Trimin1|348670|estExt_Genemark1.C_Ctg_290127 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348670
Unique NameTrimin1|348670|estExt_Genemark1.C_Ctg_290127
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length243
Homology
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A835Z1R2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R2_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 2.980e-137
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query:    1 MSGPLSAAALDAARQELLQQEMEFCATLPTLQQPSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEVGAVHLRTVIG 242
            MSGPLSAAALDAARQELLQQEMEFCATLPTLQQPSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEVGAVHLRTVIG
Sbjct:    1 MSGPLSAAALDAARQELLQQEMEFCATLPTLQQPSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEVGAVHLRTVIG 242          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A7S4T7K3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7K3_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 8.150e-12
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 0
Query:   20 QEMEFCATLPT-LQQPSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            +E+ +   LP+   Q +F  GRLA+R ALLA  H  S         AL A +A   A  ILK E G P +P  V+GSI+HK +  VA+VS+      G+ +                   D  + C      ++  RILT  E  ++                              G+T E++VLLRFS+KES+YKA+ P + +Y+GF+EAE+
Sbjct:  146 KEVAYAMNLPSQTSQDTFFVGRLAMRHALLAS-HTSSFA-------ALPAVSADDAA--ILKDEHGRPTMPKGVLGSITHKKKTGVALVSSASTRRRGVGV-------------------DLEQTCT--GRRSIARRILTEGEILNL--------------------------GCVEGVTKEEEVLLRFSLKESVYKAMHPLLNQYIGFKEAEI 302          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A7W1B837_9DELT (Enterobactin synthase component D n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W1B837_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 1.340e-7
Identity = 56/177 (31.64%), Postives = 80/177 (45.20%), Query Frame = 0
Query:   77 PILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGT---IGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQ---VLLRFSVKESLYKALSPRVRRYVGFREAEV-----GAVHLRTVIG 242
            P+ K + G P+ P+  +GSISHKA  AVA+V+   D T   +G+D+E           R  RT  D +             RILT  E                               +AL   A ++   VLLRFS+KE++YKA+ P +RRYVGF+E E+     G  H+ + +G
Sbjct:   71 PLPKDDRGAPVTPAGWLGSISHKAGHAVALVAPA-DATGARVGVDLE-----------RTDRTRVDIAR------------RILTPREL------------------------------AALPTAASERFRAVLLRFSIKEAIYKAIDPFLRRYVGFQEVELAIADDGTAHVTSALG 193          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A4P5W281_9DELT (Enterobactin synthase component D n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5W281_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 4.000e-7
Identity = 60/201 (29.85%), Postives = 84/201 (41.79%), Query Frame = 0
Query:   34 PSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAAL--RAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGSTTNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            P  LA      R        Y      GG  ALA A   L  R  P+L  E G P+LP  +VGSI+HK  +AVA+V+    G +G+D+E+            +R     +E            R+LT  E E++                           + +        ++RFSVKES+YKA+ P ++RYVGF E EV
Sbjct:   37 PEILARLTGAERTHAEALRGYRQVQFVGGRLALAVAFGELGTRRAPVLTDEHGAPILPEGLVGSITHKQDLAVALVARGRVG-VGVDLEET-----------TRPRPGVAE------------RVLTPRELEAV--------------------------RTLVPSRQWVDTVVRFSVKESVYKAIHPTLQRYVGFGEVEV 187          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: K0RCE5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RCE5_THAOC)

HSP 1 Score: 58.2 bits (139), Expect = 3.380e-6
Identity = 59/212 (27.83%), Postives = 92/212 (43.40%), Query Frame = 0
Query:   35 SFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAV------------VSTCCDGTIGIDIEDVGGGAXXXXXRHSRTDADASELCAVGST--TNLGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            S+  GR A+R +L +      GC  +     L    +A+R+ P  K   G P+LP  V+GSISHK   AV +            VS   D  + +D ED    A      + +T     +L  +     + +  ++LT  E   + G                          ++G++  Q+V+LRFS+KES YKA+ P +  YV F+EAE+
Sbjct:  155 SYYMGRAALRSSLESLIVDQLGCEPE-----LQRLRSAVRSEPFNKDSFGRPILPVGVMGSISHKNDYAVGLSSMRPNVNVSDEVSWLADCPV-LDTEDESSTADIAGNSNRQTRGIGIDLERINDDRGSRIQHKVLTEWELSHLGGL------------------------ESIGISKAQEVMLRFSLKESAYKAMHPIICEYVSFKEAEI 336          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A7S3PAQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAQ3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.270e-5
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  196 GLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV-----GAVHL 237
            G+ AE++VLLRFS+KE+LYKA+ P + +YVGF+EAEV     G VH+
