mRNA_478 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|55205
Unique Name	mRNA_478
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A835Z6Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q3_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 4.820e-153
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1

Query:   19 MMVRCAALCVAGLVTGVTCFVPLGPALSTVRRSPSYGTCTRMSASLTGDPMLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAEVAKLENL 681
            MMVRCAALCVAGLVTGVTCFVPLGPALSTVRRSPSYGTCTRMSASLTGDPMLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAEVAKLENL
Sbjct:    1 MMVRCAALCVAGLVTGVTCFVPLGPALSTVRRSPSYGTCTRMSASLTGDPMLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAEVAKLENL 221

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: D8LFF0_ECTSI (Conserved hypothetical protei n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF0_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 3.100e-52
Identity = 99/185 (53.51%), Postives = 122/185 (65.95%), Query Frame = 1

Query:  133 CTRMSASLTGDPMLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETI--HLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAEVAKLENL 681
            C    A+   DPML PL  DDY+A GLA C+VM ++ K +E YV+EPLTA TLETI     +ETSYK V    A D F G P+ PTG+ V+ L  +L     A +CEN VER+LAAART +RR E Q+   G     FNF   RKRILN  +EPSF DNVKQDKSIDVYGR+++ A ++A LEN+
Sbjct:   61 CMEGQAAYLDDPMLVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPARPTGIQVDKLK-ILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEEAKQIADLENM 244

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: W7TL97_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL97_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.120e-48
Identity = 95/171 (55.56%), Postives = 119/171 (69.59%), Query Frame = 1

Query:  172 LKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIG-DPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGR-DDDNAAEVAKLEN 678
            L  L  +DY+A+GLA+CY + +  K +E  V EPLTAGTLE + LGV TSYK VMGL  G+ F G D   P+ VN+E L PL + GE    CE+ + RS+AAART +RR E Q++ +G    +FNF   +KR+LNQV+EPSFADNVKQDKSIDVYGR D+D   EV KL N
Sbjct:   47 LVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAK-GETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLAN 216

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A0G4F5N3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F5N3_VITBC)

HSP 1 Score: 166 bits (420), Expect = 5.690e-47
Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 1

Query:  178 PLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDP-SAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGR-DDDNAAEVAKLE 675
            PL +DDY+A+GLA CY++ + NK EE +V EPLTAGTLETI  GV+TSY+ VM L  GD F GD  ++PTG  +  + P++ +GE A   E   ER LAAART RRR E QL+ +G    +FNF   RKRILNQ +EPSF DNVKQ  SIDVYGR + +++ E A+L+
Sbjct:   70 PLKSDDYIALGLACCYLLNDKNKLEEYWVIEPLTAGTLETIDRGVDTSYRRVMALTLGDLFEGDDVNSPTGARLSAVEPMI-SGEEARFSEALTERVLAAARTFRRRPEAQLLDLGEVADDFNFSTERKRILNQKFEPSFDDNVKQHSSIDVYGRTESESSDEQAELD 236

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A7S3K277_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K277_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.860e-36
Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1

Query:  172 LKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDN 651
            ++ L AD Y+A+GLA  Y   +    +E  + EPLTAGTLET+ LGV TSY  +M    G+   GD      V ++ +  L+Q+ +   +CEN  ER+ AAART RRR E Q++ +G+ R +FNF   RKR+++Q+YEPSF DNVKQ  SIDVY R+DD+
Sbjct:   47 MEALAADAYIAMGLAKVYKTNDDGGVDEMLLIEPLTAGTLETLELGVPTSYCRIMATTIGEILDGDQ-----VKLDNIQALIQD-DTVSICENMSERAQAAARTFRRRPEAQILDIGSIRDDFNFNTDRKRVIDQIYEPSFDDNVKQHASIDVYNRNDDD 200

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A7S1DED9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DED9_HEMAN)

HSP 1 Score: 126 bits (316), Expect = 1.590e-31
Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = 1

