Trimin1|348907|estExt_Genemark1.C_Ctg_320126 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348907
Unique NameTrimin1|348907|estExt_Genemark1.C_Ctg_320126
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length215
Homology
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A835YW33_9STRA (Transcription factor Pcc1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW33_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.720e-113
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:    1 MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP 214
            MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP
Sbjct:    1 MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVXXXXXXXXXXXXXQAASGHAQGKEPVRSRPPATAAAESEXXXXXXXXGRAHKRPRARVAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAXXXXXXXXXXXLSAPP 214          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: D7FJ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ03_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.470e-18
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    5 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETG 86
            PY C  E+ +PS + A IA  ++ VD ELQPNK+ RTL ++G+ L+A+F ATEA+ LRV +S F D A++V+RT LEFD+ G
Sbjct:    4 PYHCDAEVTFPSASLATIACRTLAVDAELQPNKIIRTLRVEGSSLLAKFEATEARTLRVVLSGFYDMASVVARTFLEFDDGG 85          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A2D4BZ60_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ60_PYTIN)

HSP 1 Score: 79.0 bits (193), Expect = 9.190e-16
Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    2 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            A  PY C++ L +P    A  A  +++VDEELQP K+ RTL ++G+ L+  F ATE ++LR +VS+F D A LVSRT+LEF +
Sbjct:    3 ATHPYECEIALSFPEAEDAQHAMMTIQVDEELQPEKIHRTLSVNGSDLIVHFEATEIRLLRAAVSSFYDMALLVSRTLLEFKD 85          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: K3WQ75_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ75_GLOUD)

HSP 1 Score: 78.2 bits (191), Expect = 1.770e-15
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    2 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            A  PY C + L +P    AA A  ++ VD ELQP+K++RTL ++G  L+  F ATE ++LR +VS+F D   LV+RT+LEF E
Sbjct:    3 ATHPYECDISLAFPEAVDAAYALETLRVDAELQPDKITRTLAVEGTNLVVHFEATEIRLLRAAVSSFYDMGLLVARTLLEFKE 85          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A8K1CRT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRT8_PYTOL)

HSP 1 Score: 76.6 bits (187), Expect = 7.080e-15
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    2 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            A  PY C + L +P    A  A  +++VDEELQP+K+ R+L +DG  L+  F ATE ++LR +V++F D + LV+RT+LEF E
Sbjct:    4 ATHPYECDIRLSFPEAEDAEHAMLTIQVDEELQPDKIHRSLSVDGTDLIVHFEATEIRLLRAAVASFYDMSLLVARTLLEFKE 86          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A5D6XF77_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF77_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.430e-14
Identity = 37/80 (46.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    5 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            P+ C ++L +P+   A  A  +++VD E+QP+K+ RTL +DG  L A F ATE ++LR +V++F D A LV+RT+LEF E
Sbjct:    6 PFECDVQLVFPAPLDAQYALETLQVDGEIQPDKIHRTLAVDGAALTAHFEATEIRLLRAAVASFYDMALLVARTLLEFKE 85          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: V9EW72_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=V9EW72_PHYPR)

HSP 1 Score: 73.6 bits (179), Expect = 1.070e-13
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    2 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            A  P+ C++ L +P E  A     ++EVDEELQP K+ RTL + G +L   F ATE ++LR +VS+F D + L +R +LEF E
Sbjct:    4 AKHPFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 86          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A3F2S3U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3U4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.110e-13
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    5 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            P+ C + L +P E  A     ++EVDEELQP+K+ RTL + G +L   F ATE ++LR +VS+F D   L +RT+LEF E
Sbjct:    7 PFECDVCLTFPEEVDAQYVLQTLEVDEELQPDKIHRTLSIKGAELHVHFEATEIRLLRAAVSSFYDMGLLTARTLLEFKE 86          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: A0A484E6M7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6M7_BRELC)

HSP 1 Score: 72.4 bits (176), Expect = 3.550e-13
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    5 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEF 82
            P+ CK+ LR+  +  A     ++EVDEELQP K+ RTL + G +L+   AATE ++LR +VS+F D + L +RT+LEF
Sbjct:   15 PFECKMTLRFTDKLDALYVLRTLEVDEELQPKKIIRTLTVKGTELLVHIAATEIRLLRAAVSSFYDMSMLSARTLLEF 92          
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Match: W2PBF0_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PBF0_PHYPN)

HSP 1 Score: 73.9 bits (180), Expect = 6.510e-13
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    2 AARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDE 84
            A  P+ C++ L +P E  A     ++EVDEELQP K+ RTL + G +L   F ATE ++LR +VS+F D + L +R +LEF E
Sbjct:   93 ATHPFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 175          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348907 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YW33_9STRA1.720e-113100.00Transcription factor Pcc1-domain-containing protei... [more]
D7FJ03_ECTSI4.470e-1852.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BZ60_PYTIN9.190e-1648.19Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WQ75_GLOUD1.770e-1546.99Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CRT8_PYTOL7.080e-1545.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XF77_9STRA7.430e-1446.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
V9EW72_PHYPR1.070e-1344.58Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3F2S3U4_9STRA2.110e-1346.25Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A484E6M7_BRELC3.550e-1346.15Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W2PBF0_PHYPN6.510e-1344.58Uncharacterized protein n=5 Tax=Phytophthora paras... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.310.50coord: 2..86
e-value: 6.0E-22
score: 79.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..156
NoneNo IPR availablePANTHERPTHR31283:SF5GEO08993P1coord: 6..84
IPR015419CTAG/Pcc1 familyPFAMPF09341Pcc1coord: 8..79
e-value: 1.3E-18
score: 66.9
IPR015419CTAG/Pcc1 familyPANTHERPTHR31283EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBERcoord: 6..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:940724..944693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348907mRNA_5285Tribonema minus UTEX_B_3156 mRNAContig_32 940676..944693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348907|estExt_Genemark1.C_Ctg_320126 ID=Trimin1|348907|estExt_Genemark1.C_Ctg_320126|Name=jgi.p|Trimin1|348907|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=215bp
MAARPYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLM
AQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETGGSGSTAVAAAAAAS
AAAPAAQAASGHAQGKEPVRSRPPATAAAESEAAARPTATGRAHKRPRAR
VAGSVAATSFVPAGGTGRGDASNGGGVQLQLHNARDLQEVHWVTMANAAE
AAEAAAAAALSAPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015419CTAG/Pcc1