mRNA_473 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157498
Unique NamemRNA_473
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.120e-126
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 
Query:    1 MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS 537
            MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS
Sbjct:    1 MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCRSSTCLAYSLPTSTLLPVRFMVLKFGLSAS 179
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A834Y4U7_9HYME (Uncharacterized protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y4U7_9HYME)

HSP 1 Score: 125 bits (314), Expect = 1.020e-32
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 420
            ++V++GDCG GKT +++R+ +G F         + +T+GVDF  KTV ++GKRV+LQ+WDT+G  R+  +   Y  +A+G+ LVYD T   SF  VQ  W+  V+ Y   +V  +LVGNKCDL SL+EV+   A+
Sbjct:   22 KIVLIGDCGTGKTCVVQRFRSGTFI------ERHGNTIGVDFSMKTVMIDGKRVKLQIWDTAGQERFSGITQSYYRSANGIILVYDITKKSSFLSVQK-WVEEVRRYTSSSVMLILVGNKCDLESLREVETSEAE 149
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A8J2RY20_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RY20_9CRUS)

HSP 1 Score: 124 bits (310), Expect = 3.860e-32
Identity = 56/134 (41.79%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAA 417
            ++V++GDCG+GKT++++R+ +G F         Y++T+GVDF  KTV +EGK+V+LQ+WDT+G  R+ ++   Y  +A+GV LVYD T   SF  +Q  W+  ++ +    + ++L+GNKCD+ SL+EV+ V A
Sbjct:   19 KIVVIGDCGIGKTSLVQRFKSGVFT------ERYTNTIGVDFAMKTVVIEGKQVKLQIWDTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQK-WMEEIRRFTANNISWVLIGNKCDMDSLREVEQVEA 145
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A482WIF0_LAOST (Uncharacterized protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482WIF0_LAOST)

HSP 1 Score: 123 bits (309), Expect = 5.880e-32
Identity = 59/135 (43.70%), Postives = 90/135 (66.67%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 420
            ++V++GDCGVGKT +++R+ +G F         + +TLGVDF  KTV ++GK+V+LQ+WDT+G  R+ ++   Y  +A+GV +VYD T   SF  +Q  W+  V+ Y    V  +LVGNKCD+ SL+EV+ V A+
Sbjct:   23 KIVLIGDCGVGKTCVVQRFKSGNFV------ERHGNTLGVDFSMKTVTVDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLGLQR-WIEEVRRYTASNVMLILVGNKCDMESLREVEFVEAE 150
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: E9G2G0_DAPPU (Uncharacterized protein n=6 Tax=Daphnia TaxID=6668 RepID=E9G2G0_DAPPU)

HSP 1 Score: 122 bits (306), Expect = 1.490e-31
Identity = 54/134 (40.30%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAA 417
            ++V++GDCG+GKT++++R+ +G F         Y++T+GVDF  KT+ +EGK+V+LQ+WDT+G  R+ ++   Y  +A+GV LVYD T   SF  +Q  W+  ++ +    + ++L+GNKCD+ +L+EV+ V A
Sbjct:   19 KIVVIGDCGIGKTSLVQRFKSGVFT------ERYTNTIGVDFAMKTIVIEGKQVKLQIWDTAGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQK-WMEEIRRFTANNISWVLIGNKCDMDTLREVEQVEA 145
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: UPI00187DA68D (ras-related protein Rab-43 n=1 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187DA68D)

HSP 1 Score: 122 bits (306), Expect = 1.490e-31
Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 420
            ++V++GDC VGKT I++R+  G+F         +++T+GVDF  KT+ ++GKRV+ Q+WDT+G  R+ ++   Y  +ADGV +VYD T   SF  +Q  W+  V+ Y    V  +LVGNKCDL SL+EV+   A+
Sbjct:   23 KIVLIGDCSVGKTKIVQRFKTGHFT------ESHANTIGVDFSMKTITVDGKRVKTQIWDTAGQERFRTITQSYYRSADGVIIVYDITKRSSFLSIQR-WIEEVRRYTTLNVMLILVGNKCDLESLREVEFAEAE 150
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A1S3CXW1_DIACI (ras-related protein Rab-43 n=2 Tax=Psylloidea TaxID=33375 RepID=A0A1S3CXW1_DIACI)