Query:  190 DDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIH----LGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQI-VRKRILNQVYEPSFADNVKQDKSIDVYGR 639
            DDY+A GLA CY M E N     +V EPLT  TLE I      G  TSYK VM L  GD  +G   APTG+N+E L+PL   GE+A  CE A++R+ AA RT++RR+E Q+V VG    ++ F   V KRILN V   +  DNVKQD SIDVYGR
Sbjct:   74 DDYLAFGLAHCYTMDEGNLAP-YWVVEPLTGATLECITGLQGKGTVTSYKRVMALTVGDAVLGGVEAPTGLNMEALAPLTA-GEDAHQCEAALDRAFAAGRTLKRRQEAQVVKVGEICEDYRFDPKVDKRILNAVNVVNDDDNVKQDISIDVYGR 226

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A7S0BM87_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BM87_9RHOD)

HSP 1 Score: 111 bits (277), Expect = 2.080e-26
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 1

Query:  184 GADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIH-LGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGRDDDNAA 657
            G +DY+A+G+A+C+      + EE  V EPL++ TLE I  + V TSYK +MG+K G+        P  +N   L     +G+ A+  EN  ER+ AAART  RR E +LV +G   +   F   RKRILN  +EP+F DNVKQD SIDVY R+ D+ A
Sbjct:   34 GPEDYIALGIAVCFKERVRGELEEVVVVEPLSSATLENISTMDVPTSYKKIMGMKLGEI-------PEQIND--LPGSFIDGDRAVWGENFQERANAAARTFLRRPEAKLVDLGEISTKVQFSTERKRILNSTWEPNFEDNVKQDISIDVYNREADDLA 183

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: M2Y193_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y193_GALSU)

HSP 1 Score: 106 bits (264), Expect = 5.470e-24
Identity = 65/165 (39.39%), Postives = 87/165 (52.73%), Query Frame = 1

Query:  190 DDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDKSIDVYGR--DDDNAAEVAKLEN 678
            D+Y  +GLA C+    + K +E  V EP+   TLETI  GV TSYK ++                 +++  + P     E    CEN  ER  AA RT R R E + + +G      NF    KR+LN+ +EPSF DNVKQD SIDVYGR  D++  +E+ KL N
Sbjct:   78 DEYTVLGLAFCFQRDSNGKLQELVVIEPVPTSTLETILQGVPTSYKRLVATVYS----------RAMDISSIPPAFVEDERVSFCENYSERLQAATRTYRARLEAKKIQLGEVYVTINFSTSPKRVLNEKFEPSFEDNVKQDISIDVYGRKKDEEVKSEIEKLYN 232

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A1X6P8L3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8L3_PORUM)

HSP 1 Score: 94.4 bits (233), Expect = 1.030e-19
Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 1

Query:  193 DYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIH-LGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQ-LVAVGATRSNFNFQIVR-----KRILNQVYEPSFADNVKQDKSIDVYGRDDDN--AAEVAKLEN 678
            DY  VGLA+CY   ++NK +   V EPL+ GTLE +   G  TSYK ++G        G P  P+    E+    LQ G++A   E+  ER  AAART +RR   + ++ VG  ++  +  +       +RILN+ +EP F DNVKQDK+IDVYGR ++   AA+V KL N
Sbjct:   48 DYCPVGLAVCYQRNQNNKLDAVLVVEPLSTGTLENVTGTGQPTSYKRILGATIE----GLPDNPS----ELPEDFLQ-GDSASFSEDFAERMCAAARTFKRRPISKGILGVGEVKTAEDGTLTFCTDGIQRILNEEWEPKFDDNVKQDKTIDVYGRGEEEGGAADVQKLYN 209

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BLAST of jgi.p|Trimin1|55205 vs. uniprot
Match: A0A5B8MGH2_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGH2_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 1.680e-19
Identity = 67/177 (37.85%), Postives = 94/177 (53.11%), Query Frame = 1

