Trimin1|348859|estExt_Genemark1.C_Ctg_320064 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348859
Unique NameTrimin1|348859|estExt_Genemark1.C_Ctg_320064
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length475
Homology
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Match: A0A836CFY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY7_9STRA)

HSP 1 Score: 753 bits (1944), Expect = 1.660e-271
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query:    1 MLSREGPIVQVRNPPFAAAALAKREGGALTHPHSHTASPSQLKRPLPPPTSGSSQASGGDGSVVAEAAIPDTVDQSQVSCLLVFAEMRAWRSVAAAAEALPASGALSPSDAADVRMCRATALLRMRHVDDAQAELQRVQRASAAAATPAPFAAELLALQIGLFKGTLSSDDAIASLGTLKRALDARIAAAAASPATESGYTXXXXXXXXXXXLTAQEAVRWRRRVRTTLASAFQVMGRWRAALAELQANDDDLRGVLASGXXXXXXXXXXXXXXLAARGEVNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474
            MLSREGPIVQVRNPPFAAAALAKREGGALTHPHSHTASPSQLKRPLPPPTSGSSQASGGDGSVVAEAAIPDTVDQSQVSCLLVFAEMRAWRSVAAAAEALPASGALSPSDAADVRMCRATALLRMRHVDDAQAELQRVQRASAAAATPAPFAAELLALQIGLFKGTLSSDDAIASLGTLKRALDARIAAAAASPATESGYTXXXXXXXXXXXLTAQEAVRWRRRVRTTLASAFQVMGRWRAALAELQANDDDLRGVLASGXXXXXXXXXXXXXXLAARGEVNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM
Sbjct:    1 MLSREGPIVQVRNPPFAAAALAKREGGALTHPHSHTASPSQLKRPLPPPTSGSSQASGGDGSVVAEAAIPDTVDQSQVSCLLVFAEMRAWRSVAAAAEALPASGALSPSDAADVRMCRATALLRMRHVDDAQAELQRVQRASAAAATPAPFAAELLALQIGLFKGTLSSDDAIASLGTLKRALDARIAAAAASPATESGYTXXXXXXXXXXXLTAQEAVRWRRRVRTTLASAFQVMGRWRAALAELQANDDDLRGVLASGXXXXXXXXXXXXXXLAARGEVNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474          
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Match: A0A024U3P4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3P4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.120e-6
Identity = 57/194 (29.38%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  283 SRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALH--RAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474
            SR+GR++LQ+GD+        RAE ++A A +      D+  H   A+ L+N GLL FA + F+           EA  A     G                       ++++AA+N ++  LY+C+V  A+   E   + DP   L     FNL TLYDL    A S  RK  +  LA  ++++ +D   FR+
Sbjct:  509 SRLGRIYLQLGDL-------TRAEELFADAAAFNL-QIDSPRHDCSARLLLNQGLLHFAHNRFK-----------EALDAFNTILGVYSGDDAVDHDSTEPFASWDDGDVVSSAANNMSICALYSCEVQTAVTVLETVLQSDPRRHLHSAIVFNLSTLYDLVCDSANSTNRKGMIKRLADTYNVEHIDTACFRI 683          
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Match: F0WJF3_9STRA (Uncharacterized protein AlNc14C121G6682 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJF3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.160e-6
Identity = 60/194 (30.93%), Postives = 86/194 (44.33%), Query Frame = 0
Query:  281 VNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474
            V SRIGR+++Q+GD+ SA   +     +     S      +  LH AQ L+N GLL  +R + + A E              LA G               +       L+ AA +N A+  LY+CDV  A+A  E   R  P   L +   FNL +LYDL    A S  RK  L  +A  + L+ +D  +FR+
Sbjct:  585 VLSRIGRIYMQLGDIESAEMVFQHVRHLSEKLPSH----QNQTLH-AQVLMNKGLLLLSRDNVQEAIEIFSSI-----LHLELANGQTKNSQWSNEIVLDDLLLEQED-LICAAVNNYAICALYSCDVHGAVAMLEKMIRLSPVRFLNEVVVFNLSSLYDLIYDNANSTNRKEMLKRIADAYDLEHIDAAAFRI 767          
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Match: W4H768_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H768_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.490e-5