HSP 1 Score: 122 bits (306), Expect = 1.700e-31
Identity = 59/130 (45.38%), Postives = 87/130 (66.92%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVD 405
            ++V++GDCGVGKT ++ R+ +G F   T       +T+GVDF  KTV+++GK+V+LQ+WDT+G  R+ ++   Y  +A+GV +VYD T   SF  +Q  W+  V+ YA   V  +LVGNKCDL S +EVD
Sbjct:   23 KVVLIGDCGVGKTCVVHRFRSGDFVEKTG------NTIGVDFSMKTVNIDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRASFLGLQK-WIDEVRRYAASNVLLILVGNKCDLESEREVD 145
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 122 bits (307), Expect = 1.990e-31
Identity = 58/124 (46.77%), Postives = 88/124 (70.97%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLT 387
            +LV++GD GVGK+A++RR+++G +       T Y++T+GVDFG ++  L+GK+V+LQ+WDT+GS R+ ++ S Y   A GV +V+D +  +SF+RV+ YWL      AP   R +LVGNKCDLT
Sbjct:   16 KLVVIGDLGVGKSALLRRFVDGLY------DTTYTATIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVR-YWLAEAGKSAPVTARRMLVGNKCDLT 132
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: A0A6L2PMK2_COPFO (Uncharacterized protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PMK2_COPFO)

HSP 1 Score: 122 bits (305), Expect = 3.860e-31
Identity = 58/135 (42.96%), Postives = 89/135 (65.93%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQ 420
            ++V++GDCGVGKT +++R+ +G F         + +T+GVDF  KTV ++GK+V+LQ+WDT+G  R+ ++   Y  +A+GV +VYD T   SF  +Q  W+  V+ Y    V  +LVGNKCDL SL+EV+   A+
Sbjct:   22 KIVLIGDCGVGKTCVVQRFKSGTFV------ERHGNTIGVDFSMKTVIVDGKKVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLQR-WIEEVRRYTASNVMLILVGNKCDLESLREVEFAEAE 149
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BLAST of jgi.p|Trimin1|157498 vs. uniprot
Match: UPI000C6D7DD1 (ras-related protein Rab-43-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D7DD1)