Query:  151 SLTGDPMLKPLGADD--YMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVETSYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSLAAARTMRRRKEGQ----LVAVGATRSNFNFQIVR-KRILNQVYEPSFADNVKQDKSIDVYGRDDDNAAE 660
            S T D M     AD   Y+A+G+++CY   E  K  E  V EP+ A TLET+ +G  TS+K V G+  G     D           +S L +  + A  CE+   R+   ART  R    +    +V +G  ++++NF I + KR+LN V+E +  DN+KQDKSIDVYGR DD   E
Sbjct:   35 SNTYDEMFATTEADQGAYLALGVSVCYRKDEEGKLSEIQVIEPINATTLETMSIGAATSFKYVTGVTLGGVLDQDK----------VSMLPEEYQKAEFCEDFKNRAEICARTWDRPYPQESLMDIVPLGNAKTDWNFDISKHKRVLNLVHEVTDEDNIKQDKSIDVYGRFDDEEEE 201

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|55205 vs. uniprot

BLAST of jgi.p|Trimin1|55205 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z6Q3_9STRA	4.820e-153	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LFF0_ECTSI	3.100e-52	53.51	Conserved hypothetical protei n=2 Tax=Ectocarpus T...	[more]
W7TL97_9STRA	1.120e-48	55.56	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A0G4F5N3_VITBC	5.690e-47	54.76	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A7S3K277_9STRA	1.860e-36	46.88	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S1DED9_HEMAN	1.590e-31	51.61	Hypothetical protein n=1 Tax=Hemiselmis andersenii...	[more]
A0A7S0BM87_9RHOD	2.080e-26	44.03	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
M2Y193_GALSU	5.470e-24	39.39	Uncharacterized protein n=1 Tax=Galdieria sulphura...	[more]
A0A1X6P8L3_PORUM	1.030e-19	40.94	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A5B8MGH2_9CHLO	1.680e-19	37.85	Uncharacterized protein n=1 Tax=Chloropicon primus...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_3	contig	Contig_3:1785799..1789253 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|55205\|CE55204_792
Max annot lvl	2759\|Eukaryota
EggNOG OGs	29JX3@1\|root,2S2G2@2759\|Eukaryota
Evalue	4.44e-54
Seed ortholog	2880.D8LFF0
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	conserved hypothetical protei
Ec32 ortholog	Ec-07_006030.1
TranscriptId	55527
Track	FilteredModels1
ProteinId	55205

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|55205	gene_478	Tribonema minus UTEX_B_3156	gene	Contig_3 1785799..1789253 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|55205	Trimin1\|55205\|CE55204_792	Tribonema minus UTEX_B_3156	polypeptide	Contig_3 1785817..1789113 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_478_1	exon_478_1	Tribonema minus UTEX_B_3156	exon	Contig_3 1785799..1785911 +
exon_478_2	exon_478_2	Tribonema minus UTEX_B_3156	exon	Contig_3 1786269..1786408 +
exon_478_3	exon_478_3	Tribonema minus UTEX_B_3156	exon	Contig_3 1786846..1786937 +
exon_478_4	exon_478_4	Tribonema minus UTEX_B_3156	exon	Contig_3 1787695..1787787 +
exon_478_5	exon_478_5	Tribonema minus UTEX_B_3156	exon	Contig_3 1788375..1788512 +
exon_478_6	exon_478_6	Tribonema minus UTEX_B_3156	exon	Contig_3 1789006..1789253 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_478	UTR5_478	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_3 1785799..1785816 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_478	CDS_478	Tribonema minus UTEX_B_3156	CDS	Contig_3 1785817..1785911 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_478	UTR3_478	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_3 1789114..1789253 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_3:1785799..1789253+
coding sequence from alignment at Contig_3:1785799..1789253+

