Homology
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match:
A0A835YXI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI0_9STRA)
HSP 1 Score: 994 bits (2571), Expect = 0.000e+0
Identity = 940/940 (100.00%), Postives = 940/940 (100.00%), Query Frame = 1
Query: 1 MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG 2820
MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG
Sbjct: 1 MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEALPLMPAEVADATTNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSAQQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWSWAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQGEFGAGVTYVQLEAMVEELCTKFSPAPAAAAAXAXXXXQAQPAAARQPEQASKAXXXXXRAXQAKPSRPXXXXXXXXPVQSRAEQLRGGQEGXXXXXXXXXXXXXARVSDGPARASGEAAAQSAHRGGSEHRERERRKQGEVRVPAAAAPAQPQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQRVVQQLQEPXXXXXXXXXXXXXALPGAQRAQQXXXXXPSPVKQERLHQPSQVPSAAQAKSAARPQGGAAAANMNSGRRDADKGAHGTNGVSTSAKAPAPLAVPTLQDPPTAPGWADEPMDTWAAPAGDAPTQGRTATATMQAADTRRAPPGRGDRRDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMKRSGRGXXARKSKQQTSDGVXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLPARQAPVAAPHATVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGATAAAPAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPAKAXXXPPADAAEQAKAAARNGSGXXXXXXXXXXXXXXXXXXXXGRGDGRHRKPGSGRNSRGTGGDAAAKDGHIARAEGGTPAGQALMAG 940
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match:
D7G7T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T6_ECTSI)
HSP 1 Score: 89.0 bits (219), Expect = 1.220e-14
Identity = 118/310 (38.06%), Postives = 159/310 (51.29%), Query Frame = 1
Query: 67 ASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKGEAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----PEG----EALPLMPAEVADAT----TNTAAVGTAAASVQTAPQQEPAAALSKPRGVSSA----------QQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWS-WAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQG--EFGAGVTYVQLEAMVEELCTKFSPAPAAAA 918
A+++NPY+ +SKK R L+KK EKI+KTE +ASGK L++EQ++L+ TK L+E ++ EH + A +E VAK AEK XXXXXXX XXXXXXXXXXXX PEG + P AEVA AT +T + T A VQT P PR VS A ++ A +A + A K+LRLLH S + LP V F V+ G+ PP +EADF++ + + + A Y+ + G E GV+Y L+ MV L ++ PAAAA
Sbjct: 90 ATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEERETAEKAKLLLAPXXXXXXXTGLSIAAXXXXXXXXXXXXXPAPGPEGGGPQDQQPA--AEVAVATESVGVSTDLLATEEAEVQTDVSGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIAKGRKEAATGLSKVLRLLHVASRFEAKGERLPTAVDFFSKVLLGKTMPP--DEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAAAA 395
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Match:
A0A6H5KV56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV56_9PHAE)
HSP 1 Score: 84.0 bits (206), Expect = 1.110e-12
Identity = 120/310 (38.71%), Postives = 161/310 (51.94%), Query Frame = 1