HSP 1 Score: 120 bits (302), Expect = 4.690e-31
Identity = 54/129 (41.86%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:   16 RLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEV 402
            ++V++GDCGVGKT ++ R+ +G +         Y +T+GVDF  KT+ +EGKR++LQ+WDT+G  R+ ++   Y  +A+GV +VYD T   +F+ VQ +W+  V+ +    +  LLVGNKCD+ +L+EV
Sbjct:   12 KIVLIGDCGVGKTCVVHRFRSGTYV------QRYGNTIGVDFAMKTLTIEGKRIKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRATFESVQ-HWVEEVRRFTAPDIPLLLVGNKCDMEALREV 133
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157498 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYU6_9STRA1.120e-126100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A834Y4U7_9HYME1.020e-3243.70Uncharacterized protein n=1 Tax=Aphidius gifuensis... [more]
A0A8J2RY20_9CRUS3.860e-3241.79Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A482WIF0_LAOST5.880e-3243.70Uncharacterized protein n=2 Tax=Delphacidae TaxID=... [more]
E9G2G0_DAPPU1.490e-3140.30Uncharacterized protein n=6 Tax=Daphnia TaxID=6668... [more]
UPI00187DA68D1.490e-3142.96ras-related protein Rab-43 n=1 Tax=Bradysia coprop... [more]
A0A1S3CXW1_DIACI1.700e-3145.38ras-related protein Rab-43 n=2 Tax=Psylloidea TaxI... [more]
A0A7S1R9U1_ALECA1.990e-3146.77Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A6L2PMK2_COPFO3.860e-3142.96Uncharacterized protein n=1 Tax=Coptotermes formos... [more]
UPI000C6D7DD14.690e-3141.86ras-related protein Rab-43-like n=1 Tax=Centruroid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1756589..1759091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157498|e_gw1.3.285.1
BRITEko00000,ko04031,ko04147
KEGG koko:K07930
GOsGO:0000139,GO:0001894,GO:0002065,GO:0002067,GO:0002376,GO:0003674,GO:0003824,GO:0003924,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0006810,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007030,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008047,GO:0008150,GO:0009888,GO:0009987,GO:0010033,GO:0010256,GO:0012505,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019058,GO:0019068,GO:0023052,GO:0030139,GO:0030154,GO:0030234,GO:0030695,GO:0030855,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032482,GO:0032501,GO:0032502,GO:0032588,GO:0034097,GO:0034341,GO:0035526,GO:0035556,GO:0035883,GO:0036477,GO:0042221,GO:0042592,GO:0043025,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044297,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0045202,GO:0045335,GO:0045595,GO:0048856,GO:0048869,GO:0048871,GO:0048872,GO:0048873,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051704,GO:0051716,GO:0060249,GO:0060429,GO:0060589,GO:0060786,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071840,GO:0090382,GO:0097458,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:1901998
Preferred nameRAB43
DescriptionGTP binding. It is involved in the biological process described with
COG categoryU
Max annot lvl33208|Metazoa
EggNOG OGsKOG0084@1|root,KOG0084@2759|Eukaryota,38GAJ@33154|Opisthokonta,3BHNS@33208|Metazoa,3D3MC@33213|Bilateria,41U1V@6656|Arthropoda
Evalue2.45e-32
Seed ortholog6669.EFX86314
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiondivergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator
Ec32 orthologEc-16_003120.1
TranscriptId157820
TrackFilteredModels1
ProteinId157498
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157498gene_473Tribonema minus UTEX_B_3156 geneContig_3 1756589..1759091 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157498Trimin1|157498|e_gw1.3.285.1Tribonema minus UTEX_B_3156 polypeptideContig_3 1756589..1759091 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_473_3exon_473_3Tribonema minus UTEX_B_3156 exonContig_3 1756589..1756765 -
exon_473_2exon_473_2Tribonema minus UTEX_B_3156 exonContig_3 1757310..1757522 -
exon_473_1exon_473_1Tribonema minus UTEX_B_3156 exonContig_3 1758942..1759091 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_473CDS_473Tribonema minus UTEX_B_3156 CDSContig_3 1758942..1759091 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_473 ID=mRNA_473|Name=jgi.p|Trimin1|157498|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=540bp|location=Sequence derived from alignment at Contig_3:1756589..1759091- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTCACAGGTGCGCCTGGTCATGGTCGGAGATTGTGGTGTGGGGAA
GACAGCCATCATGAGGAGGTATCTTAACGGCTACTTCTGTGGGGACACCG
CAAAAGGCACCCCCTACAGCTCCACGCTGGGGGTGGATTTCGGCTGCAAG
ACGGTGCACCTGGAGGGCAAGCGCGTGCGCCTGCAGGTGTGGGACACGAG
CGGCAGCGCGCGCTACGGCAGCGTGGTGAGCCACTACCTGCACGCCGCCG
ACGGCGTGGCCCTGGTGTACGACACGACGTGCGCGGAGTCGTTTCAGCGC
GTCCAGGACTACTGGCTGCCGCTGGTCAAGTCGTACGCGCCCGAGGCCGT
GCGCTTCCTGCTGGTTGGCAACAAGTGCGACCTTACAAGCCTGAAGGAGG
TGGACGCTGTAGCTGCACAGGTATGTACAGCTTCAAAATGCAACTGCCGA
TCCAGCACTTGTCTTGCTTATAGCTTGCCTACCAGCACCCTCTTACCTGT
CCGCTTCATGGTGTTGAAGTTTGGACTGTCCGCTTCATAG
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protein sequence of jgi.p|Trimin1|157498

