Trimin1|348569|estExt_Genemark1.C_Ctg_270043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348569
Unique NameTrimin1|348569|estExt_Genemark1.C_Ctg_270043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length367
Homology
BLAST of jgi.p|Trimin1|348569 vs. uniprot
Match: A0A836CEP7_9STRA (Centrosomal protein POC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEP7_9STRA)

HSP 1 Score: 655 bits (1691), Expect = 1.400e-236
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MDLDAALEKLKLAGDAAAGQEFEYAFPSSSEGQGDREGLDDFEADSLNGSRYRTEAATPTATAFQDEEGHSMSDTILRVASGQDEDINELAAALRTQFREHVLRTAVDNVVNMKMRMLSDAEAAHARAEAVRAAEAXXXXXREELLLQETRRLQAALEAEQAKRGAMAGKLGTLHLGVLQRARLSCAYQAWRDEMAARRERIRRVTLGFQRTQAALEKRAFLWWRNAARREGVARARAEAAAQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRASAPPPPPALSPPARAPATPSRGDVLGGASPGGVRVVASATDMYPRRHGPPPPYHR 366
            MDLDAALEKLKLAGDAAAGQEFEYAFPSSSEGQGDREGLDDFEADSLNGSRYRTEAATPTATAFQDEEGHSMSDTILRVASGQDEDINELAAALRTQFREHVLRTAVDNVVNMKMRMLSDAEAAHARAEAVRAAEAXXXXXREELLLQETRRLQAALEAEQAKRGAMAGKLGTLHLGVLQRARLSCAYQAWRDEMAARRERIRRVTLGFQRTQAALEKRAFLWWRNAARREGVARARAEAAAQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRASAPPPPPALSPPARAPATPSRGDVLGGASPGGVRVVASATDMYPRRHGPPPPYHR
Sbjct:    1 MDLDAALEKLKLAGDAAAGQEFEYAFPSSSEGQGDREGLDDFEADSLNGSRYRTEAATPTATAFQDEEGHSMSDTILRVASGQDEDINELAAALRTQFREHVLRTAVDNVVNMKMRMLSDAEAAHARAEAVRAAEAXXXXXREELLLQETRRLQAALEAEQAKRGAMAGKLGTLHLGVLQRARLSCAYQAWRDEMAARRERIRRVTLGFQRTQAALEKRAFLWWRNAARREGVARARAEAAAQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRASAPPPPPALSPPARAPATPSRGDVLGGASPGGVRVVASATDMYPRRHGPPPPYHR 366          
BLAST of jgi.p|Trimin1|348569 vs. uniprot
Match: A0A835YXP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.010e-35
Identity = 141/386 (36.53%), Postives = 174/386 (45.08%), Query Frame = 0
Query:   68 EGHSMSDTILRVASGQDE-----------DINELAAALRTQFREHVLRTAVDNVVNMKMRMLSDAEAAHARAEAVRAAEAXXXXXREELLLQETRRLQAAL-------------------------------------------EAEQAKRGAMAGKLGTLHLGVLQRARLSCAYQA----------WRDEMAARRERIRRVTLGFQRTQAALEKRAF---------------------------LWWRNAARREGVARARAEAAAQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRASAPPPPPALSPPARAPATPSRGDVLGGASPGGVRVVASATDMY---PRRHG 359
            EG S++++I+RV SGQDE           D++ L AALR QFR+ +LR AVD +VN+K+RMLS+A+AA  R EAVRAAEA       E L +E   +  AL                                            A+Q       GK  TL   + Q   L   Y +          WR   AA R     V      T+  L++RA                              WR A R +  A  R EAAAQLKAVT  IV RYE  LA MA +LAAA A+A  ERARG KLE+DLRRALLRGMT+MNMEALG+F +  ++ P P          P TPS+       S    R  A+AT      P RHG
Sbjct:   88 EGISIAESIVRVTSGQDEVGTAPMMGTAPDVDTLTAALREQFRQGLLRAAVDGLVNVKVRMLSEAQAAVTRLEAVRAAEAAEAAALSERLQREIDDVGGALVAAXXXXXXXXXXXXXXXXXXXASVVVSWSGPFVSGWLRRGYGSAQQRAAAPSGGKGATLSAKLAQEHLLRVNYNSGGTAQPPSARWRANAAAFRRERANVRAALLTTRCLLQRRAMQRYVTTISVCYVSAARHAEVHRYDKRVFRWRAAVRLQHAASLRTEAAAQLKAVTGDIVTRYEERLADMATELAAAHATAAAERARGQKLEEDLRRALLRGMTLMNMEALGIFGEKHSAMPAP-------ISTPPTPSQQQC----STAAARSSAAATSTRGASPMRHG 462          