Query: 67 ASSTNPYIMVVSKKLRALRKKGEKIRKTEEQAASGKQLHDEQVELIMTKELVERSVLEHSTILAMLEEVAKG--EAAAAEAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGEAL----PLMPAEVADATTNTAAVG-------TAAASVQTAPQQEPAAALSKPRGVSSA----------QQTVAVPDAAQXXXXXXXXXXADVTRKLLRLLHAWS-WAGGAHALPVPVRLFCDVIFGRARPPPPEEADFEEIVHANTKHALRYVTQAQG--EFGAGVTYVQLEAMVEELCTKFSPAPAAAA 918
A+++NPY+ +SKK R L+KK EKI+KTE +ASGK L++EQ++L+ TK L+E ++ EH + A +E VAK E AAE K XXXXXXXXXX XXXXXXXXXXXXXXX P A+ T +VG T A VQT + P PR VS A ++ A +A + A K+LRLLHA S + LP V F V+ G+ PP +EADF++ + + + A Y+ + G E GV+Y L+ MV L ++ PAA A
Sbjct: 45 ATTSNPYLAGLSKKARGLKKKMEKIKKTEALSASGKHLNEEQLKLLETKPLLEFALSEHERVKAAMEAVAKDVEEREAAEKAKLLLAPXXXXXXXXXXGLSXXXXXXXXXXXXXXXXXXXXXXGGGPQDQQPAAEVAVETESVGVSTDPPATEEAEVQTDVKGPPPRPGLDPREVSEAVAVAATLAAQEKEKAAQEAEERGIVKGRKEAATGLSKVLRLLHAASRFEAKGQRLPTAVDFFSKVLLGKTVPP--DEADFDDCLAQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAATA 352
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348763 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 0.00e+0 / Id = 100.00 Expect = 1.22e-14 / Id = 38.06 Expect = 1.11e-12 / Id = 38.71 Sequence A0A835YXI0_9STRA D7G7T6_ECTSI A0A6H5KV56_9PHAE back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
ProteomeId Trimin1|348763|estExt_Genemark1.C_Ctg_310006 Max annot lvl 2759|Eukaryota EggNOG OGs 2CXH2@1|root,2RXF1@2759|Eukaryota Evalue 2e-15 Seed ortholog 2880.D7G7T6 Hectar predicted targeting category other localisation Ec32 ortholog description conserved unknown protein Ec32 ortholog Ec-06_000350.1 TranscriptId 349085 Track FilteredModels1 ProteinId 348763
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA
>mRNA_7352 ID=mRNA_7352|Name=jgi.p|Trimin1|348763|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2823bp|location=Sequence derived from alignment at Contig_31:36434..42376+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGCCCGCAGCAGCAGAAGGTTCCGGAGATGGCGCCAGTGTTGCCGATGG back to top protein sequence of jgi.p|Trimin1|348763
>Trimin1|348763|estExt_Genemark1.C_Ctg_310006 ID=Trimin1|348763|estExt_Genemark1.C_Ctg_310006|Name=jgi.p|Trimin1|348763|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=941bp
MPAAAEGSGDGASVADGAGLHAASSTNPYIMVVSKKLRALRKKGEKIRKT back to top mRNA from alignment at Contig_31:36434..42376+
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7352 ID=mRNA_7352|Name=jgi.p|Trimin1|348763|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5943bp|location=Sequence derived from alignment at Contig_31:36434..42376+ (Tribonema minus UTEX_B_3156 )ATGCCCGCAGCAGCAGAAGGTTCCGGAGATGGCGCCAGTGTTGCCGATGG
CGCCGGCTTGCACGCAGCCTCCAGCACCAACCCCTATATCAT GGTGGTCTCCAAGAAACTCAGGGCGCTGCGCA
AGAAGGGCGAGAAGATACGGAAGACGGAGGAGCAGGCAGCCAGTGGGAAG
CAGCTCCACGACGAGCAGGTGGAGCTCATCATGACCAAGGAGCTGGTCGA
AAG GTCGGTGCTCGAGCACTCGACGATTTTGGCAATGCTGGAGGAAGTG
GCCAAGGGGGAGGCAGCGGCGGCAGAGGCGGAAAAGGCGGCGGAAGAAGC
AGCAGCAGAGGCAGAGGCGGCGGAGCGGGCGGCAGCGACATCAACGGCAG