spliced messenger RNA

>mRNA_478 ID=mRNA_478|Name=jgi.p|Trimin1|55205|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=824bp|location=Sequence derived from alignment at Contig_3:1785799..1789253+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCTCAAGACAAAAGGAGCATGATGGTGCGGTGCGCAGCGCTCTGTGTGGC
GGGTCTCGTGACCGGGGTGACCTGCTTCGTCCCACTGGGCCCTGCCCTCT
CTACCGTGCGCAGATCTCCTTCATATGGCACCTGCACAAGAATGAGCGCT
TCGCTGACCGGTGACCCCATGCTGAAGCCCCTGGGTGCCGATGACTATAT
GGCAGTTGGACTGGCGCTTTGCTACGTCATGGGGGAGTCAAACAAGCCTG
AAGAGCAATATGTGTTTGAACCGCTGACGGCTGGCACTCTGGAGACCATT
CACCTTGGCGTGGAGACCTCTTACAAATGTGTCATGGGCCTCAAGGCCGG
GGACTACTTCATTGGCGACCCTTCAGCGCCCACGGGAGTCAATGTTGAAG
TTCTGTCGCCTCTGCTGCAGAATGGCGAAAACGCAATCCTCTGTGAAAAC
GCGGTGGAGCGCTCTCTGGCGGCGGCGCGTACCATGCGAAGGCGCAAGGA
GGGACAGCTGGTGGCGGTCGGCGCGACGCGCTCTAACTTCAACTTCCAGA
TCGTGCGAAAGCGCATTCTGAACCAGGTCTACGAGCCATCTTTTGCGGAC
AACGTGAAGCAGGACAAGTCCATTGACGTCTACGGGCGCGATGACGACAA
CGCTGCGGAAGTGGCAAAACTCGAGAACCTCTAGACGCAAGTACTCATTG
AGTGCTCGTGCTCAGAGCTTGCCTTCAACTCTTGTGTTCTGTACTTACCA
TTGGTGCATTTTTCCACTACAGCGCCTCGCTAATGGCACGGGCTAGACTT
TTTGTACCACAATTGTGCTTGTGA

protein sequence of jgi.p|Trimin1|55205

>Trimin1|55205|CE55204_792 ID=Trimin1|55205|CE55204_792|Name=jgi.p|Trimin1|55205|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
MMVRCAALCVAGLVTGVTCFVPLGPALSTVRRSPSYGTCTRMSASLTGDP
MLKPLGADDYMAVGLALCYVMGESNKPEEQYVFEPLTAGTLETIHLGVET
SYKCVMGLKAGDYFIGDPSAPTGVNVEVLSPLLQNGENAILCENAVERSL
AAARTMRRRKEGQLVAVGATRSNFNFQIVRKRILNQVYEPSFADNVKQDK
SIDVYGRDDDNAAEVAKLENL*