>Trimin1|157498|e_gw1.3.285.1 ID=Trimin1|157498|e_gw1.3.285.1|Name=jgi.p|Trimin1|157498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
MLSQVRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSSTLGVDFGCK
TVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQR
VQDYWLPLVKSYAPEAVRFLLVGNKCDLTSLKEVDAVAAQVCTASKCNCR
SSTCLAYSLPTSTLLPVRFMVLKFGLSAS*
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mRNA from alignment at Contig_3:1756589..1759091-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_473 ID=mRNA_473|Name=jgi.p|Trimin1|157498|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2503bp|location=Sequence derived from alignment at Contig_3:1756589..1759091- (Tribonema minus UTEX_B_3156 )
ATGCTGTCACAGGTGCGCCTGGTCATGGTCGGAGATTGTGGTGTGGGGAA
GACAGCCATCATGAGGAGGTATCTTAACGGCTACTTCTGTGGGGACACCG
CAAAAGGCACCCCCTACAGCTCCACGCTGGGGGTGGATTTCGGCTGCAAG
GTAATCTTTGCATCTCCATTCACAACTCTGCATCAACGCTGTGCTTCACA
TGAATCATGTGATCAGGAACTGCTGAGGCAATGACTACCTACTACTGCAG
TACCACGTGTGCCGCAGTCGTATACCAGCAACAGCAGCAGCAGCCTAGGT
AGGTACCATGACATGCCTGCTGTATGCCACGTGAAGGTAGGCGGCACAGA
GTGCGGGTACCTGAACGCACAGCACAAACATATTGTCCTGTGTTGATGTA
TATGGAACGCCGCAAACAAACTGTGGCAGCCGCTCCCTTGCGCTCAGACA
CAAGACCTGCCAGCACACCCGCAGCAAAAGCAGCAATATGCTGGCAGTTC
AGCGTTTGTAGGTGCACGATGTTGGGCAAAACTGACAGACTACTGTGGGT
GCCCGCAAAACTGTGTCGCTCGCACAGCAGCGCAGATTTGGTCACTGTGT
ATAGGAGGGTCACATCCGGCGCCAGCGCGCGTTATGCTGGAATTATGCAA
CACCCATGGCACTAGAACGATGCCGACTGCATGTCATAAGATTGCGCCGG
CTCTCCCAATGTCGGGTTGTGGCGCACCCCGTGCGCCCCGTGTGTGGTAC
CTGCATACATCTCCTATCATGCCCCGCCCAGTCATGCTGTCTGGCTCGTC
GCCGTGGAGACCTGGCACTCTAAAACGGGGAGGCTGTGTACGAGTCTTGT
ACTTCAATTCAGTGGCAGAGCCAGAGTCAGCGTCGGAGTCGCCGTATCTT
CGCCCGCACCTCACCACGCCAGCGCCTCACGCAGGGCGCTCGGAAGCGGT
CTGCCAGTGAGCAGCAGCAGGCGGTCAGCACAGCACCGCAGTATGTCCAA
GGCTATCGCCAACCGCATGGCGCTTGCGTACGCCGTGCTCTAACCCTAAC
CCCACTCGCGCGCGCAGTATGCATTGAATGAGCCGCGATCAATCGACCTT
CGCCTGGACCTTGTTTTTGCAACCTTTCACAACAAGCTCGCTTGTAAATA
CACTACAAACATTGTGAAATTTTTTACATCGTTTGTCCAAGGTTTGGGTC
TGCCGTAGGAAGACAAAAAGAAAGTTTAAAGCAATACCTCACAAAACAAC
GCGCGCCCCCGCCGCAGACGGTGCACTTGGAGGGCAAACGCGTGCGCCTG
GACCTTGTTATTGCAGCCTTTTAGAAAAAGGCCGCTTACTCACCACTGTA
CAAACAGGTGAAAAATGTTGCATCGTTTGGTTAAGGTTTGGGTCTGCCCT
AGAAGACAAAGAAGGAAGTTAACAATACCGCACAAAACAATGCGCGCCCC
CGCCGCACACGGTGCACCTGGAGGGCAAGCGCTATAGCTATAACCTCCAA
CCGCGTGGCGCGTGTGCACGCCGTGCTCTAACCCTAACCCTAACTGCGCG
CGCGCGACCCCCGCCACAGACGGTGCACCTGGAGGGCAAGCGCGTGCGCC
TGCAGGTGTGGGACACGAGCGGCAGCGCGCGCTACGGCAGCGTGGTGAGC
CACTACCTGCACGCCGCCGACGGCGTGGCCCTGGTGTACGACACGACGTG
CGCGGAGTCGTTTCAGCGCGTCCAGGACTACTGGCTGCCGCTGGTCAAGT
CGTACGCGCCCGAGGCCGTGCGCTTCCTGCTGGTGAGCGCTGCCGCTGCA
TGGAATTGCTGCCATAGTTTCAGTGTCGTCAGCGGGTTTGTGCTGCCATG
CGGCGGTCTGCCGCTCGCGGGCGCTTACAGCGGGCTGCCAGTACGTGCAG
GAGGGTTGCTGTCGTAGTGATGCTGGCGCTAACTGTTTGTGTTGCGCCAG
ATGCCTCTTATTTGCATACGCAAAAGCGTTCAAAGCTGAATGGCAGGGTC
ACACTGGACACCACGGTGCACATCGCTTTCAAGTGCTTTATGCTTGTTTT
CAACAACTGGCTTCGGAAACCCATGTGCGGATACCTACTGAAGGCCGTGG
CCACCCCTACCTCAACACCCCGTTTCTCGATGTCGTTGCGCGATCTGTTG
AACATGCACTTCAAGTCACAAACTAGAATATGAGTTTGTGCTTAGCTGCT
AATGATCACCTCATGCATTGTATAGAACTCGGTGGCCTCAGGCAAACGTC
ATTATTGTGCACTTTTGAAAATCGCAAGTTTGCCTCAACACTGTACTGAC
CATGGCATGCTCTTGCTCTTTGTCAGGTTGGCAACAAGTGCGACCTTACA
AGCCTGAAGGAGGTGGACGCTGTAGCTGCACAGGTATGTACAGCTTCAAA
ATGCAACTGCCGATCCAGCACTTGTCTTGCTTATAGCTTGCCTACCAGCA
CCCTCTTACCTGTCCGCTTCATGGTGTTGAAGTTTGGACTGTCCGCTTCA
TAG
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Coding sequence (CDS) from alignment at Contig_3:1756589..1759091-