AAGACGAAGCCGCAGCGGAGGCAAGT GCAGCGGAGCCGGAGGGCGAGGCGCT
GCCGCTGATGCCTGCAGAAGTGGCGGATGCCACCACCAACACGGCGGCGG
TGGGGACGGCGGCGGCGAGCGTGCAGACGGCGCCGCAGCAGGAGCCCGCA
GCAGCGCTCAGCAAGCCGCGCGGCGTGTCCAGCGCGCAGCAGACGGTGGC
GGTGCCTG ACGCGGCGCAGCCCGCTGCTGCCG
CCGCCACCGCCGCCGCCGCGGACGTCACGCGCAAGCTGCTGCGCCTGCTG
CACGCGTGGAGCTGGGCGGGCGGCGCGCACGCGCTGCCGGTGCCGGTGCG
CCTCTTCTGCGACGTCATCTTCGGCCGCGCGCGCCCGCCGCCGCCGGAGG
AGGCGGACTTTGAGGAGATCGTGCACGCCAACACGAAGCACGCGCTGAG GTAC
GTCACGCAAGCGCAGGGGGAGTTCGGCGCGGGGGTCACGTACGTGCAGCT
CGAGGCCATGGTCGAGGAGCTGTGCACAAAGTTCTCGCCCGCGCCCGCCG
CCGCCGCTGCCGCTGCCGCGCCGCCGCCCCAGGCGCAGCCGGCGGCGGCC
CGTCAGCCGGAGCAGGCCTCGAAGGCGCAAGCTGCGGAGCCGCGCGCGGC
GCAGGCGAAGCCCAGCAGGCCCCCGCAGGAGCAGCCGCAGCAGCCGCCCG
TGCAGAGCAGAGCGGAGCAGCTGAGGGGGGGGCAGGAGGGGGGCGGAGGG
GGGTCCGGCGGGGCGCAGGCGGGGGGGGCTGCGCGGGTGTCGGACGGGCC
AGCACGGGCGTCAGGAGAGGCGGCGGCGCAGTCTGCGCACCGCGGCGGCA
GTGAGCACAGGGAGAGGGAACGCAGGAAGCAGGGGGAGGTGAGGGTGCCT
GCTGCGGCGGCGCCCGCACAGCCGCAGCGCACGGCTGCGCCGGCGGGTGG
CGGCGTGGTGCCGCAGCGGGCCACGGCGCCGCCATCGCCGCCGCCGCAGC
AGCGGCAGCAGCAGCAGCAGCAGGCACAGCGGCAGCGCGTCGTGCAGCAG
TTGCAGGAGCCGACGCAGCATCAGCAGCAGCTGCCACAGCAGCAGCAGCA
AGCTTTGCCGGGTGCACAACGTGCGCAGCAGCAGCAGCAGAAGCAGCCTT
CACCAGTGAAGCAGGAGCGGCTGCACCAGCCCTCGCAGGTGCCGTCGGCC
GCACAGGCAAAATCAGCTGCTCGGCCGCAGGGCGGCGCCGCTGCTGCCAA
CATGAACAGCGGTCGCCGAGATGCTGACAAAGGTGCACACGGGACGAACG
GCGTGTCTACCTCTGCCAAG GCTCCTGCGCCTCTGGCTGTACCCACTCTACAGGACCCACCCACGGCACC
AGGTTGGGCAGATGAGCCCATGGACACATGGGCAGCCCCCGCAGGTGACG
CTCCCACGCAGGGCAGAACAGCCACTGCCACAATGCAGGCTGCGGATACA
CGGCGCGCGCCTCCTGGTCGCGGCGACCGCAGAGATGGCGGCAGCAGCGG
CAGTGCCGGCGGCAGCGGCGGCGCCGGTGGCGGCGATGCGAGCGGCGGCA
GCGGCGGCGGAGACGGCGACAGTGGCGGCAGGATGAAGCGCAGTGGCAGG
GGCGGAGGCGCTCGCAAATCAAAGCAGCAGACCAGTGATGGCGTTGGCGC
TGCTGCTGCCGAGGGTGCGGCCGCGGCTGCGCTGACAGATGTGCAGCCGC
AAAAGCAGCAGCAGCAGCAGCGGCGTAAGCCTTTGCCGGCACGGCAGGCG
CCCGTGGCAGCTCCGCACGCCACAGTCCCTGCGGCTGCTGAAGCCGCTGA
ACAGACTGCTGCCGCGGCGGCACCGACAGCGATGGCAGCGACGCCCAAAC
CGCCTAGGCCTCAGCGGAAGCCGACACGGCAGCAGCAGGATGGTGCCACT
GCTGCGGCTCCAGCAGTCGGCGAGGAGAACGGCAGCGGTGGCACAGCTCC
GGCTGCTGTTGCGGCGAGCGACGGCGGCAGCGAAGGAGACAAGGCAGGGG
TGCGCAGGAACCGGCGCGGCGGCAGCGCGCGCAGAAGAGCAAAGCCTGGA
GGCGAGGAGACTGCTTCCACTGCCATGCTGGATCAACAGCGGCAAAAGCA
GGAGCGGGCACCAGCGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGC
CGAGGCGACAGCCAGCACCTGCAAAAGCCGCTGCAGCACCGCCCGCGGAT
GCCGCAGAACAGGCCAAGGCCGCAGCTCGCAATGGCAGCGGCGGCAATGG
CGGCAACGGCGGCGGCGGCAACGGCGGCGGCGGTGGCGGTGCAGGGGGGG
CAGGAAGGGGGGATGGGCGCCACAGGAAGCCTGGCAGTGGCCGCAACAGC
AGAGGCACGGGCGGCGACGCCGCGGCAAAGGATGGCCATATTGCCAGAGC
TGAGGGCGGCACTCCCGCTGGCCAGGCGCTGATGGCGGGGTAG back to top Coding sequence (CDS) from alignment at Contig_31:36434..42376+
>mRNA_7352 ID=mRNA_7352|Name=jgi.p|Trimin1|348763|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2823bp|location=Sequence derived from alignment at Contig_31:36434..42376+ (Tribonema minus UTEX_B_3156 ) back to top