Trimin1|348871|estExt_Genemark1.C_Ctg_320079 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348871
Unique NameTrimin1|348871|estExt_Genemark1.C_Ctg_320079
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length166
Homology
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 303 bits (776), Expect = 8.280e-104
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV 165
            MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV
Sbjct:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTFV 165          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 7.050e-49
Identity = 91/163 (55.83%), Postives = 122/163 (74.85%), Query Frame = 0
Query:    6 RLINMGLCVLLSATAVLELIGLP-NFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTA-STFV 165
            R+ N+ LC +L+ATAVL+LIG   +    VLA YL AF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+FVG+LCFS  S + +++G  M+ +++FNF+VI KYPE +   QRKDLES  RD++R N+GA+A+ GV FA+NNP  A   A+ A ST+V
Sbjct:   59 RVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.400e-26
Identity = 70/147 (47.62%), Postives = 98/147 (66.67%), Query Frame = 0
Query:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQT---LVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE-VQNQQRKDLESSSRDFVRNNQGAIARQG 143
            +VI  R+ N  LC+L+SA AVL +I +P   T    VLA Y+ AF+C+LCCFE ++  +A   A+NFGFLY+AK RA FL+FVG+LCFS G I G ++G AMIA+++FN  V+ KYP+   N      E  +  F++ N G +AR+G
Sbjct:   82 LVIYMRVANFALCILMSAAAVLTVI-VPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKG 225          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 105 bits (263), Expect = 1.160e-25
Identity = 50/117 (42.74%), Postives = 84/117 (71.79%), Query Frame = 0
Query:   19 TAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNN 135
            T++L ++   +  T VLA Y+  F+C+LCCFETH+  ++ + A NFGF+Y+AK R+LF++F+G + FSF S+ G I G+ M+A++ FN F + +YP+ ++ QRKD +S  +D++ +N
Sbjct:    4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYEDMQRKDAQSEIQDYLASN 119          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S4EDS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDS9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 7.050e-25
Identity = 50/119 (42.02%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ 119
            ++I  RL+NMG+ +L++A A+++L+ LP F   VL +Y++ FA ++CCFETH++ ++ +   NFGFLYN KGR  F + V  LCFS G ++G ISG+ ++  + +N +VI K+P+ + +
Sbjct:   86 LIISMRLLNMGVSILMAAAAIIKLLSLPAFTKGVLCLYIWFFALLICCFETHLAQVSRIIGENFGFLYNVKGRVTFFILVSFLCFSIG-LIGLISGVGLLVAAAYNAYVIYKHPDYERE 203          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.330e-20
Identity = 53/160 (33.12%), Postives = 89/160 (55.62%), Query Frame = 0
Query:    6 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTASTF 164
            RL N+ L  L+  +AV   +   +    ++  Y+  F C+ CC+ETH+  ++   A NFGFLYNAK R LF++ +  LC++  +I+G I+    +A    N +V+ K+P  Q+Q +  DL     + +   Q   ++  V++A+ NP Q  AAAR+A  +
Sbjct:   95 RLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTL-NIIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETI---QDMASQYAVSYARENPDQVQAAARSAGKW 250          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.360e-19
Identity = 58/166 (34.94%), Postives = 93/166 (56.02%), Query Frame = 0
Query:    6 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE----VQNQQRKD---------LESSSRDFVRNNQ---GAIARQGVAFAQNNPQQAA 155
            RL N+ + VL+   A+   I   +  T V+A+Y+  F C++CCFETH+  ++ + A NFGF+YNAKGR +F++ +  LC +  ++ G I+G  M   +++N +VI  +PE     Q   RK           +S +  +V+NN     A+A  G  +A NNP+ AA
Sbjct:   96 RLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTL-NVFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVAA 260          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7R9U1Y8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1Y8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.260e-17
Identity = 52/150 (34.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query:    6 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAA 155
            R++N+G   +LS T+++  IG  N  + ++A+Y++ FA +LCCFE H++ +A+   S FGF+Y    R +F+L +  L F+ G ILG++SG  ++  ++   F+   YPE +  Q K  E+   D   N         +A+A+ NP+QAA
Sbjct:   97 RILNIGTATMLSITSLIVFIGSVNASSAIIALYVWLFAMLLCCFEVHLAAVANFLLSKFGFIYKPVPRVMFMLLIAGLSFNLG-ILGWVSGGLLVFSAVATTFLYCTYPEFREMQYKVAEA---DLQSN--------AMAWARANPEQAA 234          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.550e-16
Identity = 64/160 (40.00%), Postives = 87/160 (54.37%), Query Frame = 0
Query:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQT---LVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE-VQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAA 156
            +VI  R+ N  LC+L+SA AVL +I +P   T    VLA Y+                +A   A+NFGFLY+AK RA FL+FVG+LCFS G I G ++G AMIA+++FN  V+ KYP+   N      E  +  F++ N G   + G A       Q AA
Sbjct:   82 LVIYMRVANFALCILMSAAAVLTVI-VPAGATPASWVLAFYVL---------------VAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARKVGGAMINAAGSQPAA 224          
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.210e-13
Identity = 45/123 (36.59%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    2 VILTRLINMGLCVLLSATAVLELI-GLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSI--LGYISGIAMIADSIFNFFVILKYPEVQNQQR 121
            ++L R+ N+    LL+  A L+L     +  + V++ YLFAFA ++  FE H+SF+  + A N GF+Y A GRA F++ +G+LCFS   +   GY  GI +I  ++ N F++ K+P  +   R
Sbjct:   93 IVLMRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFKFPNYERSCR 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348871 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A836CFZ2_9STRA8.280e-104100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTB9_ECTSI7.050e-4955.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TT71_9STRA1.400e-2647.62Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A482T2R9_9ARCH1.160e-2542.74Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S4EDS9_9STRA7.050e-2542.02Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2MMX0_9STRA6.330e-2033.13Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WC07_9STRA1.360e-1934.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U1Y8_9STRA1.260e-1734.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D7K6_9STRA5.550e-1640.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3JYJ7_9STRA2.210e-1336.59Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 4..123
e-value: 3.6E-14
score: 52.9
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 4..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:610801..613843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348871mRNA_5233Tribonema minus UTEX_B_3156 mRNAContig_32 609726..614129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348871|estExt_Genemark1.C_Ctg_320079 ID=Trimin1|348871|estExt_Genemark1.C_Ctg_320079|Name=jgi.p|Trimin1|348871|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=166bp
MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFE
THISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMI
ADSIFNFFVILKYPEVQNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNN
PQQAAAAARTASTFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15