Trimin1|149934|gw1.31.161.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|149934
Unique NameTrimin1|149934|gw1.31.161.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length123
Homology
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: A0A836CG50_9STRA (PWI domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG50_9STRA)

HSP 1 Score: 237 bits (605), Expect = 4.110e-79
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query:    1 DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEMLAQQA 123
            DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEMLAQQA
Sbjct:    1 DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEMLAQQA 123          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: D8LK57_ECTSI (PWI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK57_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 3.220e-39
Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEML 119
            KK+ +   FSK LE KV+MKKVN+ VM +WI  +IT LLG+EDDIV+GT IN+L   ++  +LDP+KLQLQLTGFLEK+T  FMEELW LL DAQ+  GGIP+AFL+ KK+E+L
Sbjct:   22 KKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCINYL---SEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELL 132          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: A0A6H5KM37_9PHAE (PWI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM37_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.220e-38
Identity = 70/114 (61.40%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEML 119
            KK+ +   FSK LE KV+MKKVN+ VM +WI  +IT LLG+EDDIV+GT +N+L   ++  +LDP+KLQLQLTGFLEK+T  FMEELW LL DAQ+  GGIP+AFL+ KK+E+L
Sbjct:   22 KKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCVNYL---SEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELL 132          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: F0YH42_AURAN (PWI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH42_AURAN)

HSP 1 Score: 121 bits (304), Expect = 5.070e-33
Identity = 60/128 (46.88%), Postives = 90/128 (70.31%), Query Frame = 0
Query:    1 DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADS-----ARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEMLAQQA 123
            DK L+KK+  A  F  +L+ K++++KVN+ VM +W+  ++T+LLG+EDD+V+    N L  + D+      R+DP++LQ+QLTGFL++   PF+ ELW LL DAQ  P GIP AF+E+KK E+L +QA
Sbjct:   12 DKKLIKKLTAAGKFDASLDQKLNIEKVNVEVMVRWVNERLTELLGFEDDVVVNLVENMLTQTQDAFSGQVKRVDPKQLQIQLTGFLDRQAAPFVAELWKLLLDAQDAPHGIPRAFVERKKAELLKRQA 139          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: W2Q1D2_PHYPN (PWI domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q1D2_PHYPN)

HSP 1 Score: 125 bits (313), Expect = 1.880e-32
Identity = 65/113 (57.52%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEM 118
            KK+     F K  E  VDM+KV   V+++WIT +ITQLLG+EDDIV+  AIN LE   D  +LDP+KLQ+ LTGFLEK   PFMEELW LL  AQ+ P GIP+A L++KK+EM
Sbjct:   19 KKLLATMTFPKCFEQSVDMRKVQREVINQWITERITQLLGFEDDIVVSMAINLLETKVDE-KLDPKKLQVALTGFLEKQAGPFMEELWQLLLSAQSNPTGIPSAILDKKKQEM 130          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: G4Z4X6_PHYSP (PWI domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z4X6_PHYSP)

HSP 1 Score: 120 bits (301), Expect = 5.150e-32
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEM 118
            KK+  A  F K  + +VDM+KV   V+++W+T ++TQLLG+EDDIV+  AIN LE   D  RLDPR+LQ+ LTGFLEK    F EELW LL  AQ+ P GIP+A L++KK+EM
Sbjct:   19 KKLLAAMSFPKCFDQRVDMRKVQREVVNQWVTERLTQLLGFEDDIVVSMAINLLEPKVDE-RLDPRQLQVALTGFLEKQAGQFTEELWTLLLSAQSNPTGIPSAILDRKKQEM 130          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: A0A8J5IK03_9STRA (PWI domain-containing protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IK03_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.770e-32
Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEM 118
            KK+     F K  E +VDM+KV   V+++WIT +ITQLLG+EDDIV+  AIN LE   D  +LDP+KLQ+ LTGFLEK    F EELW LL  AQ+ P GIP+A L++KK+EM
Sbjct:   19 KKLLATMTFPKCYEQRVDMRKVQREVINQWITERITQLLGFEDDIVVSMAINLLELKVDE-KLDPKKLQVALTGFLEKQAGAFTEELWQLLLSAQSNPTGIPSAILDKKKQEM 130          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: A0A7S2SU80_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU80_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.090e-32
Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 0
Query:    1 DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEMLAQQA 123
            +K LMKKM     F+  L  KVD  KVNLPVM++WIT ++TQLLG+ED+IVIG  INFLEA+   A   P++LQL +TGFLEK    F+EELW LLA AQ    GIP  F+E+KKEE+   Q+
Sbjct:   21 NKRLMKKMK----FAAVLGTKVDTGKVNLPVMNRWITERLTQLLGFEDEIVIGLVINFLEANKHPA---PKQLQLDVTGFLEKKAGQFVEELWTLLAAAQENKNGIPPQFIEKKKEELAVAQS 136          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: A0A6V2SV36_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2SV36_EMIHU)

