTGGGCCGACGCGC
TCGGCGTGGGCGCCTTCTGCGTCATCGGCGCGCAGAACGCGGTGCGGCGG
CGCCTGAGCACTGCCATCTGCGTCGCGTGCGGCATGTTCACGGCGACGTT
CGGCGGCGTGATCCGCGACGTCCTGTGCCAGCGCCCGCCGCGCATCCTGC
ACTCGCACGCGGAGATCTATGCGTCGACGGCGCTCGTGGGCGCGGGGACG
TACATGGCGCTGCGGCGCGCGCGCGCGACGCCCATGCTGCGCATCGCCGG
CGGCTTCGGCGCCGCCTTCGCGTTGCGCATCGCCGCGTGGAAGCTGCAGC
TGCGCCTGCCGACGTGGGCGCAGTCGCCGCAGCCACAGCAGCCGCTGCGC
ACGGCGGAGGCGGAGCGCGCCATCGCGCGCGCCGTGGAGGGCGCCGCCGA
CAGCGACGCCGCCGGCGCCGCCGCCGCCGCGGTGTCCGCCGCTGCTGCTG
CCGCGCTGGCGAAGAGCGCTGCGGACCCGTCCAAGCGGTAG
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