Trimin1|348756|estExt_Genemark1.C_Ctg_300124 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348756
Unique Name	Trimin1\|348756\|estExt_Genemark1.C_Ctg_300124
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	212

Homology

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BLAST of jgi.p|Trimin1|348756 vs. uniprot
Match: A0A836CEK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK9_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 1.120e-144
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query:    1 MAAILGDDDSSRFHEEQLLDELVPANVNRIYSSKLFRVQVVAPAKCVKARVSTTVTVAPPDIDIGTVVLGVNGERYAICEAHPGRIFRTANGSDLAWEEVPGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMRALLQGNYTPAPRVQESARRSATPSTGNAAAPSSAVIDNWYAVAAPDGDVSAYCRIAQAQVRQLLAPSSSAGPPRSI 211
            MAAILGDDDSSRFHEEQLLDELVPANVNRIYSSKLFRVQVVAPAKCVKARVSTTVTVAPPDIDIGTVVLGVNGERYAICEAHPGRIFRTANGSDLAWEEVPGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMRALLQGNYTPAPRVQESARRSATPSTGNAAAPSSAVIDNWYAVAAPDGDVSAYCRIAQAQVRQLLAPSSSAGPPRSI
Sbjct:    1 MAAILGDDDSSRFHEEQLLDELVPANVNRIYSSKLFRVQVVAPAKCVKARVSTTVTVAPPDIDIGTVVLGVNGERYAICEAHPGRIFRTANGSDLAWEEVPGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMRALLQGNYTPAPRVQESARRSATPSTGNAAAPSSAVIDNWYAVAAPDGDVSAYCRIAQAQVRQLLAPSSSAGPPRSI 211

[Close]

BLAST of jgi.p|Trimin1|348756 vs. uniprot
Match: A0A835YZ84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ84_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.340e-73
Identity = 127/164 (77.44%), Postives = 128/164 (78.05%), Query Frame = 0

Query:    3 AILGDDDSSRFHEEQLLDELVPANVNRIYSSKLFRVQVVAPAKCVKARVSTTVTVAPPDIDIGTVVLGVNGERYAI-------------------------------CEAHPGRIFRTANGSDLAWEEVPGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMR 135
            A  GDDDSSRFHE QLLDELVPANV+RIYSSKLFRVQVVAPAKCVKARVSTTVTV PPDIDIGTVVLGVNGERYAI                               CEAHPGRIFRTANGSDLAWEEV GCKTDISAGIATAEVRRFSSYAYGINLEEHKGMR
Sbjct:   45 AFFGDDDSSRFHEAQLLDELVPANVDRIYSSKLFRVQVVAPAKCVKARVSTTVTVTPPDIDIGTVVLGVNGERYAIWSAVVHSKLQARINIWGFMLRLEFAICTCSHCEAHPGRIFRTANGSDLAWEEVTGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMR 208

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348756 vs. uniprot

BLAST of jgi.p|Trimin1|348756 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CEK9_9STRA	1.120e-144	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YZ84_9STRA	1.340e-73	77.44	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_30	contig	Contig_30:870973..875607 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348756	mRNA_5425	Tribonema minus UTEX_B_3156	mRNA	Contig_30 870973..875607 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348756|estExt_Genemark1.C_Ctg_300124 ID=Trimin1|348756|estExt_Genemark1.C_Ctg_300124|Name=jgi.p|Trimin1|348756|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=212bp
MAAILGDDDSSRFHEEQLLDELVPANVNRIYSSKLFRVQVVAPAKCVKAR
VSTTVTVAPPDIDIGTVVLGVNGERYAICEAHPGRIFRTANGSDLAWEEV
PGCKTDISAGIATAEVRRFSSYAYGINLEEHKGMRALLQGNYTPAPRVQE
SARRSATPSTGNAAAPSSAVIDNWYAVAAPDGDVSAYCRIAQAQVRQLLA
PSSSAGPPRSI*