mRNA_5310 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA) HSP 1 Score: 721 bits (1860), Expect = 1.770e-258 Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 1
Query: 73 MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGDGEGTP 1170
MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGDGEGTP
Sbjct: 1 MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGDGEGTP 366
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA) HSP 1 Score: 558 bits (1439), Expect = 1.780e-194 Identity = 291/366 (79.51%), Postives = 306/366 (83.61%), Query Frame = 1
Query: 73 MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGR-AHAAPAAH-SGNGLGKLPVLLGRGLRQGG-----AGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQ 1149
M+PAEA AVADLDWEDWSGEGNFVHHMLAGSIAG+TEHTVMFPVDT+KTHIQCMRECPERQAG+RVLEMVRGQGMLRLWRGVGTMF+GCVPAHAAYFS+LE K RFGAN GGH PVAAAAAG ATVFHDA MTPMDVIKQRLQLGYYRGIGDCVRTI R EG ALYRSFPTTLFMNIPYGA+MVAANESLKTALRPRGDHTTAT+M AGCGAGAVAAAATTPLDVVKT LQTQA+ A R A AA A H + P+ G L G A GA A MPAVFHSNAA RC +GCGEKPEV LQYRG VDA R+I A +G G FRGVVPRL+VHAPSVAISWTTYETAKRWLQ
Sbjct: 1 MEPAEAAAVADLDWEDWSGEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQGCGEKPEVKLQYRGFVDAAREIRAVQGWSGLFRGVVPRLMVHAPSVAISWTTYETAKRWLQ 366
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE) HSP 1 Score: 345 bits (884), Expect = 8.120e-112 Identity = 175/242 (72.31%), Postives = 195/242 (80.58%), Query Frame = 1
Query: 61 DSGAMDPAEAVAVADLDWEDWS-GEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQA 783
+SG M A A + + DWEDW +GNF+HHM+AGSIAGITEHTVM+PVDT KT++QCMRECPE AG RV+EMVRGQGMLRLWRGVGTMF GCVPAHA YFSVLE K R G N GH+P AA AG ATVFHDA MTPMDV+KQRLQLGY++G+ DCV TI RTEG +A YRSFPTTLFMNIPYG VMVA NESLK +RP GD+ TF+ AG GAGA+AA AT PLDVVKTRLQTQA
Sbjct: 3 ESGTM--AGASSDFNEDWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQA 242
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA) HSP 1 Score: 345 bits (886), Expect = 1.160e-109 Identity = 215/442 (48.64%), Postives = 257/442 (58.14%), Query Frame = 1
Query: 79 PAEAVAV----ADLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMR-----ECPERQA--------------------GARVLE-------------MVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAP------AAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAV--------------------FHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGD--GEGTP*RAPEPP 1191
PAE + ADLDWEDW + G+FVHHM+AGSIAGI EHT+M+PVDTIKT +QC C +++ GA V+E +V+ +G LRLWRGV TM CVPAHAAYFS LE+ K RFG N H + AAAAG +AT+FHD+ MTPMDVIKQRLQLGYY+G+ C +IVR EG RA Y S P TLFMN+PYG VMVAANES+K L+P GD+TT T++ AG GAGA+AAAATTPLD++KTRLQTQ + AP A G G G L + R A +AAA A+ S+ GC L+Y+G++DA +QIHAAEG GFFRG+VPRLLVH PSVAISWTTYET K L GTP P PP
Sbjct: 17 PAECHGIGGGDADLDWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQVTIQTTRSTGHAPHGRPPGAGEVGRGNGALHTVSPGFHRPTSASMS--PLAAAHEAMSPAGSRVSPXXXXXXXXXPPLRSHVTSSSDGGCRRAEHTRLRYKGIMDAAKQIHAAEGAMGFFRGMVPRLLVHTPSVAISWTTYETVKDMLSMGYFSTGTP---PSPP 453
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK) HSP 1 Score: 329 bits (843), Expect = 6.690e-105 Identity = 181/358 (50.56%), Postives = 222/358 (62.01%), Query Frame = 1
Query: 97 VADLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGAR-------VLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWL 1146
+ DL+WEDW E G+F HM+AGS AG+ EH M+P+DT+KTH+QC + P ++ +R ++ ++ QGMLRLWRGV TM +GC+PAHAAYFSV+E K FG N GH P+AAAA G +A+VFHD MTP+DV+KQRLQLGYYRGI DC RT+ RTEGA+A + S P TL MNIPYG +MVA NESLK LRP GD+ T MAAG GAGA A+ TTPLDVVKTRLQ Q A A +G G+G+ V AA R + L+Y G+ A R + EG RGF+RG +PRL V APSVAISWT YE K+ L
