Trimin1|348584|estExt_Genemark1.C_Ctg_270074 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348584
Unique NameTrimin1|348584|estExt_Genemark1.C_Ctg_270074
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length214
Homology
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A836CHB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB6_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 3.210e-145
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVASIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQIFAENTYWKRDQDLMEEAIRTADLYCGTAKEHRWNCLCFNTTFTFGVLSLTLKLQLQSAHCASRRCRGRRKVQWRAARAGRWSRGACKRAVSACASVARQLTAVAAAAFGSAGRGAVAFF 213
            MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVASIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQIFAENTYWKRDQDLMEEAIRTADLYCGTAKEHRWNCLCFNTTFTFGVLSLTLKLQLQSAHCASRRCRGRRKVQWRAARAGRWSRGACKRAVSACASVARQLTAVAAAAFGSAGRGAVAFF
Sbjct:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVASIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQIFAENTYWKRDQDLMEEAIRTADLYCGTAKEHRWNCLCFNTTFTFGVLSLTLKLQLQSAHCASRRCRGRRKVQWRAARAGRWSRGACKRAVSACASVARQLTAVAAAAFGSAGRGAVAFF 213          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A835YN01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN01_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.810e-35
Identity = 97/234 (41.45%), Postives = 103/234 (44.02%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVAS-----------------------------------------------IAFGDL-----------VRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQ-----------------------------------------------------------IFAENTYWKRDQDLMEEAIRTADL 117
            M+LAD PAAIRIDLASGMGS LDVIRLVNPEIPSNQAS  FKRLATELPDVAS                                               +  GD+             +  +PPAHDDGALIVARPMSEDDPSV TPLAQ                                                           IFAENTYWKRDQDLMEEAI T  +
Sbjct:    1 MELADTPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASFTFKRLATELPDVASSCRQLRIYGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEPPAHDDGALIVARPMSEDDPSVPTPLAQVAHQGPEISMHSVAAEMGVRIKAGTECLIGKKVKALYAIKYGTAAAAAIPKRNIPFRGQIFAENTYWKRDQDLMEEAIHTVTM 234          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A835Z1W0_9STRA (Uncharacterized protein n=8 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.710e-31
Identity = 110/324 (33.95%), Postives = 112/324 (34.57%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVAS----------------------------------------------------------------------------------------------------------------------------------------------------IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQI-----------------------------------------------------------FAENTYWKRDQDLMEEAIRTADL 117
            M+LADIPAAIRIDLASGMGS LDVIRLVNPEIPSNQASS FKRLA ELPDVAS                                                                                                                                                    IAFGDLVRRVVQPPAHD GALIVARPMSEDDPSVATPLAQ+                                                           FAENTYWKRDQDLMEEAIRTA L
Sbjct:    1 MELADIPAAIRIDLASGMGSVLDVIRLVNPEIPSNQASSTFKRLALELPDVASSCRQLRINGNGKLTPCADARTLVEIVWSLPGKPARAFRRTSATTVCRVLGGDVSLVNEIEGRCRALQATEVGRAAQDFLIGDGSVQVSRELPAELQLATPEQRTLFVASWMHERRLALIDREKTQQLALIKNGFDLLGSFGVADARDRIAFGDLVRRVVQPPAHDAGALIVARPMSEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRIKAGTECLIGKKVKALYAIKYGTAAAAAIPKRNVPFRGKVFAENTYWKRDQDLMEEAIRTATL 324          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A835ZAN0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.260e-30
Identity = 103/290 (35.52%), Postives = 110/290 (37.93%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVAS------------------------------------------------------------------------------------------------------------------IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLA-----------------------------------------------------------QIFAENTYWKRDQDLMEEAIRTADL 117
            ++LADIPAAIRI+LASGMGS LDVIRLVNPEIPSNQASS FKR+ATELPD+AS                                                                                                                  IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATP A                                                           QIFAENTYWKR+QD MEEAI T  +
Sbjct:  133 LELADIPAAIRINLASGMGSVLDVIRLVNPEIPSNQASSTFKRVATELPDMASSCCQLRINGNGKLTPCADARTLVEIVGSLPGKPARAFRRTSATTVCRVLGGDVSLVDEIEGRCRALQATEMGRAAQDFLIGDGSDQVSRDLPAELQLATPEQRTFFGVADARDRIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPSAHVAHRGPEISMQSVAAEMGVRIKAGTECLIGKKVKALYAIKYGTAAAAAIPKRNITFRGQIFAENTYWKRNQDHMEEAISTVTM 422          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A836CBT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.480e-22
