Trimin1|348763|estExt_Genemark1.C_Ctg_310006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348763
Unique NameTrimin1|348763|estExt_Genemark1.C_Ctg_310006
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length941
Homology
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match: A0A835YXI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI0_9STRA)

HSP 1 Score: 994 bits (2571), Expect = 0.000e+0
Identity = 940/940 (100.00%), Postives = 940/940 (100.00%), Query Frame = 0
Query:    1 MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG 940
            MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG
Sbjct:    1 MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG 940          
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match: D7G7T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T6_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.220e-14
Identity = 118/310 (38.06%), Postives = 159/310 (51.29%), Query Frame = 0
Query:   23 ASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----PEG----EALPLMPAEVADAT----TNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSA----------QQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWS-WAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQG--EFGAGVTYVQLEAMVEELCTKFSPAPAAAA 306
            A+++NPY+  +SKK R L+KK EKI+KTE  +ASGK L++EQ++L+ TK L+E ++ EH  + A +E VAK       AEK       XXXXXXX       XXXXXXXXXXXX     PEG    +  P   AEVA AT     +T  + T  A VQT     P      PR VS A          ++  A  +A +          A    K+LRLLH  S +      LP  V  F  V+ G+  PP  +EADF++ +  + + A  Y+  + G  E   GV+Y  L+ MV  L ++    PAAAA
Sbjct:   90 ATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEERETAEKAKLLLAPXXXXXXXTGLSIAAXXXXXXXXXXXXXPAPGPEGGGPQDQQPA--AEVAVATESVGVSTDLLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKVLLGKTMPP--DEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAAAA 395          
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match: A0A6H5KV56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV56_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.110e-12
Identity = 120/310 (38.71%), Postives = 161/310 (51.94%), Query Frame = 0
Query:   23 ASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKG--EAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEAL----PLMPAEVADATTNTAAVG-------TAAASVQTAPQQEPAAALSKPRGVSSA----------QQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWS-WAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQG--EFGAGVTYVQLEAMVEELCTKFSPAPAAAA 306
            A+++NPY+  +SKK R L+KK EKI+KTE  +ASGK L++EQ++L+ TK L+E ++ EH  + A +E VAK   E  AAE  K     XXXXXXXXXX   XXXXXXXXXXXXXXX          P      A+    T +VG       T  A VQT  +  P      PR VS A          ++  A  +A +          A    K+LRLLHA S +      LP  V  F  V+ G+  PP  +EADF++ +  + + A  Y+  + G  E   GV+Y  L+ MV  L ++    PAA A
Sbjct:   45 ATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLAPXXXXXXXXXXGLSXXXXXXXXXXXXXXXXXXXXXXGGGPQDQQPAAEVAVETESVGVSTDPPATEEAEVQTDVKGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIVKGRKEAATGLSKVLRLLHAASRFEAKGQRLPTAVDFFSKVLLGKTVPP--DEADFDDCLAQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAATA 352          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YXI0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G7T6_ECTSI1.220e-1438.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV56_9PHAE1.110e-1238.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 816..846
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..940
NoneNo IPR availablePANTHERPTHR31001UNCHARACTERIZED TRANSCRIPTIONAL REGULATORY PROTEINcoord: 408..701
NoneNo IPR availablePANTHERPTHR31001:SF47FUNGAL SPECIFIC TRANSCRIPTION FACTOR DOMAIN-CONTAINING PROTEINcoord: 408..701

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:36434..42376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348763mRNA_7352Tribonema minus UTEX_B_3156 mRNAContig_31 36434..42376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348763|estExt_Genemark1.C_Ctg_310006 ID=Trimin1|348763|estExt_Genemark1.C_Ctg_310006|Name=jgi.p|Trimin1|348763|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=941bp
MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKT
EEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAE
AEKAAEEAAAEAEAAERAAATSTAEDEAAAEASAAEPEGEALPLMPAEVA
DATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQPA
AAAATAAAADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPP
PEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSP
APAAAAAAAAPPPQAQPAAARQPEQASKAQAAEPRAAQAKPSRPPQEQPQ
QPPVQSRAEQLRGGQEGGGGGSGGAQAGGAARVSDGPARASGEAAAQSAH
RGGSEHRERERRKQGEVRVPAAAAPAQPQRTAAPAGGGVVPQRATAPPSP
PPQQRQQQQQQAQRQRVVQQLQEPTQHQQQLPQQQQQALPGAQRAQQQQQ
KQPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAH
GTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRT
ATATMQAADTRRAPPGRGDRRDGGSSGSAGGSGGAGGGDASGGSGGGDGD
SGGRMKRSGRGGGARKSKQQTSDGVGAAAAEGAAAAALTDVQPQKQQQQQ
RRKPLPARQAPVAAPHATVPAAAEAAEQTAAAAAPTAMAATPKPPRPQRK
PTRQQQDGATAAAPAVGEENGSGGTAPAAVAASDGGSEGDKAGVRRNRRG
GSARRRAKPGGEETASTAMLDQQRQKQERAPAQQQQQQQQRQQPRRQPAP
AKAAAAPPADAAEQAKAAARNGSGGNGGNGGGGNGGGGGGAGGAGRGDGR
HRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG*
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