Sbjct: 7 IEDLEWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHK--PRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATAGAAAADFGHGRPAGRGVGQTRPTA--------------TVTAAQLGAARLEPRPRA---------LGLKYSGVAAAARAVWEREGPRGFYRGALPRLCVQAPSVAISWTAYEETKKLL 339
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD) HSP 1 Score: 316 bits (810), Expect = 1.120e-99 Identity = 184/360 (51.11%), Postives = 228/360 (63.33%), Query Frame = 1
Query: 97 VADLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECP------ERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPA---VFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWL 1146
V D DWE+W+ E G+F+HHMLAGS AG+ EH +FP+DTIKTH+QC R CP + A +++ +G LRL+RGV TM +PAHA YFSV E+ K GA++ H P+A+ AAG +ATV HD MTPMDVIKQRLQLGYY G+ DC +TIVR EG RALY SFPTT FMN+PY +MV+ANE+ K L P G+ + + A+G AGA+A T PLDV KTRLQTQ LL + + A + L RG VA +P + H AA K G +P++ LQYRGL DA+ QI A EGM GFFRGV PRLLV APSVA+SWTT+E K+ L
Sbjct: 19 VIDEDWEEWTPEKGSFLHHMLAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLKLSATHTARKLIAEEGPLRLFRGVSTMLSASLPAHAVYFSVFESMKKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRA--------RCSQLQTRG------------VALTVPTSCTIKHPVAA---TKTIGGEPKMRLQYRGLFDALVQIRAQEGMTGFFRGVYPRLLVQAPSVAVSWTTFEVLKKTL 354
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A8K1CHZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHZ7_PYTOL) HSP 1 Score: 312 bits (800), Expect = 3.070e-98 Identity = 178/364 (48.90%), Postives = 232/364 (63.74%), Query Frame = 1
Query: 79 PAEAVAVADLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECP------ERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAA-GRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWL 1146
P + V D DWE+W+ E G+F+HHM+AGS AG+ EH +FP+DTIKTH+QC R CP + A ++ +G LRL+RGV TM +PAH+ YFSV EA+K FGA++ H P+A+ AAG ATV HD MTPMDV+KQRLQLGYY G+GDC+R+I+R EG RALY SFPTT MN+PY +MV+ANE+ K L P G+ A ++A+G A T PLDV KTRLQTQ +L + P A L RG++ +V A A+ H++ + ++ GE P++ +QYRGL+DA+ QI A EG GFFRGV PRLLVHAPSVA+SWTT+E K+ L
Sbjct: 6 PILSTTVIDEDWEEWTPEKGSFLHHMVAGSAAGVAEHVSIFPIDTIKTHMQCQR-CPVNGKPLQISAVETARRLIAKEGPLRLFRGVSTMLSASLPAHSVYFSVFEAAKKAFGADSQEHTPLASGAAGVCATVCHDLIMTPMDVVKQRLQLGYYNGVGDCMRSIIRHEGVRALYISFPTTFIMNLPYSMIMVSANETFKKILNPSGELNVAAYIASGAAAXXXXXVLTNPLDVAKTRLQTQMMLVEEEATCRSGPCATQ---------LQTRGVKL--------SVPEAC-AIRHADVSTSASRPAGE-PKLRVQYRGLLDALIQIRAQEGYAGFFRGVGPRLLVHAPSVAVSWTTFEVLKKTL 349
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A024GCU6_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GCU6_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.370e-90 Identity = 169/366 (46.17%), Postives = 218/366 (59.56%), Query Frame = 1
Query: 94 AVADLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMREC------PERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRA-HAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPL----QYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGD 1155
++ D DWE+WS E G+F+HHM+AGS AG+ EH +FP+DTIKTH+QC +C + A + +++ +G LRL+RGV TM +PAHA YFS+ E +K FGAN P A+ AAG T+ HD MTPMD++KQRLQLGYY G+ +C++TI RTEG RA Y SFPTTL MN+PY +MV+ANES K L P G+ ++++G AGA+A A T PLDV KTRLQTQ + A H P + +V + +A EKPE L QYRGLVD + QI EG+ G+FRGV PRLL+HAPSVAISWTT+E K+ L D
Sbjct: 25 SMIDEDWEEWSPEKGSFLHHMMAGSAAGVAEHVSIFPIDTIKTHMQC-EQCHWSGSSSKSSALETLRRLLKEEGPLRLFRGVSTMLGASLPAHALYFSIFEYAKRTFGANRAEPTPFASGAAGVCGTICHDLIMTPMDLVKQRLQLGYYSGVWNCMKTITRTEGLRAFYISFPTTLLMNLPYSMIMVSANESFKKMLNPTGEMNVIAYLSSGAAAGALAGALTNPLDVAKTRLQTQNIFVENEIACHQVPCKQ-------------------------------LESVHRTQSASLSHTLAREKPEHVLRPRVQYRGLVDTLIQIGTQEGIGGYFRGVCPRLLLHAPSVAISWTTFEVLKKILDPD 358