BLAST of jgi.p|Trimin1|348569 vs. uniprot
Match: A0A7S4D5K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5K4_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 6.080e-5
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  242 AQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRA 311
            A+L  VT +++ RYEA L  MA DL  A+     E+ R  ++E++ R+A+L+G+T MN+ A+G+F D RA
Sbjct:   27 AKLGRVTRELIGRYEAELRRMAADLGHARDLVRGEQRRRRQMEEEFRQAILKGITAMNVGAIGLFGDQRA 96          
BLAST of jgi.p|Trimin1|348569 vs. uniprot
Match: A0A3Q3G6H9_9LABR (Centrosomal protein POC5 n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3G6H9_9LABR)

HSP 1 Score: 55.8 bits (133), Expect = 7.520e-5
Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 0
Query:  187 AYQAWRDEMAARRERIRRVTLGFQRTQAALEKRAFLWWRNAARREGVARARAEAAAQLKAVTSKIVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNMEALGVFHDNRASAPPPP 317
            A+  WR + A  +E         Q     L+K+ +L W +  ++           A+ + V +++ A YEA LA   + +  AQA   R R    + E+ +++A +RG+  +N+EALG+FH       PPP
Sbjct:  265 AFTHWRLQHAEAKEEAHAAQAAQQHYNMQLKKKVWLGWHSLLQKHWKVNLERACRARAEEVCTRLSAEYEAKLAEHCDAIEKAQAEIQRLRLERERYEESMKKAFMRGVCALNIEALGMFHSTEGRPEPPP 395          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348569 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CEP7_9STRA1.400e-236100.00Centrosomal protein POC5 n=1 Tax=Tribonema minus T... [more]
A0A835YXP7_9STRA1.010e-3536.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D5K4_HETAK6.080e-542.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3Q3G6H9_9LABR7.520e-528.24Centrosomal protein POC5 n=2 Tax=Labrus bergylta T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableCOILSCoilCoilcoord: 131..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..325
IPR033351Centrosomal protein POC5PANTHERPTHR28618CENTROSOMAL PROTEIN POC5coord: 64..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:381230..384941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348569mRNA_6920Tribonema minus UTEX_B_3156 mRNAContig_27 381230..384941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348569|estExt_Genemark1.C_Ctg_270043 ID=Trimin1|348569|estExt_Genemark1.C_Ctg_270043|Name=jgi.p|Trimin1|348569|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=367bp
MDLDAALEKLKLAGDAAAGQEFEYAFPSSSEGQGDREGLDDFEADSLNGS
RYRTEAATPTATAFQDEEGHSMSDTILRVASGQDEDINELAAALRTQFRE
HVLRTAVDNVVNMKMRMLSDAEAAHARAEAVRAAEAAAAAAREELLLQET
RRLQAALEAEQAKRGAMAGKLGTLHLGVLQRARLSCAYQAWRDEMAARRE
RIRRVTLGFQRTQAALEKRAFLWWRNAARREGVARARAEAAAQLKAVTSK
IVARYEATLAAMANDLAAAQASADRERARGMKLEDDLRRALLRGMTVMNM
EALGVFHDNRASAPPPPPALSPPARAPATPSRGDVLGGASPGGVRVVASA
TDMYPRRHGPPPPYHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033351POC5