Trimin1|348733|estExt_Genemark1.C_Ctg_300083 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348733
Unique Name	Trimin1\|348733\|estExt_Genemark1.C_Ctg_300083
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	416

Homology

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BLAST of jgi.p|Trimin1|348733 vs. uniprot
Match: A0A835Z441_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z441_9STRA)

HSP 1 Score: 592 bits (1526), Expect = 7.760e-210
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0

Query:    1 MSGRKAVEAAVPAACAAIRNRILGPALDQLSDSAYDDVTPPHSSPSDGSWVGGSMRGSAETSPLKCDGEPRGGARAGGREGAMVAPFWPEDSFARLGQQMACSEEGRSLSRMVMDLGADLAHITLVDXXXXLARRPSVQRTIMRELGRMPLPPSLMDSDDEGXXXXXXXXXXXXXXXXXXGRGFGGAEHCESVLLSAGAKPSAAARARLPGVSDEGLKEELLRNVQDRVTKLTESLEAIRRENLHLRSRLTTTEAEKXXXXXXXXXXXXXXXAALARQLSAEDGGVAEVKGAVDKVVRDHLRSQQEARELWRAEGARGAATAAADAEARPAKSSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVALYFGVNPFLACAVAPDVTATAXXXXXXXXXXXXXARSAWS 415
            MSGRKAVEAAVPAACAAIRNRILGPALDQLSDSAYDDVTPPHSSPSDGSWVGGSMRGSAETSPLKCDGEPRGGARAGGREGAMVAPFWPEDSFARLGQQMACSEEGRSLSRMVMDLGADLAHITLVDXXXXLARRPSVQRTIMRELGRMPLPPSLMDSDDEGXXXXXXXXXXXXXXXXXXGRGFGGAEHCESVLLSAGAKPSAAARARLPGVSDEGLKEELLRNVQDRVTKLTESLEAIRRENLHLRSRLTTTEAEKXXXXXXXXXXXXXXXAALARQLSAEDGGVAEVKGAVDKVVRDHLRSQQEARELWRAEGARGAATAAADAEARPAKSSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVALYFGVNPFLACAVAPDVTATAXXXXXXXXXXXX ARSAWS
Sbjct:    1 MSGRKAVEAAVPAACAAIRNRILGPALDQLSDSAYDDVTPPHSSPSDGSWVGGSMRGSAETSPLKCDGEPRGGARAGGREGAMVAPFWPEDSFARLGQQMACSEEGRSLSRMVMDLGADLAHITLVDXXXXLARRPSVQRTIMRELGRMPLPPSLMDSDDEGXXXXXXXXXXXXXXXXXXGRGFGGAEHCESVLLSAGAKPSAAARARLPGVSDEGLKEELLRNVQDRVTKLTESLEAIRRENLHLRSRLTTTEAEKXXXXXXXXXXXXXXXAALARQLSAEDGGVAEVKGAVDKVVRDHLRSQQEARELWRAEGARGAATAAADAEARPAKSSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVALYFGVNPFLACAVAPDVTATAXXXXXXXXXXXXGARSAWS 415

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348733 vs. uniprot

BLAST of jgi.p|Trimin1|348733 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z441_9STRA	7.760e-210	99.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 222..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_30	contig	Contig_30:573109..578847 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348733	mRNA_5387	Tribonema minus UTEX_B_3156	mRNA	Contig_30 573109..579414 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348733|estExt_Genemark1.C_Ctg_300083 ID=Trimin1|348733|estExt_Genemark1.C_Ctg_300083|Name=jgi.p|Trimin1|348733|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=416bp
MSGRKAVEAAVPAACAAIRNRILGPALDQLSDSAYDDVTPPHSSPSDGSW
VGGSMRGSAETSPLKCDGEPRGGARAGGREGAMVAPFWPEDSFARLGQQM
ACSEEGRSLSRMVMDLGADLAHITLVDLGADLARRPSVQRTIMRELGRMP
LPPSLMDSDDEGDDDEEGEEEGEGRGEGEGGRGFGGAEHCESVLLSAGAK
PSAAARARLPGVSDEGLKEELLRNVQDRVTKLTESLEAIRRENLHLRSRL
TTTEAEKNCHLRPRLTATEAEKAALARQLSAEDGGVAEVKGAVDKVVRDH
LRSQQEARELWRAEGARGAATAAADAEARPAKSSRQQPPQSGLPPSSKEA
RRRRRHIYRLAAAGVASVIVVAAVALYFGVNPFLACAVAPDVTATAATAA
AAAAAAAKGARSAWS*