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A1V9ZQ15_9STRA (Mitoferrin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ15_9STRA) HSP 1 Score: 290 bits (743), Expect = 5.690e-90 Identity = 169/360 (46.94%), Postives = 217/360 (60.28%), Query Frame = 1
Query: 103 DLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARV------LEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNG--LGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWLQGD 1155
D DWE+W+ E G+F+HHM AGS AG+ EH +FP+DTIKTH+QC R CP R+ +++ G LRL+RGV TM +PAHA YFSV EA K FGA++ P + AAG +AT+ HD MTPMDVIKQRLQLGYY G+ C++T++R EG R LY SFPTT FMN+PY +MV+ NES+K L P GD ++ +G AGA A T PLDV KTRLQTQ +L+ P A + G L K P + ++ P + EK +P QYRGL+DA+ QI+ EG++ FFRGV PR+ VHAPSVA+SWTT+E K L G+
Sbjct: 6 DEDWEEWTPEKGSFLHHMAAGSAAGVVEHVSIFPIDTIKTHMQCQR-CPVNSTVLRMNAFQTAKKLIAEDGPLRLFRGVSTMLGASLPAHALYFSVFEACKKSFGADSAELTPFQSGAAGVIATISHDFIMTPMDVIKQRLQLGYYAGVLHCMKTMIRQEGFRGLYISFPTTFFMNLPYSMIMVSTNESIKKVLNPSGDINVGAYIFSGAVAGAXXXALTNPLDVAKTRLQTQ-MLSLEEPTRVRPCAQNPKGISLNKPPSCQ---------------IQSSAPHIMLQ----------AEK-RMPFQYRGLLDAMFQIYKQEGIKAFFRGVGPRVCVHAPSVAVSWTTFEVLKNVLAGE 337
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Match: A0A6G0XW02_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW02_9STRA) HSP 1 Score: 289 bits (740), Expect = 8.920e-90 Identity = 167/355 (47.04%), Postives = 211/355 (59.44%), Query Frame = 1
Query: 103 DLDWEDWSGE-GNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECP------ERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKGCGEKPEVPLQYRGLVDAVRQIHAAEGMRGFFRGVVPRLLVHAPSVAISWTTYETAKRWL 1146
D DWE+W+ E G+F++HM+AGS AG+ EH +FP+DTIKTH+QC R CP + A +++ G +RL+RGV TM +PAHA YFSV EA K FGA++ H P+ + AAG +ATV HD MTPMDVIKQRLQLGYY G+ DC++T++RTEG ALY SFPTTLFMN+PY +MV NES+K L P G+ ++ +G A T PLDVVKTRLQTQ LL L L G + GGA C + +K +QY GL DA QI+ EG+ GFFRGV PR+ VHAPSVA+SWTT+E K+ L
Sbjct: 6 DEDWEEWTPEKGSFLNHMIAGSAAGVVEHCSIFPIDTIKTHMQCQR-CPVNNGAIQMSAFQTASKLIAQDGPMRLFRGVSTMLGASLPAHALYFSVFEACKKAFGADSPDHTPIQSGAAGVIATVTHDLVMTPMDVIKQRLQLGYYSGVFDCMKTMIRTEGLHALYISFPTTLFMNLPYSMIMVTTNESMKKLLNPSGEINVGAYVMSGVIAXXXXXXVTNPLDVVKTRLQTQLLL--------------------LDETLTCGGKVGGA--------------------KNCDQQLLKKGAPKMQYSGLADAFNQIYKQEGVPGFFRGVGPRVCVHAPSVAVSWTTFEVLKKLL 319 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348681 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5310 ID=mRNA_5310|Name=jgi.p|Trimin1|348681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1785bp|location=Sequence derived from alignment at Contig_30:78146..81425- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCCTTGGGGGCGGCGTGGTAACGGAGGGGGTCACCTAAAGCACGAAGCTTback to top protein sequence of jgi.p|Trimin1|348681 >Trimin1|348681|estExt_Genemark1.C_Ctg_300010 ID=Trimin1|348681|estExt_Genemark1.C_Ctg_300010|Name=jgi.p|Trimin1|348681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=367bp MDPAEAVAVADLDWEDWSGEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHback to top mRNA from alignment at Contig_30:78146..81425- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5310 ID=mRNA_5310|Name=jgi.p|Trimin1|348681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3280bp|location=Sequence derived from alignment at Contig_30:78146..81425- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_30:78146..81425- >mRNA_5310 ID=mRNA_5310|Name=jgi.p|Trimin1|348681|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1101bp|location=Sequence derived from alignment at Contig_30:78146..81425- (Tribonema minus UTEX_B_3156 )back to top |