Trimin1|348629|estExt_Genemark1.C_Ctg_280078 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348629
Unique NameTrimin1|348629|estExt_Genemark1.C_Ctg_280078
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length391
Homology
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BLAST of jgi.p|Trimin1|348629 vs. uniprot
Match: A0A835YZC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC7_9STRA)

HSP 1 Score: 779 bits (2012), Expect = 1.090e-284
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0 
Query:    1 MEVHSKEQLETQQPLRVRAALSVPLFGAFLMWLLEWAVLRACPSITYFARTLEQPETRFGQVFAARGVGYLLGSLASGHSAQCVGGLRFIVIGPSEGDGGGESQPPVDEFEGGLLELAAEQDGQAKDDSAPPGLAPMPTLLQVLLCAFFFCYTGLEVGFGGWLPVVMTLQGVDEAHGAYTATMFWLGVTVGRIAAIPLAALFSVSVLLQGLLADTGALGMVALFAACVALARAAASRHNGTSNDQHLRDSASGGEAGAGLGVHHQVEYRYTLGFCRLLCNLGMPEDVLSRVCTLTPEGGSADWCIDICTAGVLECAWVSAKYTTYSFRIGVLLGLHMADAGAGAVGAEPGESEPEVPLSIKPLVDPITNIMVKPKSVRLWGHWPSTAVAD 390
            MEVHSKEQLETQQPLRVRAALSVPLFGAFLMWLLEWAVLRACPSITYFARTLEQPETRFGQVFAARGVGYLLGSLASGHSAQCVGGLRFIVIGPSEGDGGGESQPPVDEFEGGLLELAAEQDGQAKDDSAPPGLAPMPTLLQVLLCAFFFCYTGLEVGFGGWLPVVMTLQGVDEAHGAYTATMFWLGVTVGRIAAIPLAALFSVSVLLQGLLADTGALGMVALFAACVALARAAASRHNGTSNDQHLRDSASGGEAGAGLGVHHQVEYRYTLGFCRLLCNLGMPEDVLSRVCTLTPEGGSADWCIDICTAGVLECAWVSAKYTTYSFRIGVLLGLHMADAGAGAVGAEPGESEPEVPLSIKPLVDPITNIMVKPKSVRLWGHWPSTAVAD
Sbjct:    1 MEVHSKEQLETQQPLRVRAALSVPLFGAFLMWLLEWAVLRACPSITYFARTLEQPETRFGQVFAARGVGYLLGSLASGHSAQCVGGLRFIVIGPSEGDGGGESQPPVDEFEGGLLELAAEQDGQAKDDSAPPGLAPMPTLLQVLLCAFFFCYTGLEVGFGGWLPVVMTLQGVDEAHGAYTATMFWLGVTVGRIAAIPLAALFSVSVLLQGLLADTGALGMVALFAACVALARAAASRHNGTSNDQHLRDSASGGEAGAGLGVHHQVEYRYTLGFCRLLCNLGMPEDVLSRVCTLTPEGGSADWCIDICTAGVLECAWVSAKYTTYSFRIGVLLGLHMADAGAGAVGAEPGESEPEVPLSIKPLVDPITNIMVKPKSVRLWGHWPSTAVAD 390
[Close]
BLAST of jgi.p|Trimin1|348629 vs. uniprot
Match: A0A835ZAY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.480e-5
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 0 
Query:  258 AGLGVHHQVEYRYTLGFCRLLCNLGMPEDVLSRVCTLTPEGGSADWCID 306
            AGL    ++E+ YTL F +LL  LGMP + LS+V  L PEG SADW ID
Sbjct:  213 AGLAPLVKIEHNYTLAFYKLLLELGMPPEALSKVVQLMPEGCSADWLID 261
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348629 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YZC7_9STRA1.090e-284100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAY6_9STRA5.480e-555.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23121SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1coord: 136..210
NoneNo IPR availablePANTHERPTHR23121:SF9SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1coord: 136..210
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 143..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_28contigContig_28:810298..822653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348629mRNA_9025Tribonema minus UTEX_B_3156 mRNAContig_28 810298..822653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348629|estExt_Genemark1.C_Ctg_280078 ID=Trimin1|348629|estExt_Genemark1.C_Ctg_280078|Name=jgi.p|Trimin1|348629|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=391bp
MEVHSKEQLETQQPLRVRAALSVPLFGAFLMWLLEWAVLRACPSITYFAR
TLEQPETRFGQVFAARGVGYLLGSLASGHSAQCVGGLRFIVIGPSEGDGG
GESQPPVDEFEGGLLELAAEQDGQAKDDSAPPGLAPMPTLLQVLLCAFFF
CYTGLEVGFGGWLPVVMTLQGVDEAHGAYTATMFWLGVTVGRIAAIPLAA
LFSVSVLLQGLLADTGALGMVALFAACVALARAAASRHNGTSNDQHLRDS
ASGGEAGAGLGVHHQVEYRYTLGFCRLLCNLGMPEDVLSRVCTLTPEGGS
ADWCIDICTAGVLECAWVSAKYTTYSFRIGVLLGLHMADAGAGAVGAEPG
ESEPEVPLSIKPLVDPITNIMVKPKSVRLWGHWPSTAVAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf