Trimin1|348810|estExt_Genemark1.C_Ctg_310106 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348810
Unique NameTrimin1|348810|estExt_Genemark1.C_Ctg_310106
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length281
Homology
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA)

HSP 1 Score: 522 bits (1345), Expect = 9.800e-187
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query:    1 MFNYGGGPPLAFTAPFTGEVVGNVVAAYVADDQGITVFLAAAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGVAARGSSRDDDVYRTLVRRAAGALALSATFTGENEAIRNRQGVGSTATEARSSSVVITPARYS 280
            MFNYGGGPPLAFTAPFTGEVVGNVVAAYVADDQGITVFLAAAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGVAARGSSRDDDVYRTLVRRAAGALALSATFTGENEAIRNRQGVGSTATEARSSSVVITPARYS
Sbjct:    1 MFNYGGGPPLAFTAPFTGEVVGNVVAAYVADDQGITVFLAAAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGVAARGSSRDDDVYRTLVRRAAGALALSATFTGENEAIRNRQGVGSTATEARSSSVVITPARYS 280          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.320e-34
Identity = 86/237 (36.29%), Postives = 114/237 (48.10%), Query Frame = 0
Query:   45 GCFFAEKAFMLGKRNTITA--TALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTK-LGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNE-------------------LKQSTADSALEAGVAAR-----------GSSRDDDVYRTLVRRAAGALALSATFT 248
            G FF  +A    KR+ +    T  LA+++ + Y  +EL Y+Y  + ++   C     W V+R+ SNALAFLHLFLRAD  N+INP+W  WRR GIAL V    +LI   A R   L+     G RC   YE VSF L WV QL+CH+            HM                     L+++    ++ A   AR           GS R D VY+ LVRRA  +L  S+ FT
Sbjct:   13 GWFFGARALQGSKRHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPFGERCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMRAVRAAGLAVAHTPRSFLRRVLRRTVQKPSVTATENARAREDSNTAPVTGSMRGDTVYQRLVRRAVISLVASSLFT 249          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.280e-32
Identity = 88/239 (36.82%), Postives = 117/239 (48.95%), Query Frame = 0
Query:   36 TVFLAAAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTC-KTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTAD-------------------------SALEAGVAARGSSRDDDVYRTLVRRAAGALALSATFT 248
            T F+ A   G FF E+  +L K N +  T  +A+LI V Y   +L YFY G  A+  +C +     GV +  SNALAFLHLFLRAD  N IN HW  WR  GIALT +NWA L+ A    R  ++ T    RC   ++  +F   WV QL+ HV           +HM E+ ++  +                         S   A   A GSSR  DV+R LV RA  ++A+S+ FT
Sbjct:   17 TTFIIALEVGWFFGERC-VLRKANAMNITGFMASLIAVTYCFLKLIYFYTG--AEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLL-AVCFTRTAVLATSGSQRCKFTFDQSTFEAKWVVQLLNHVVFSMMFVFPLRQHMKEMHRAGVEHQRQHAXXXXXXXXAPNSSVAMSTGSRTSAEPTATGSSRGADVFRRLVWRATLSMAISSAFT 251          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A836CF01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF01_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.680e-28
Identity = 64/161 (39.75%), Postives = 87/161 (54.04%), Query Frame = 0
Query:   46 CFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELK 206
            CFFAE+  ++ KRN IT TAL AA +  + T W+LAYF+ G M     CK   AWG++R+ S+ALAFLHLFLRA+ A          R  G  L + N  LL++ P+L  +T      G RC   +  V+F LMW +QL  HV            H+  ++
Sbjct:   24 CFFAERTLVMRKRNAITVTALAAAFLSSLNTVWQLAYFHLGKMTDLSICKIGYAWGIMRTTSSALAFLHLFLRANAAXXXXXXXXXXRAFGALLLLANVLLLVLVPSLWLLTPKRYDTGVRCVVIFPPVTFLLMWAAQLASHVVFAGLFVWPLLSHVRAMR 184          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835Z0T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.060e-28
Identity = 76/218 (34.86%), Postives = 111/218 (50.92%), Query Frame = 0
Query:   47 FFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGL-MAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGVAARG---------------SSRDDDVYRTLVRRAAGALALSATFT 248