Identity = 64/119 (53.78%), Postives = 65/119 (54.62%), Query Frame = 0
Query:   54 IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQ---------------------------------------IFAENTYWKRDQDLMEEAIRTADLY--CGTAKEHRWNCLC 131
            IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQ                                       I AENTYWKRDQDLMEEAIRT  +   C T       C C
Sbjct:  139 IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRIKAGTVFDREEGEGFVHHQICAENTYWKRDQDLMEEAIRTVTMLNRCDTTSADCRLCQC 257          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A836CN02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN02_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.520e-21
Identity = 59/123 (47.97%), Postives = 61/123 (49.59%), Query Frame = 0
Query:   54 IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQI-----------------------------------------------------------FAENTYWKRDQDLMEEAIRTADL 117
            IAFGDLVRRVVQPPAHDDGALIVARPM EDDPSVATPLAQ+                                                           FAENTYWKRDQDLMEEAIRT  +
Sbjct:   39 IAFGDLVRRVVQPPAHDDGALIVARPMCEDDPSVATPLAQVAHRGPEISMHSVAAEMGVRIKAGSECLIGKKVKALYAIKYGTAAAAAIPKRNVPFRGKVFAENTYWKRDQDLMEEAIRTVTM 161          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A836CKR7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.030e-20
Identity = 80/242 (33.06%), Postives = 84/242 (34.71%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVAS----------------------------------------------------------------------------------------------------------------------------------------------------IAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQI 94
            M+L DIP AIRIDLAS MGS LDVIRLVNPE PSNQ  S FKRLATELPDVAS                                                                                                                                                    +AFGDL RRVVQPPAHDD ALIVARPMSEDDP+VATPLAQ+
Sbjct:    1 MELVDIPTAIRIDLASNMGSVLDVIRLVNPETPSNQVPSTFKRLATELPDVASSCCQLRMNRNGKLTPCADARTLVQNVWSLPGKPACAFRRTSATTVCRIVGGDVSLVDEIEGRCRALQATEVGRAARDFLIGDGGVQVSRELPPELQLGTREQRTLCVANWMHERRLALIDHEKTQQLALIKNGFDLVGSFGVADARDRMAFGDLARRVVQPPAHDDSALIVARPMSEDDPTVATPLAQV 242          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A835YYW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.090e-10
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    1 MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPDVAS 53
            MD+AD   +IR+D AS  GS +DVIRLV P +PSNQAS+ F RLA+E+PDVAS
Sbjct:    1 MDVADFTTSIRVDSASNKGSVIDVIRLVIPNLPSNQASTTFARLASEMPDVAS 53          
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Match: A0A835YU65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU65_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.450e-5
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0
Query:  115 ADLYCGTAKEHRWNCLCFNTTFTFGVLSLTLKLQLQ 150
            ADL+ GTA E R +CLC+NTTFTFGVLS T  L+LQ
Sbjct:   26 ADLHAGTANERRCHCLCYNTTFTFGVLSRTATLKLQ 61          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348584 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A836CHB6_9STRA3.210e-145100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN01_9STRA1.810e-3541.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z1W0_9STRA3.710e-3133.95Uncharacterized protein n=8 Tax=Tribonema minus Ta... [more]
A0A835ZAN0_9STRA3.260e-3035.52Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CBT4_9STRA2.480e-2253.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN02_9STRA1.520e-2147.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKR7_9STRA1.030e-2033.06Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YYW8_9STRA2.090e-1064.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU65_9STRA1.450e-569.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:681634..688763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348584mRNA_6952Tribonema minus UTEX_B_3156 mRNAContig_27 681634..691256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348584|estExt_Genemark1.C_Ctg_270074 ID=Trimin1|348584|estExt_Genemark1.C_Ctg_270074|Name=jgi.p|Trimin1|348584|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=214bp
MDLADIPAAIRIDLASGMGSGLDVIRLVNPEIPSNQASSAFKRLATELPD
VASIAFGDLVRRVVQPPAHDDGALIVARPMSEDDPSVATPLAQIFAENTY
WKRDQDLMEEAIRTADLYCGTAKEHRWNCLCFNTTFTFGVLSLTLKLQLQ
SAHCASRRCRGRRKVQWRAARAGRWSRGACKRAVSACASVARQLTAVAAA
AFGSAGRGAVAFF*
back to top