Trimin1|164454|e_gw1.31.83.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|164454
Unique NameTrimin1|164454|e_gw1.31.83.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length83
Homology
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 6.930e-59
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MCPVIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPYQVWRVVD 82
            MCPVIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPYQVWRVVD
Sbjct:    1 MCPVIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPYQVWRVVD 82          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.540e-21
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    4 VIEANRKTELCRNWQNGTCLYGG-KCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75
            ++  NRKTE+CRNWQ G C+    KCAFAHG  EL  Q+L +ME  GRIPNA++FR  PC+  TW+ TG+CPY
Sbjct:    8 LVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCL--TWITTGACPY 78          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.390e-20
Identity = 38/72 (52.78%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    4 VIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75
            +IE NRKTELCRN++NG+C +G +CAFAHG  ++  +TL ++EK GRI +A+++++  C+  TWVATG+C Y
Sbjct:   33 IIEHNRKTELCRNYENGSCTFGDRCAFAHGLDDIKHKTLRDLEKEGRIADASKYQA--CLCQTWVATGTCLY 102          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A6A4HWA4_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4HWA4_9AGAR)

HSP 1 Score: 55.5 bits (132), Expect = 4.620e-8
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    3 PVIEANRKTELCRNWQ-NGTCLYGGKCAFAHGQSELTVQT 41
            PV+   RKTELC NW+  G+C YG KC FAHG+ EL + T
Sbjct:   23 PVLPGKRKTELCVNWEYRGSCRYGAKCQFAHGEEELRMAT 62          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A0G4FHV2_VITBC (C3H1-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FHV2_VITBC)

HSP 1 Score: 56.6 bits (135), Expect = 1.950e-7
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    7 ANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEME 46
            A  KTELCRNW++GTC +G +CAFAHG+ EL  +T+   E
Sbjct:  153 AKFKTELCRNWKDGTCAHGDQCAFAHGEDELRDKTVITKE 192          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A0D7AIC5_9AGAR (Uncharacterized protein (Fragment) n=2 Tax=Agaricomycetes TaxID=155619 RepID=A0A0D7AIC5_9AGAR)

HSP 1 Score: 52.4 bits (124), Expect = 2.760e-7
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query:   10 KTELCRNWQN-GTCLYGGKCAFAHGQSEL-TVQ 40
            KTELCR+W+  GTC YGGKC FAHG+ EL TVQ
Sbjct:    2 KTELCRSWEEKGTCRYGGKCQFAHGEEELRTVQ 34          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A1R2AU08_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AU08_9CILI)

HSP 1 Score: 53.1 bits (126), Expect = 6.450e-7
Identity = 25/61 (40.98%), Postives = 34/61 (55.74%), Query Frame = 0
Query:    6 EANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMAST 66
            E   KTE+CRNW+ G+C YG KC FAHGQ EL  +      K  +  N   F+   C++ +
Sbjct:   30 ETRFKTEMCRNWEAGSCEYGEKCFFAHGQKELRDKNGVRTMKDQKCENY--FKLGYCLSGS 88          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: D7G0T5_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T5_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 6.680e-7
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    4 VIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQT 41
            +IEANRKT +C++W  G C +G +CAFAHG  EL   T
Sbjct:   30 IIEANRKTAICKHWLQGVCPFGARCAFAHGAKELRNAT 67          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A367J7U0_RHIST (Uncharacterized protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J7U0_RHIST)

HSP 1 Score: 51.6 bits (122), Expect = 1.660e-6
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 0
Query:   10 KTELCRNWQN-GTCLYGGKCAFAHGQSEL 37
            KTE+CRNWQ  GTC YG KC FAHGQ EL
Sbjct:   10 KTEMCRNWQEIGTCRYGHKCRFAHGQEEL 38          
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Match: A0A7S3ILZ4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3ILZ4_9SPIT)

HSP 1 Score: 50.1 bits (118), Expect = 6.460e-6
Identity = 20/29 (68.97%), Postives = 26/29 (89.66%), Query Frame = 0
Query:   10 KTELCRNW-QNGTCLYGGKCAFAHGQSEL 37
            KTELC++W ++GTC YG KCAFAHG++EL
Sbjct:   23 KTELCKSWMESGTCKYGDKCAFAHGEAEL 51          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164454 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEW5_9STRA6.930e-59100.00C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
D8LHE0_ECTSI1.540e-2157.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIR3_ECTSI1.390e-2052.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A4HWA4_9AGAR4.620e-857.50Uncharacterized protein n=1 Tax=Gymnopus androsace... [more]
A0A0G4FHV2_VITBC1.950e-757.50C3H1-type domain-containing protein n=1 Tax=Vitrel... [more]
A0A0D7AIC5_9AGAR2.760e-772.73Uncharacterized protein (Fragment) n=2 Tax=Agarico... [more]
A0A1R2AU08_9CILI6.450e-740.98Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
D7G0T5_ECTSI6.680e-755.26C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A367J7U0_RHIST1.660e-675.86Uncharacterized protein n=1 Tax=Rhizopus stolonife... [more]
A0A7S3ILZ4_9SPIT6.460e-668.97Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 8..34
e-value: 1.3E-8
score: 44.6
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 10..34
e-value: 6.6E-9
score: 35.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 8..35
score: 15.985507
NoneNo IPR availableGENE3D4.10.1000.10coord: 5..39
e-value: 5.8E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR12547:SF140PROTEIN TIS11coord: 10..76
IPR045877RNA-binding protein ZFP36-likePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 10..76
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 8..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:1051024..1052555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|164454mRNA_7455Tribonema minus UTEX_B_3156 mRNAContig_31 1051024..1052555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|164454|e_gw1.31.83.1 ID=Trimin1|164454|e_gw1.31.83.1|Name=jgi.p|Trimin1|164454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=83bp
MCPVIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGR
IPNAARFRSNPCMASTWVATGSCPYQVWRVVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR045877ZFP36-like
IPR036855Znf_CCCH_sf