            FF E+ ++  +RN + AT  LAA+I  VYT  +  + ++G+ +++ +  + +   G  + +SN  AFLHLFLRAD  N+INP W  WR VGI LTV NW   +    LR+ + I      RC   +E +S    WV QL+ HV           +HM  ++++  D+   AG  AR                SSR   VY  LVRRA   + +S+ FT
Sbjct:   41 FFGER-WLTMRRNMMNATGFLAAIIAAVYTLVKALHLFSGIGLSECNALRISLGLG--QGLSNGFAFLHLFLRADAINAINPKWPPWRAVGIVLTVANWVCFLAVSFLRKGSAIDQFGAERCVFYFEEISSNFKWVLQLINHVLFSLFFAWPLVKHMRAMERANMDTV--AGTVARSGFFSVLLYLLRRHRTSSRGVAVYERLVRRAVVPMVVSSVFT 253          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835Z8K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.240e-27
Identity = 77/223 (34.53%), Postives = 98/223 (43.95%), Query Frame = 0
Query:   56 GKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTK-LGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGV----------------AARGSSRDDD-------------VYRTLVRRAAGALALSATFT 248
            G RN I  T   A+LI   Y   EL YFY  +     +C    AW V+R ISN LAFLHLFLRA+  N+ NP W  WR  GI L +     +  A   R    +P      RC    E V FTL W++QL+CHV            HM +++ +   S++                    A+R SS  DD             VY+ LV RA  +L  SA FT
Sbjct:    6 GTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFT 228          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835Z9W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 8.720e-25
Identity = 63/166 (37.95%), Postives = 88/166 (53.01%), Query Frame = 0
Query:   45 GCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALR--RITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQS 208
            G FF  +  + G RN +  T  LA+L   +Y   EL Y++  +  Q  +C    A+ +LR  SN+LAFLHLFLRA+  NS+NP W  WRR GIALTV+   +L +  A R  + T  P    +RC      +  TL W  QL+CH+A           HM  L+++
Sbjct:   26 GWFFGMR-LVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPH-PSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKA 189          
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.110e-13
Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   58 RNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPT-KLG--ARCSAQYESVSFTL 178
            +  I  T LLA+++ + ++TW +  ++ GL             G+  S SNALAF+HLFL+AD +N +NP W +WR   I   V NW +L+V  AL      P   LG  ARC   +E  +F L
Sbjct:   39 KAVINLTGLLASVLTLFFSTWAITLWFTGL-GSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKL 161          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348810 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CG65_9STRA9.800e-187100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIT3_9STRA4.320e-3436.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9N7_9STRA4.280e-3236.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF01_9STRA2.680e-2839.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0T7_9STRA7.060e-2834.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8K2_9STRA6.240e-2734.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9W2_9STRA8.720e-2537.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKC7_9STRA1.110e-1337.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:885556..896911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348810mRNA_7442Tribonema minus UTEX_B_3156 mRNAContig_31 885556..897211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348810|estExt_Genemark1.C_Ctg_310106 ID=Trimin1|348810|estExt_Genemark1.C_Ctg_310106|Name=jgi.p|Trimin1|348810|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=281bp
MFNYGGGPPLAFTAPFTGEVVGNVVAAYVADDQGITVFLAAAMAGCFFAE
KAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAW
GVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVA
PALRRITLIPTKLGARCSAQYESVSFTLMWVSQLVCHVAFTLMFVYPLVR
HMNELKQSTADSALEAGVAARGSSRDDDVYRTLVRRAAGALALSATFTGE
NEAIRNRQGVGSTATEARSSSVVITPARYS*
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