mRNA_18775 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA) HSP 1 Score: 1627 bits (4213), Expect = 0.000e+0 Identity = 858/986 (87.02%), Postives = 878/986 (89.05%), Query Frame = 3
Query: 111 SFPIKLITSSQPH-----FFCCPHSKAGMDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXXXPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPF--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGATTG-----------------GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 2966
S+PI + H FF P ++ MDIDDFDLRAAENGFI DEEPPE XXXXX PSPKRNTSYARQK+QQY PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVP+ NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFG G GDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA AXXXXXXXXXXXXXXXXXEL L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR G +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct: 24 SYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPR---PSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA) HSP 1 Score: 691 bits (1782), Expect = 1.080e-240 Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 3
Query: 1821 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 2888
KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSAR+GKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct: 1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.350e-49 Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 3
Query: 1839 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 2960
VRD+ F LLD +KD+ S +GVV+L TATLRPRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A S KG++ LL VL ++Y AP+S + AGAASS M AL G R+ +DE+P D Q + ++GGA I REL+ Q SF N N ++ A L+RI P D + + D + H + + K++ +L AK+WYE GLG P CC DN + WI + CE+G EG L +S +N++ A + P I +M +GF R +Q K GLK AG
Sbjct: 11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANS-KGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM) HSP 1 Score: 109 bits (272), Expect = 7.810e-21 Identity = 116/451 (25.72%), Postives = 181/451 (40.13%), Query Frame = 3
Query: 1479 ETEEDLLFGATTGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAXXXXXXXXXXXXXXXXXELTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 2780
+ DLL G G RF +K LW Y +I +L A A + LQ + L A A LE ++ L + ++GT+KR +L V + LD + + NG V+L T LRP R D+LT V I Y NA +P T L++ + R +GYS+TG VRE++++ G + +GK + ++L+++LG + QA L A K + + G R++ E G + ++K ++GG I R + F+PT W +TN P IK + AI +RI +IP + KF G+ + D + L + W GLG+ A + A + + D L +WI + C +G R A A + S
Sbjct: 82 DANADLLLGL----HGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B) HSP 1 Score: 108 bits (271), Expect = 1.620e-20 Identity = 97/302 (32.12%), Postives = 142/302 (47.02%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 2765
LD N + NGVV+L T L P R DML TR DY+ + P +Q L ++ A + + R LGY++TG EEIIVF +G A +GK I +++ +++G AP S L + G M L GAR+V ++ELPAG+ +D Q +K ++G IS REL+ +F P W TN PIIK + I +RI ++P KF K K +N LR + A+++ G + +D+D L ++ D C + ADPA
Sbjct: 450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM) HSP 1 Score: 105 bits (262), Expect = 2.090e-19 Identity = 83/315 (26.35%), Postives = 144/315 (45.71%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 2786
LD + + + +NG ++L+ TLR R D+LT I Y D+ P + L+++ + L+ + R +GYS+TG VRE++++ G + +GK + ++++++LG + QA L A + + + G R+V E G + ++K ++GG I+ R +F +F PT W +TN P I+ + AI +RI +IP + KF PG+ + D KL + +P W G + P K A + + D L +W+ D C + A A + S A
Sbjct: 444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6) HSP 1 Score: 105 bits (261), Expect = 2.530e-19 Identity = 79/301 (26.25%), Postives = 152/301 (50.50%), Query Frame = 3
Query: 1839 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 2726
V D +F++ +I + +G+V+L++ +++P +D++T++ N + + P + + DI + P L+E + +++GY+ITG V E++ VFLLG+ + +GK ++ +L+Q+LG +T K ++ + + + +A +GAR++ E+ G L M+K ++GG I+ + L+ SF+PT W ++N PII + I +R+ IP AK K P+ DK K + + A ++ G+ + P D + D D + ++IND