mRNA from alignment at Contig_3:1785799..1789253+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_478 ID=mRNA_478|Name=jgi.p|Trimin1|55205|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3455bp|location=Sequence derived from alignment at Contig_3:1785799..1789253+ (Tribonema minus UTEX_B_3156 )
TCTCAAGACAAAAGGAGCATGATGGTGCGGTGCGCAGCGCTCTGTGTGGC
GGGTCTCGTGACCGGGGTGACCTGCTTCGTCCCACTGGGCCCTGCCCTCT
CTACCGTGCGCAGGTCAGCCTTGAGTCCGCGCGATCATGAGAGCGGCTCG
ATTACAAATTTTGGATCCTGTGGCTAATCAGCTTCCACCGGCCACCTGAT
CGCATCTAGAGAGCTGGCCTGACTAGCCTAGTCACTTGCATAGATTTGTC
TAATCTCTCAAGGCTGCCAGACCTGTCCTTGACCCTTAGGTTGAAGTACG
CCGTATCCTTGCTGGGAAGAAGCCTAGTGCTGCCGAACCCAGCTCTGCCG
GCATAGTCGCAAGGCGTGACTGTGTCTCAGCCTCTACAACTTCATTTCGA
CACGCTCGCTCGTCTGGGTGTCTCCCTTTGATGTTTTGACGCCGCCACCT
TGTGTCACTCCTTCCATCAGATCTCCTTCATATGGCACCTGCACAAGAAT
GAGCGCTTCGCTGACCGGTGACCCCATGCTGAAGCCCCTGGGTGCCGATG
ACTATATGGCAGTTGGACTGGCGCTTTGCTACGTCATGGGGGAGTCAAAC
AAGCCTGAAGGTGCGATGTATTTGCAGTAAATTCTCTTGTGTCATCTGTG
GTTTGGCTTTTTGCCATGCATCTGTGTCACAGCATCTTCTTGGTCCATGG
CGTTTTTGACTAGCAACGTCAAACCATAAATTACTTGTGCGCCTCTTCTT
ACTCCTGCCACTTCATGAATGGGCAGGTCCCGGATTCGTCAACATAATTT
GCTTGGCCTCAATCACAAAGTTAACCATGTGTTCTTGACGCATAAGTACA
TTTTTCAGAAAACTCACTTGCATGCCAGTCACTACATGTTCAACACATCG
TTCATTCAATCATTCATGTCATTCATTCATAATTGCGGCTTCACGCGCGT
CCTGGCTTTCTCCTTCTGCTGAATGGTGATCACCAATGCAGCAATGCAAT
CGCCAATGCACGTGCCTGTGCTCGCACGATGTTGCTGTCTGCTGCAGAGC
AATATGTGTTTGAACCGCTGACGGCTGGCACTCTGGAGACCATTCACCTT
GGCGTGGAGACCTCTTACAAATGTGTCATGGGCCTCAAGGTGAGCGTCGC
ATGATTTGATTAGGGTTGGTCAATTGTTGAGATTTCATTTATGGTACGGA
GCAATTTTTGTATGTGCATGTTCACCACAAGTACAAGGTTTATCATAAGT
CCAGGTTTGGCAATTGCACGAGCAGAACGTGCACGTCCCGCCATCAGCTT
TAAGTCAGGGGTGTTAATTGATTAAACCATGACCAAAACACACAACAACA
TTGTCCATATCTTGCAGGTGTAGGCTTGCGCGTGAGTAGAGCCCAATGCC
CCCGCCCGCCTCATCATCTTTCACAACAGAACATGCAAGACGCCCAATGT
CGCCTCGAACGCACTTGTGGTGTTTGTTCTGCATCCTGCCAGCCAAGGCC
TTGCGACTGGGACAGTGAACGCCTGTGGCAGCAATCACTTCACTGCCATA
GCGTTCAGTCTGATGTGCCATAGTCGCACCAGTGTTGTCTGCAGAGCTGT
TTCTTGCCAACCAAATGCTTGCAGCTGCTGCTGCTGCAGCCACTGCCCCC
TGAGAAATTATCTGACATCAGCCTCTCAGATGCTCTCGAGAGAGGTGGCG
AGCAGCAAGCTTGGCGGTATGTGTTGGTTACAGACGTGTATGTTGCATGC
TCTTTCTGCTCACAGCTCAGGTTCAAGGCAATCTCCAAAGGTCTGCTTAA
CGCCATGCTTTTGATACCAACGTGCTTGATTCAAGGCTGTGGGCTCGCTA
AAATGGTTTCATTGTTGATCATCTCCCTCGCGACCGTTGCATGCAGGCCG
GGGACTACTTCATTGGCGACCCTTCAGCGCCCACGGGAGTCAATGTTGAA
GTTCTGTCGCCTCTGCTGCAGAATGGCGAAAACGCAATCGTAAGTAATTT
CTTACTAGTGTACCCTCACCGCAACGCCGCACTTGTTTTGAGTGTTTGGA
ACCAGAAGCTTGCTGCTTTGAACCACCAGAAGCTTGCTGCTTCGCAAGCA
ACTTAGTGATGCCTTGCCTGTCTGAAGCATGCATCCAAGCAATCCTGTGC
TGCATGTGGTGCAGATAACTTTGGCATGCACTGCATCCTAAAACTCAAGT
TTCTACCATCCAATGTGCTAATGATGTCCACACATAAGGTAACTGTGAGT
GATGAGTAATGTGTCATGTCAGCAGCGGTACATATGGGCACCAGTGTAGA
GTGTCGAACAGCAATATTATGAATGTATATCCTAGCTAATGACAGCTACA
TAAGCGTGCTTGTGACAACTTTTGTAATTCGTGCAAGCATTTATCACAAA
CACACCTCATCGATGTGCAGTTTTCTGACAGTTCATCTGGCGCAACACAT
GTGATCCGCAACTGCTTTGCTACACCATCTCTGAACCACTGCGTGGAGGT
GTTTTGGCGACGTCATACAGCATCAGGCTCAGCAAGCGTTGCTGAAGTGC
TTGCCATCTGCCTTGTGTTGTTGCAGCTCTGTGAAAACGCGGTGGAGCGC
TCTCTGGCGGCGGCGCGTACCATGCGAAGGCGCAAGGAGGGACAGCTGGT
GGCGGTCGGCGCGACGCGCTCTAACTTCAACTTCCAGATCGTGCGAAAGC
GCATTCTGAACCAGGTGAAGAGGGGGCTCAAATCTCATCATCATGCGATT
CCAGAGCCTGCATGCATGCTTCATAATTACTTGGCACACAGTGTCTCATA
ATGCAATTGGTTCAATGCACTGCAGCAACTTCCAGGTTGAACGAAAGCAC
GTCACAGATCATAATGACACAAGGCACAGAAGGCAACTCAGAGTGCGCGT
GGAGGATTCTGCAGCACTATGAAGCCTATATATCAATGAAGTAGTGCACT
CATGCTTGCAATGTGCTCACAAGGTTTGCTGAGGATGCACGTAATGAACC
GTCGCGCATGCAGGATGTTGCATGGCCATTGACCGTCGTGAAGCCTGCGC
TGTGATACTGTCAATTCAGGATGTTGCATGGCCATTGACCATTGTGCTGC
GATACTGTCACCTCTACTCCAGAGCACGATGTTTCTGCGCGCTCTTTTGT
CAATCCTCTTTCACTCACTCCTCACAAGTACGCTGCATCAATGCCCTTGT
GGTGCAGGTCTACGAGCCATCTTTTGCGGACAACGTGAAGCAGGACAAGT
CCATTGACGTCTACGGGCGCGATGACGACAACGCTGCGGAAGTGGCAAAA
CTCGAGAACCTCTAGACGCAAGTACTCATTGAGTGCTCGTGCTCAGAGCT
TGCCTTCAACTCTTGTGTTCTGTACTTACCATTGGTGCATTTTTCCACTA
CAGCGCCTCGCTAATGGCACGGGCTAGACTTTTTGTACCACAATTGTGCT
TGTGA

