Trimin1|348689|estExt_Genemark1.C_Ctg_300022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348689
Unique NameTrimin1|348689|estExt_Genemark1.C_Ctg_300022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length785
Homology
BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: A0A835Z5N4_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N4_9STRA)

HSP 1 Score: 998 bits (2580), Expect = 0.000e+0
Identity = 784/784 (100.00%), Postives = 784/784 (100.00%), Query Frame = 0
Query:    1 MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ 784
            MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ
Sbjct:    1 MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHYETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASAAEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQFGYPEFGSGVPGTRAQVPTTSDAQQPASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGDFGYKQQQQAGSPPGAWAGPAPGTPGMPQXXXXXXXXQQHGMYPGQPAXXXXXXXXXXXXXXXXXWPGAAPQMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWGAEPYGSPGSPPSARPEAPYGDPYRREGRGGAXXXXXXXXXXXXXXXQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPPQRQXXXXXPRYDAYGRPLPPAPGAWGGDDGMYQEQRGGYGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYGPPQGAGPWGDERYGPXXXXXXXXYDRDPYGRPDDRGGYAPDARGVYGGXXXXXXXXXXXXXXXRPPGVAAGGPAQPPYGGDRYPPQYGGEVPQQXXXXXXXXXXXXXXXXXXXXXXXXXGGPGRDRFGGQGAPQQGGYGGGAPAQAXEQAGXXXXXXXXXXXXXXGPSQPWGQ 784          
BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: D8LJY1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY1_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.050e-9
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 0
Query:  483 PAPGAWGG----DDGMYQEQRGG-----------YGGXXGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYG-PPQ 614
            PA G +GG    +DG YQ   GG           YGG      ALVP+  G   A  GG  V++ GLQLV+GAW R+LVGKD+  A L  A+E+          GIA++T  A  ++++T+G VT RV  +L+ + + + GPYG PPQ
Sbjct:  493 PARGDYGGYYGRNDGYYQGPPGGNGAPTQQGNAEYGGFPAGSRALVPSNGG---APRGGLEVKEQGLQLVKGAWARILVGKDKTTAALYEAKEKA---------GIAAST--ASYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQ 626          
BLAST of jgi.p|Trimin1|348689 vs. uniprot
Match: A0A6H5KXY0_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY0_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.440e-9
Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 0
Query:  486 GAWGGDDGMYQEQRGGYGGXX----GEYG-------ALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDRGAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLDANGRRVDGPYG-PPQ 614
            G +G +DG YQ   GG GG       EYG       ALVP   G   A  GG  V++ GLQLV+GAW R+LVGKD+  A L  A+E+          G+A++T  A  ++++T+G VT RV  +L+ + + + GPYG PPQ
Sbjct:  446 GYYGRNDGYYQGPPGGNGGSRQQGNAEYGGFPAGSRALVPNNGG---APRGGLEVKEQGLQLVKGAWARILVGKDKTRAALHDAKEKA---------GVAAST--ATYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQ 572          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348689 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z5N4_9STRA0.000e+0100.00WW domain-containing protein n=1 Tax=Tribonema min... [more]
D8LJY1_ECTSI3.050e-940.54WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KXY0_9PHAE5.440e-941.13WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..293
NoneNo IPR availablePANTHERPTHR14596ZINC FINGER PROTEINcoord: 360..727
NoneNo IPR availablePANTHERPTHR14596:SF72DEFECTIVE CHORION-1 PROTEIN, FC177 ISOFORMcoord: 360..727
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 44..62
score: 9.753301
IPR001202WW domainCDDcd00201WWcoord: 44..62
e-value: 0.00159176
score: 34.811
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 40..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_30contigContig_30:143367..145945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348689mRNA_5322Tribonema minus UTEX_B_3156 mRNAContig_30 143224..146213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348689|estExt_Genemark1.C_Ctg_300022 ID=Trimin1|348689|estExt_Genemark1.C_Ctg_300022|Name=jgi.p|Trimin1|348689|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=785bp
MAGSLELKAMAAEGLSSSTSSARSSSIRSTNSSSSVQTKDVPPRVYYVHY
ETRRTQWERPAMPPAYQQQQQPHYEQAGAEDTDAEAGQEVDKQAADDASA
AEKGIAGGDDLRDSSEEDDANVALPSVDFMAQYSGNGPDLSPPPPPQQQQ
QHATTARPPAALQHQEQRPAAEEEQFGYPEFGSGVPGTRAQVPTTSDAQQ
PASGDGGENGAVPPLQHEQEQQQRRPMMHTHWAEPRAQSNGGESDGGRGD
FGYKQQQQAGSPPGAWAGPAPGTPGMPQQQQQPRQQQQHGMYPGQPAQPP
RQQPQQNMYPTQPAWPGAAPQMPPPQQQQQQRRQGREEEPERPPREVPGS
SSSGGGAPWQQQTPPPQQQQQQPPQQRWGAEPYGSPGSPPSARPEAPYGD
PYRREGRGGAPPQQYRQPPPQQQWGQQGPPPQQQQQQPPYGAQMPQQPYY
GGGPQQQQRGAPPQRQPPQQQPRYDAYGRPLPPAPGAWGGDDGMYQEQRG
GYGGGGGEYGALVPAGRGGSSAQGGGASVRDTGLQLVRGAWGRLLVGKDR
GAALLSSARERVSEGAAAASTGIASATWAAGARVRDTVGGVTQRVGTLLD
ANGRRVDGPYGPPQGAGPWGDERYGPPGGGGGGGYDRDPYGRPDDRGGYA
PDARGVYGGPPGQYGGGGRGREAYRPPGVAAGGPAQPPYGGDRYPPQYGG
EVPQQQEWQQQQQRRAVPPQQQQQRWGGPPGGPGRDRFGGQGAPQQGGYG
GGAPAQAGEQAGAFGGYGAPQGAAGGGPSQPWGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf