Trimin1|348891|estExt_Genemark1.C_Ctg_320102 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348891
Unique NameTrimin1|348891|estExt_Genemark1.C_Ctg_320102
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length133
Homology
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BLAST of jgi.p|Trimin1|348891 vs. uniprot
Match: A0A835YZS6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS6_9STRA)

HSP 1 Score: 279 bits (713), Expect = 2.810e-95
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 MGQSNYPQKALKCKSSMTEPFGQTICPEFANNFCVKEIMGMNAIAKANCGRTKYFGDTYNQKSGKCELRKCAAACEESAWSYEFEGITYQRQRFCCNYEFCNAGGQTRPNTALLGVLVPVAMALAYALASML 132
            MGQSNYPQKALKCKSSMTEPFGQTICPEFANNFCVKEIMGMNAIAKANCGRTKYFGDTYNQKSGKCELRKCAAACEESAWSYEFEGITYQRQRFCCNYEFCNAGGQTRPNTALLGVLVPVAMALAYALASML
Sbjct:    1 MGQSNYPQKALKCKSSMTEPFGQTICPEFANNFCVKEIMGMNAIAKANCGRTKYFGDTYNQKSGKCELRKCAAACEESAWSYEFEGITYQRQRFCCNYEFCNAGGQTRPNTALLGVLVPVAMALAYALASML 132
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BLAST of jgi.p|Trimin1|348891 vs. uniprot
Match: D8LSN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN0_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.820e-36
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 0 
Query:    4 SNYPQKALKCKSSMTEPFGQTICPEFANNFCVKEIMGMNAIAKANCGRTKYFGDTYNQKSGKCELRKCAAACEESAWSYEFEGITYQRQRFCCNYEFCN 102
            + YPQ AL+C +S+ EP G  ICPE  N +CVKE+   + +A+ +CGRT YFGD +N ++GKCE RKC A C ES+W +EFEG  Y+R RFCC++ +CN
Sbjct:   13 ARYPQDALRCLASLKEPEGLLICPEHRNGYCVKEV---SDLAEEDCGRTTYFGDKWNAQTGKCEYRKCEATCLESSWDFEFEGEAYERNRFCCDFNYCN 108
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348891 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YZS6_9STRA2.810e-95100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSN0_ECTSI4.820e-3653.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:786700..787878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348891mRNA_5259Tribonema minus UTEX_B_3156 mRNAContig_32 786700..787889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348891|estExt_Genemark1.C_Ctg_320102 ID=Trimin1|348891|estExt_Genemark1.C_Ctg_320102|Name=jgi.p|Trimin1|348891|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MGQSNYPQKALKCKSSMTEPFGQTICPEFANNFCVKEIMGMNAIAKANCG
RTKYFGDTYNQKSGKCELRKCAAACEESAWSYEFEGITYQRQRFCCNYEF
CNAGGQTRPNTALLGVLVPVAMALAYALASML*
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