Sbjct: 429 VDDSEFDR----KTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT) HSP 1 Score: 103 bits (258), Expect = 2.640e-19 Identity = 102/374 (27.27%), Postives = 168/374 (44.92%), Query Frame = 3
Query: 1866 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 2963
LD + NGVV+L L P +TR D++ S + P ++ L + ++ LL LGY++TG+ EEI++F +G A +GK I +++ +LG AP L + + G + M L GAR+V ++ELPAG+ LD Q++K ++G IS R L ++ P PW TN PI+K + I +RI I+P F +++ ++ LRE + A+R+ GL PA K + D+D L ++ EC A A + + F + N+ ++ + P K+ +++ +GF D N K Y GL+++GG
Sbjct: 195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6) HSP 1 Score: 104 bits (260), Expect = 3.370e-19 Identity = 89/319 (27.90%), Postives = 146/319 (45.77%), Query Frame = 3
Query: 1869 DVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2816
D + + NGVV+L T R +DM+T + ++ + R P+ L + AP+R+ L R LR +LGYS+TG ++E+ F+LGR + +GKG + ++ V+G + Q SFL +A + +MAL+ R++ E +D K ++GG +SGR +G SF P +TNEMP E A+ +R+ +IP KF A D +DK + L + A + + G + A + A D+++ WI+ EC+ + I AF Y+ + R
Sbjct: 449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A1Y1IMX7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMX7_KLENI) HSP 1 Score: 103 bits (257), Expect = 8.880e-19 Identity = 100/371 (26.95%), Postives = 161/371 (43.40%), Query Frame = 3
Query: 1785 SIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRI-LGYSITGHVREEIIVFLLGRSARSGKGIIESLLQQVLGCMFYQAPQSFLTACKAV---SAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMP-IIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAK--------------RWYEGG--------LGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2816
++ + A L V S + D + KL+D + D C NGV++L T L + TR+ + Y S + D+ N + R L++ LGY++TGH EEI G + +GK ++ LQ+ G Y P S KA + GAASSH++AL+GAR+ DE +++ IK ++GG ++ RELF SF PT TN P I A+ +L+R+ ++P FR D ND ++T L+ L +++ WY L PA A D + + D ++ ++ + C++G A A +L ++ +AR
Sbjct: 502 NVNSPKEARACLDYVTSVLYDPEMIKLMDCDIDSVGCPNGVLDLRTGILSFAHPSQLCTRSTGVRYMGLSHNTDRFDAFVMDL-------FNSDESIVRWLQLFLGYALTGHTSEEIFCIWYGAGS-NGKSALKMALQKAFGS--YYTPMSKDCIIKAGGKRAEGAASSHLVALKGARLALCDESEESQVINSACIKEMTGGGAVTCRELFQKCESFVPTHANVLLTNHKPSIADADGGLLRRVSLLP----FRNSYKVAEEVDPNDPHSKPQSTHLKTWLESSEGAEECLVWVVRGSVEWYARQSANPAAKVLAPLPAPMAAAFDEYLREFDDMRMFLKEFCDIGPTFVAPSADLLARFNAEMNSDLKAR 858
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A835Z7M0_9STRA (PRA1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M0_9STRA) HSP 1 Score: 395 bits (1015), Expect = 1.320e-137 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
Query: 70 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR 765
MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR
Sbjct: 1 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAGAGLGSLLSGXXXXXXXXXXXXXXAGLRRGSGQGARR 232
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: D8LEX3_ECTSI (PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX3_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.600e-31 Identity = 85/205 (41.46%), Postives = 114/205 (55.61%), Query Frame = 1
Query: 70 MAELRRRFQAEAAGARQSPGTADPGSGIMGELQSIA----SEL--------QSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 648
M E + R + +G+R G+A P + + Q++A SEL + L + M+ WGEFF +FK PRAW +VLDER+TTN LHYRGNY V G ++V I+S+P +LL LL FLFPT RAV V R + ER A++ +L TGA LL+ G CL H VFRPR++ SK +R EA+A
Sbjct: 1 MPEPQLRRRPVGSGSR---GSAPPRPNVANQNQAVALAVLSELGAMMELFFKGLRLKEMKGWGEFFARFKAPRAWNTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQA 202
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S2SJN4_9STRA (PRA1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJN4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.380e-20 Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 163 LQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARANAG 657
LQ + +LQ+L +RPWGEFF FKPP+ WT++ +++R+ TN LHYR NY V+ +L SSP LL+ + L V+L + +++ GR ++ + +L G LL LA H VFR RNLKSKFNR+ +E + G
Sbjct: 40 LQVLRQQLQALGLNEVRPWGEFFSHFKPPKQWTQDEVEKRVVTNFLHYRTNYLLVLGTILLAMFFSSPMLLITICLVVLLWVYLMLVKKGP--LLIEGRRFDEGQKAIGCGCASILILLMAGQLIKLLGTLSLAVILICLHMVFRQRNLKSKFNRISDEIKLRGG 202
