Trimin1|348649|estExt_Genemark1.C_Ctg_290024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348649
Unique NameTrimin1|348649|estExt_Genemark1.C_Ctg_290024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length53
Homology
BLAST of jgi.p|Trimin1|348649 vs. uniprot
Match: A0A836CED5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.200e-33
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 MPCNADLAGCRERLHGFASNGPAGIEKFWTIINGYFNELLSYICGTGMTSSA 52
            MPCNADLAGCRERLHGFASNGPAGIEKFWTIINGYFNELLSYICGTGMTSSA
Sbjct:    1 MPCNADLAGCRERLHGFASNGPAGIEKFWTIINGYFNELLSYICGTGMTSSA 52          
BLAST of jgi.p|Trimin1|348649 vs. uniprot
Match: A0A835YYD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.600e-14
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    5 ADLAGCRERLHGFASNGPAGIEKFWTIINGYFNELLSYICGTG 47
            AD++G    +  FAS+GPAGIEKFWTIINGYFNELLSYI GTG
Sbjct:    1 ADVSGFTACMERFASHGPAGIEKFWTIINGYFNELLSYIRGTG 43          
BLAST of jgi.p|Trimin1|348649 vs. uniprot
Match: A0A835ZDK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.560e-8
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0
Query:   14 LHGFASNGPAGIEKFWTIINGYFNELLSYICGTG 47
            +  FASN PAGIEKF TIINGY NELLSYI GTG
Sbjct:    1 MERFASNRPAGIEKFRTIINGYLNELLSYIRGTG 34          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348649 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CED5_9STRA2.200e-33100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYD2_9STRA1.600e-1474.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDK8_9STRA4.560e-879.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_29contigContig_29:150136..151126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348649mRNA_9554Tribonema minus UTEX_B_3156 mRNAContig_29 150098..151126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348649|estExt_Genemark1.C_Ctg_290024 ID=Trimin1|348649|estExt_Genemark1.C_Ctg_290024|Name=jgi.p|Trimin1|348649|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=53bp
MPCNADLAGCRERLHGFASNGPAGIEKFWTIINGYFNELLSYICGTGMTS
SA*
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