Trimin1|133014|gw1.31.20.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133014
Unique NameTrimin1|133014|gw1.31.20.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length99
Homology
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A836CEC6_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEC6_9STRA)

HSP 1 Score: 195 bits (495), Expect = 4.250e-63
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99
            MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE
Sbjct:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.560e-29
Identity = 54/98 (55.10%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWD 98
            MFERL++SILT +LGEYVE S+F+ E+++LG+W G LVLE+M +K +++D  +LPL LRHG IGRL+++IP + L  DPI+  ++ V++VV PK+EWD
Sbjct:    1 MFERLVSSILTRLLGEYVEDSTFNTESVKLGIWRGYLVLEDMHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRVFLVVEPKFEWD 98          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A482SWM9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWM9_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 2.740e-22
Identity = 45/97 (46.39%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEW 97
            MFE+ L+ IL  +L ++VE      E +++GVWSG +VLEN+ LK S+ +  ++P+ L +G IGRLEL IP +RLG +P+   L+ +Y++V PKYEW
Sbjct:    1 MFEQGLSFILKKLLRDFVEDGDNLHEKVQVGVWSGLIVLENLVLKNSIFNLLEVPVALSYGYIGRLELHIPWSRLGYEPVTVVLDKIYILVEPKYEW 97          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A151Z548_9MYCE (Vacuolar protein sorting-associated protein 13 family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z548_9MYCE)

HSP 1 Score: 95.9 bits (237), Expect = 6.000e-21
Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYE--WDE 99
            MFERL+A +LT  LGEY+++   + E +++G+WSGN+ LEN+ LK   L+   LP  ++ G +G+L LKIP   L T+P++  +E++Y+V  PK E  WDE
Sbjct:    1 MFERLVADLLTRYLGEYIKT--LNTENLKIGIWSGNVSLENLELKKRALEKFNLPFTIKEGFLGKLSLKIPWNNLKTEPVIVIVENLYIVASPKSENIWDE 99          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A4D9D6R4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6R4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.750e-20
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99
            +  ++L  +LT VLG+Y++   F ++T+R+G+W G++ L N+  K  VLDP  LPL LR GRIG +E++IP  +LG   ++  LE V+V+   KY+W++
Sbjct:    2 VLSQILTPLLTKVLGDYLKPECFQEDTLRVGLWRGHVELFNVFFKEDVLDPLGLPLTLRFGRIGHMEVQIPWNQLGRKAMIVKLEQVHVLAYAKYQWED 100          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: T1HV00_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HV00_RHOPR)

HSP 1 Score: 93.6 bits (231), Expect = 3.750e-20
Identity = 44/96 (45.83%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYE 96
            +FE L+  +L   LGEYVE+   SQ  +++G+W G++VLEN+ LK S LD   LP++  +GR+G+L LKIP  RL TDP++A+++ +Y++VVP  +
Sbjct:    2 VFESLVTDLLNKYLGEYVENLDSSQ--LKVGIWGGDVVLENLILKQSALDELDLPVKTLYGRLGKLTLKIPWKRLYTDPVIASVDTLYLLVVPNQD 95          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A8J4PSJ7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PSJ7_9MYCE)

HSP 1 Score: 93.6 bits (231), Expect = 3.890e-20
Identity = 42/101 (41.58%), Postives = 68/101 (67.33%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYE--WDE 99
            MFER +A +LT  LGEY+++   + E +++G+WSGN+ LEN+ LK + L+   LP  ++ G +G+L LKIP   L T+P++  ++++Y+  VPK    WDE
Sbjct:    1 MFERFVADLLTRYLGEYIKT--LNTENLKIGIWSGNVSLENLELKKNALEKFNLPFTIKEGFLGKLSLKIPWNNLKTEPVIVVIDNLYITAVPKSSNLWDE 99          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: W7U785_9STRA (Vacuolar protein sorting-associated protein vps13 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U785_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.250e-20
Identity = 41/99 (41.41%), Postives = 67/99 (67.68%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99
            +  ++L  +LT VLG+Y++   F ++T+R+G+W G++ L N+ LK  VLD   LPL LR GRIG +E++IP  +LG   ++  LE V+V+   KY+W++
Sbjct:    2 VLSQILTPLLTKVLGDYLKPECFQEDTLRVGLWRGHVELFNVYLKEDVLDTLGLPLTLRFGRIGHVEVQIPWNQLGRKAVIVKLEQVHVLAYAKYQWED 100          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: UPI0009B344CB (vacuolar protein sorting-associated protein 13C-like n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0009B344CB)

HSP 1 Score: 84.0 bits (206), Expect = 3.920e-19
Identity = 40/93 (43.01%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVP 93
            +FE L++ +L   +G+YVE+   SQ  +++G+W GN+VLEN+ +K + L    +P +++ G+IG+L LKIP   L  D +VATLE +Y++VVP
Sbjct:    2 VFESLVSDLLNRFIGDYVENLDKSQ--LKIGIWGGNVVLENLKVKENALSEFNVPFKVKAGQIGKLTLKIPWKNLYNDAVVATLEGLYLLVVP 92          
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Match: A0A069DYI3_9HEMI (Putative vacuolar protein n=2 Tax=Panstrongylus TaxID=65342 RepID=A0A069DYI3_9HEMI)

HSP 1 Score: 89.4 bits (220), Expect = 1.190e-18
Identity = 42/96 (43.75%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYE 96
            +FE L+  +L   LGEYVE+   SQ  +++G+W G++VLE++ LK S LD   LP++   GR+G+L LKIP  RL TDP++A+++ +Y++ VP  +
Sbjct:    2 VFESLVTDLLNKYLGEYVENLDSSQ--LKVGIWGGDVVLEDLVLKQSALDELDLPVKTLFGRLGKLTLKIPWKRLYTDPVIASVDTLYLLAVPNQD 95          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133014 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEC6_9STRA4.250e-63100.00Vacuolar protein sorting-associated protein 13A N-... [more]
D8LP20_ECTSI2.560e-2955.10Vacuolar protein sorting-associated protein, putat... [more]
A0A482SWM9_9ARCH2.740e-2246.39Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A151Z548_9MYCE6.000e-2144.55Vacuolar protein sorting-associated protein 13 fam... [more]
A0A4D9D6R4_9STRA2.750e-2041.41Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
T1HV00_RHOPR3.750e-2045.83Uncharacterized protein n=1 Tax=Rhodnius prolixus ... [more]
A0A8J4PSJ7_9MYCE3.890e-2041.58Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
W7U785_9STRA7.250e-2041.41Vacuolar protein sorting-associated protein vps13 ... [more]
UPI0009B344CB3.920e-1943.01vacuolar protein sorting-associated protein 13C-li... [more]
A0A069DYI3_9HEMI1.190e-1843.75Putative vacuolar protein n=2 Tax=Panstrongylus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13-like, N-terminal domainPFAMPF12624Chorein_Ncoord: 2..96
e-value: 9.7E-28
score: 96.6
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 1..95
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_31contigContig_31:314573..315476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133014mRNA_7378Tribonema minus UTEX_B_3156 mRNAContig_31 314573..315476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133014|gw1.31.20.1 ID=Trimin1|133014|gw1.31.20.1|Name=jgi.p|Trimin1|133014|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=99bp
MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLD
PAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13-like_N
IPR026847VPS13