Coding sequence (CDS) from alignment at Contig_3:1785799..1789253+

>mRNA_478 ID=mRNA_478|Name=jgi.p|Trimin1|55205|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=666bp|location=Sequence derived from alignment at Contig_3:1785799..1789253+ (Tribonema minus UTEX_B_3156 )
ATGATGGTGCGGTGCGCAGCGCTCTGTGTGGCGGGTCTCGTGACCGGGGT
GACCTGCTTCGTCCCACTGGGCCCTGCCCTCTCTACCGTGCGCAGATCTC
CTTCATATGGCACCTGCACAAGAATGAGCGCTTCGCTGACCGGTGACCCC
ATGCTGAAGCCCCTGGGTGCCGATGACTATATGGCAGTTGGACTGGCGCT
TTGCTACGTCATGGGGGAGTCAAACAAGCCTGAAGAGCAATATGTGTTTG
AACCGCTGACGGCTGGCACTCTGGAGACCATTCACCTTGGCGTGGAGACC
TCTTACAAATGTGTCATGGGCCTCAAGGCCGGGGACTACTTCATTGGCGA
CCCTTCAGCGCCCACGGGAGTCAATGTTGAAGTTCTGTCGCCTCTGCTGC
AGAATGGCGAAAACGCAATCCTCTGTGAAAACGCGGTGGAGCGCTCTCTG
GCGGCGGCGCGTACCATGCGAAGGCGCAAGGAGGGACAGCTGGTGGCGGT
CGGCGCGACGCGCTCTAACTTCAACTTCCAGATCGTGCGAAAGCGCATTC
TGAACCAGGTCTACGAGCCATCTTTTGCGGACAACGTGAAGCAGGACAAG
TCCATTGACGTCTACGGGCGCGATGACGACAACGCTGCGGAAGTGGCAAA
ACTCGAGAACCTCTAG