HSP 1 Score: 121 bits (303), Expect = 3.860e-31
Identity = 65/114 (57.02%), Postives = 80/114 (70.18%), Query Frame = 0
Query:    5 MKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEM 118
            MKKM K+  F    E KVDMKKVNL VM  WIT ++++ LG+ED++VIG   + L  + D AR+DP+K+QL LTGFLE  T PFM ELWALL  AQ    GIP  FLE+KKEE+
Sbjct:   21 MKKMIKSTKFPAHFETKVDMKKVNLDVMLPWITEQVSEYLGFEDEVVIGYVESQLRET-DGARVDPKKMQLSLTGFLEANTPPFMRELWALLVSAQENEHGIPTKFLEKKKEEL 133          
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Match: D0NAL8_PHYIT (Serine/arginine repetitive matrix protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NAL8_PHYIT)

HSP 1 Score: 119 bits (299), Expect = 5.250e-31
Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEM 118
            KK+  A  F K  E  VDM+KV   V+++WIT ++TQLLG+EDDIV+  AIN LE   D  +LDP+ LQ+ LTGFLEK    F+EELW LL  AQ+ P GIP+A L++KK+EM
Sbjct:   19 KKLLAAMTFPKCFERSVDMRKVQREVINQWITERVTQLLGFEDDIVVSMAINLLETKVDE-KLDPKNLQVALTGFLEKQAGSFVEELWQLLLSAQSNPTGIPSAILDKKKQEM 130          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149934 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG50_9STRA4.110e-79100.00PWI domain-containing protein (Fragment) n=1 Tax=T... [more]
D8LK57_ECTSI3.220e-3962.28PWI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KM37_9PHAE1.220e-3861.40PWI domain-containing protein n=1 Tax=Ectocarpus s... [more]
F0YH42_AURAN5.070e-3346.88PWI domain-containing protein (Fragment) n=1 Tax=A... [more]
W2Q1D2_PHYPN1.880e-3257.52PWI domain-containing protein n=6 Tax=Phytophthora... [more]
G4Z4X6_PHYSP5.150e-3254.87PWI domain-containing protein n=1 Tax=Phytophthora... [more]
A0A8J5IK03_9STRA5.770e-3255.75PWI domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A7S2SU80_9STRA8.090e-3256.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2SV36_EMIHU3.860e-3157.02Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
D0NAL8_PHYIT5.250e-3154.87Serine/arginine repetitive matrix protein, putativ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..123
NoneNo IPR availableGENE3D1.20.1390.10PWI domaincoord: 16..113
e-value: 1.1E-31
score: 110.9
NoneNo IPR availablePANTHERPTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINcoord: 6..123
NoneNo IPR availablePANTHERPTHR23148:SF0SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1coord: 6..123
IPR002483PWI domainSMARTSM00311pwi_2coord: 24..102
e-value: 7.8E-15
score: 65.3
IPR002483PWI domainPFAMPF01480PWIcoord: 31..101
e-value: 1.7E-24
score: 85.9
IPR002483PWI domainPROSITEPS51025PWIcoord: 11..113
score: 29.170689
IPR036483PWI domain superfamilySUPERFAMILY101233PWI domaincoord: 13..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:513065..514381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149934mRNA_7395Tribonema minus UTEX_B_3156 mRNAContig_31 513065..514381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|149934|gw1.31.161.1 ID=Trimin1|149934|gw1.31.161.1|Name=jgi.p|Trimin1|149934|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=123bp
DKALMKKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDI
VIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQ
ACPGGIPAAFLEQKKEEMLAQQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002483PWI_dom
IPR036483PWI_dom_sf