Trimin1|352031|estExt_Genemark1.C_Ctg_1060074 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352031
Unique NameTrimin1|352031|estExt_Genemark1.C_Ctg_1060074
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length69
Homology
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BLAST of jgi.p|Trimin1|352031 vs. uniprot
Match: A0A835ZJY6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJY6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.930e-16
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   36 RSTEQCCAERCGCAGVSNNTATQGLAKTAGWQC 68
            RSTEQCCAERCGCAGVSNNTATQGLAKTAGWQC
Sbjct:   36 RSTEQCCAERCGCAGVSNNTATQGLAKTAGWQC 68
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352031 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZJY6_9STRA3.930e-16100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:487397..488749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352031mRNA_9533Tribonema minus UTEX_B_3156 mRNAContig_106 487210..488751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352031|estExt_Genemark1.C_Ctg_1060074 ID=Trimin1|352031|estExt_Genemark1.C_Ctg_1060074|Name=jgi.p|Trimin1|352031|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=69bp
AAAAAAAGAAAATGAAAAAADAAAAAAAAAATTTARSTEQCCAERCGCAG
VSNNTATQGLAKTAGWQC*
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