Identity = 54/195 (27.69%), Postives = 88/195 (45.13%), Query Frame = 0
Query:  283 SRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHR---AQALINAGLLAFARSDFRGAAERHERAAAEARTARTLAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474
            SR+GR++LQ+GD+        RAE ++A A +  A  +D   H    A+ L+N GLL FA + F+ A +             T+                          ++++AA+N ++  LY+C V  A+   E   + DP   L     FNL TLYDL      S  RK  +  +A+ ++++ +D   FR+
Sbjct:  491 SRLGRIYLQVGDLR-------RAEGLFADAAALSAEISDP--HHDCAARVLLNQGLLHFAHNRFKEALDAFN----------TILGVYSGDDDPDDDWGDECFAWWDDGDVVSSAANNMSICALYSCQVQTAVTVLETVLQSDPRRHLHSAVVFNLSTLYDLVCDNVNSTNRKNMIKRVAEAYNVEHIDNACFRI 666          
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Match: A0A024G727_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G727_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 6.230e-5
Identity = 57/199 (28.64%), Postives = 85/199 (42.71%), Query Frame = 0
Query:  281 VNSRIGRVFLQIGDVHSATTFYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERHERAAAEARTART-----LAAGXXXXXXXXXXXXXXXVEXXXXXALLAAAASNAALAHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSATRKAALAALAQRFSLDDVDVGSFRM 474
            V SRIGR+++Q+GD+ SA   +     +     S    + +      Q L+N GLL  +R + + A            T R+     LA G                       L+ AA +N A+  LY+CDV  A+   E   R  P   L +   FNL +LYDL    A S  RK  L  +A  ++L+ +D  +FR+
Sbjct:  565 VLSRIGRIYMQLGDIESAEILFKHVSVL-----SEKLSSDEKQPGHPQVLMNKGLLLLSRDNIQEAIH----------TFRSILHLGLAEGKAQNDKWSNTILPDEDLMLEQGELICAAVNNYAICALYSCDVHGAVTMLERMIRLCPLRFLNEVVVFNLSSLYDLIYDNANSTNRKEMLKRIADLYNLEHIDAAAFRI 748          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348859 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CFY7_9STRA1.660e-271100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024U3P4_9STRA2.120e-629.38Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
F0WJF3_9STRA5.160e-630.93Uncharacterized protein AlNc14C121G6682 n=1 Tax=Al... [more]
W4H768_9STRA4.490e-527.69Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024G727_9STRA6.230e-528.64Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availablePANTHERPTHR21581D-ALANYL-D-ALANINE CARBOXYPEPTIDASEcoord: 65..468
NoneNo IPR availablePANTHERPTHR21581:SF6TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 12coord: 65..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_32contigContig_32:518627..520051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348859mRNA_5218Tribonema minus UTEX_B_3156 mRNAContig_32 518627..520343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348859|estExt_Genemark1.C_Ctg_320064 ID=Trimin1|348859|estExt_Genemark1.C_Ctg_320064|Name=jgi.p|Trimin1|348859|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=475bp
MLSREGPIVQVRNPPFAAAALAKREGGALTHPHSHTASPSQLKRPLPPPT
SGSSQASGGDGSVVAEAAIPDTVDQSQVSCLLVFAEMRAWRSVAAAAEAL
PASGALSPSDAADVRMCRATALLRMRHVDDAQAELQRVQRASAAAATPAP
FAAELLALQIGLFKGTLSSDDAIASLGTLKRALDARIAAAAASPATESGY
TAAAAAAAAAAALTAQEAVRWRRRVRTTLASAFQVMGRWRAALAELQAND
DDLRGVLASGGSSSSSGGGGSAALLAARGEVNSRIGRVFLQIGDVHSATT
FYNRAERMWAAAGSSGAGAADAALHRAQALINAGLLAFARSDFRGAAERH
ERAAAEARTARTLAAGGGGGGGGGSGAACAGVEGEGAGALLAAAASNAAL
AHLYACDVARALAAAEGAAREDPAAALRDTTAFNLCTLYDLGGGPAGSAT
RKAALAALAQRFSLDDVDVGSFRM*
back to top