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A482SWI0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWI0_9ARCH) HSP 1 Score: 81.6 bits (200), Expect = 5.850e-15 Identity = 47/165 (28.48%), Postives = 89/165 (53.94%), Query Frame = 1
Query: 151 IMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEAR 645
++ L+ + ++Q L W+ M+PW EFF FKPP+ ++ L++RITTN LHYR NY + G +++ I+++P ++L + A + ++ + + ++ + ++++ L +L TG L + C H + RPR++ SK NR+ EE +
Sbjct: 14 LLDALKLVGEKIQVLGWKEMKPWSEFFATFKPPQFDSRH-LEQRITTNFLHYRSNYLAISLGILILQILTNPVIILSSVAIFGICTYVL--QVHRKPFIIGDFSFDGVGKQYLCAGLSAIILFATGTVVKLCWCLFYIILVCGIHMLLRPRSVSSKANRMYEEMK 175
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S2U321_9EUKA (PRA1 family protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U321_9EUKA) HSP 1 Score: 76.6 bits (187), Expect = 1.710e-13 Identity = 57/169 (33.73%), Postives = 87/169 (51.48%), Query Frame = 1
Query: 139 PGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLL-VAAASLALLVFL-FPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEE 639
P S + ++ ++ L L W + RPW EF FK P L+ERI TN L++RGNYC++V + ++ + +P +L V + +LVFL ETS G ++ + + + L LL + GA + Y L T LAH VFR R +KS+ N++ EE
Sbjct: 22 PSSALQQFIEELSEVLSRLGWSDARPWEEFGRDFKKPTH-----LEERIWTNFLYFRGNYCYIVAATTILALFFNPTCMLAVMFCVVGMLVFLGVKVETS------PGHPMTFEMKFLAGLPVCLLLLMSAGALFWMSYGILLGMCTSLAHMVFRTRTIKSRINKVYEE 179
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A6V3PRX0_9EUKA (PRA1 family protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3PRX0_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 3.820e-12 Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 1
Query: 136 DPGSGIMGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASL-ALLVFL-FPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEE 639
D S + + ++ + L W R W EF +F P L+ER+ TN L+YRGNYC++V + L+ + +P+ +L A + +++FL ETS G ++S + + L +LA+ GA + Y L T AH VFR R LKS++N+L EE
Sbjct: 28 DEQSALQQFITEVSDVFERLGWSEARSWSEFGREFNKPSE-----LEERLWTNFLYYRGNYCYIVVATTLLALFLNPSSMLAAMFCVFGMIIFLGVKVETS------PGESMSYEMKLLAGTPVCLLVLASAGALFWMSYGLLLGMLTSFAHMVFRTRTLKSRWNKLVEE 186
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Match: A0A7S4A4L6_9STRA (PRA1 family protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4L6_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.830e-6 Identity = 57/172 (33.14%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 154 MGELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYC----FVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGR---AVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNRLQEEARA 648
+ ELQ L + RPWGEFFEQFKP T LD R+ TN LHY+ NY VV +L + S AL + A AS A + T GR +++ G ++ R A V L G + A +AH RPR+L +++N +E RA
Sbjct: 11 LAELQDTWRRFD-LHYAGARPWGEFFEQFKP----TARDLDTRMATNWLHYKANYAQLTTLVVALGLLWWPTSLFALCVAAIASTASV-----TACPGRRILMIGSYSVKLTTKNRALAAAVAAPLTLIFFGVLTWIALVFSFALVLPVAHMALRPRSLSARYNAASDEVRA 172 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354631 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|354631 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2969bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAGback to top protein sequence of jgi.p|Trimin1|354631 >Trimin1|354631|estExt_Genemark1.C_Ctg_3010004 ID=Trimin1|354631|estExt_Genemark1.C_Ctg_3010004|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=930bp MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPARPSPKback to top mRNA from alignment at Contig_301:30123..33160- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3038bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_301:30123..33160- >mRNA_18775 ID=mRNA_18775|Name=jgi.p|Trimin1|354631|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2790bp|location=Sequence derived from alignment at Contig_301:30123..33160- (Tribonema minus UTEX_B_3156 )back to top |