Sbjct:  110 GILAEEEVLLRFSLKEALYKAMHPLICQYVGFQEAEVQPLANGTVHV 156          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A2W4IZ52_9PROT (Enterobactin synthase component D n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4IZ52_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 2.520e-5
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 0
Query:   17 LLQQEMEFCATLPTLQQPSFLAGRLAVRRALLAQQHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKARIAVAVVSTCCDGTIGIDIEDVG 123
            L ++E  F   L   ++  ++ GRLA+RRA                     AAA  L  GP+L +  G P+LP  VV SISHK R+A A+V+   + T+G+D+E++G
Sbjct:   44 LHEKERVFALALRGRRRIEWVGGRLALRRA---------------------AAARGLELGPVLPSASGAPVLPPGVVASISHKRRLAAALVAEG-EATLGVDLEELG 128          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A4D9CTH4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTH4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.660e-5
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 0
Query:  142 ELCAVGSTTN-LGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            E+C    +TN +  R+LT  E++ + G                         ++LG++ E ++LLRFS+KES+YKA+ P +RRYV F+EAEV
Sbjct:  186 EICQPRPSTNSIATRVLTRREQDELGGL------------------------ASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEV 253          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: W7TPT1_9STRA (4-phosphopantetheinyl transferase entd n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 3.280e-5
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 0
Query:  142 ELCAVGSTTN-LGLRILTAAERESICGSXXXXXXXXXXXXXXXXXXXXXXXESALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            E+C    +TN +  R+LT  E++ + G                         ++LG++ E ++LLRFS+KES+YKA+ P +RRYV F+EAEV
Sbjct:  270 EICQPRPSTNSIATRVLTRREQDELGGL------------------------ASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEV 337          
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Match: A0A7S2FXC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXC9_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.600e-5
Identity = 21/40 (52.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:  193 SALGLTAEQQVLLRFSVKESLYKALSPRVRRYVGFREAEV 232
            + LG++ +Q+VL+ FSVKE++YKA+ P + RYVGF+E E+
Sbjct:   51 AGLGISLDQEVLVYFSVKEAVYKAIDPYLERYVGFKEVEI 90          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348670 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835Z1R2_9STRA2.980e-137100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4T7K3_9STRA8.150e-1231.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7W1B837_9DELT1.340e-731.64Enterobactin synthase component D n=1 Tax=Deltapro... [more]
A0A4P5W281_9DELT4.000e-729.85Enterobactin synthase component D n=1 Tax=Deltapro... [more]
K0RCE5_THAOC3.380e-627.83Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3PAQ3_9STRA1.270e-557.45Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A2W4IZ52_9PROT2.520e-535.51Enterobactin synthase component D n=1 Tax=Proteoba... [more]
A0A4D9CTH4_9STRA2.660e-535.87Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPT1_9STRA3.280e-535.874-phosphopantetheinyl transferase entd n=1 Tax=Nan... [more]
A0A7S2FXC9_9STRA3.600e-552.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0413544'-phosphopantetheinyl transferase, N-terminal domainPFAMPF178374PPT_Ncoord: 33..108
e-value: 1.7E-8
score: 34.4
IPR0082784'-phosphopantetheinyl transferase domainPFAMPF01648ACPScoord: 115..232
e-value: 3.7E-8
score: 33.5
IPR0371434'-phosphopantetheinyl transferase domain superfamilyGENE3D3.90.470.20coord: 114..239
e-value: 2.2E-5
score: 26.5
IPR0371434'-phosphopantetheinyl transferase domain superfamilySUPERFAMILY562144'-phosphopantetheinyl transferasecoord: 201..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..192
IPR003542Enterobactin synthetase-like, component DPANTHERPTHR38096ENTEROBACTIN SYNTHASE COMPONENT Dcoord: 73..122
coord: 196..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_29contigContig_29:1066731..1070485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348670mRNA_9627Tribonema minus UTEX_B_3156 mRNAContig_29 1066731..1070641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348670|estExt_Genemark1.C_Ctg_290127 ID=Trimin1|348670|estExt_Genemark1.C_Ctg_290127|Name=jgi.p|Trimin1|348670|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=243bp
MSGPLSAAALDAARQELLQQEMEFCATLPTLQQPSFLAGRLAVRRALLAQ
QHRYSGCSGDGGGEALAAAAAALRAGPILKAEGGGPLLPSCVVGSISHKA
RIAVAVVSTCCDGTIGIDIEDVGGGAARRRRRHSRTDADASELCAVGSTT
NLGLRILTAAERESICGSGDGDGGGGGSGSGGSGGGGDGSGESALGLTAE
QQVLLRFSVKESLYKALSPRVRRYVGFREAEVGAVHLRTVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0413544PPT_N
IPR0082784-PPantetheinyl_Trfase_dom
IPR0371434-PPantetheinyl_Trfase_dom_sf
IPR003542Enbac_synth_compD-like