>mRNA_473 ID=mRNA_473|Name=jgi.p|Trimin1|157498|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=540bp|location=Sequence derived from alignment at Contig_3:1756589..1759091- (Tribonema minus UTEX_B_3156 )
ATGCTGTCACAGGTGCGCCTGGTCATGGTCGGAGATTGTGGTGTGGGGAA
GACAGCCATCATGAGGAGGTATCTTAACGGCTACTTCTGTGGGGACACCG
CAAAAGGCACCCCCTACAGCTCCACGCTGGGGGTGGATTTCGGCTGCAAG
ACGGTGCACCTGGAGGGCAAGCGCGTGCGCCTGCAGGTGTGGGACACGAG
CGGCAGCGCGCGCTACGGCAGCGTGGTGAGCCACTACCTGCACGCCGCCG
ACGGCGTGGCCCTGGTGTACGACACGACGTGCGCGGAGTCGTTTCAGCGC
GTCCAGGACTACTGGCTGCCGCTGGTCAAGTCGTACGCGCCCGAGGCCGT
GCGCTTCCTGCTGGTTGGCAACAAGTGCGACCTTACAAGCCTGAAGGAGG
TGGACGCTGTAGCTGCACAGGTATGTACAGCTTCAAAATGCAACTGCCGA
TCCAGCACTTGTCTTGCTTATAGCTTGCCTACCAGCACCCTCTTACCTGT
CCGCTTCATGGTGTTGAAGTTTGGACTGTCCGCTTCATAG
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