Trimin1|348554|estExt_Genemark1.C_Ctg_270008 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348554
Unique NameTrimin1|348554|estExt_Genemark1.C_Ctg_270008
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length624
Homology
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A836CEN5_9STRA (Kinetochore protein NDC80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN5_9STRA)

HSP 1 Score: 1078 bits (2788), Expect = 0.000e+0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query:    1 MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE 623
            MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE
Sbjct:    1 MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGALSAVAGCGAVERLWELSAERAEE 623          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: D8LLF2_ECTSI (Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF2_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.230e-92
Identity = 209/516 (40.50%), Postives = 290/516 (56.20%), Query Frame = 0
Query:   32 RHSLAAPGGRKSSVGMKRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG---------EVDIADHA-----FFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTR--QARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAA---AKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRL 527
            R S++  G RKS VG++R+++FGT    ++D RP+ DK   N S+  L  YL D+GYDQPI++K LTRPSGRDFNNI GFLFRQ DP ++PS   RFED+V+PFLK + YPFT+SKS L AVGAPQ+WPK + AISWIV+ L+YD+ +A  E EQ+ R             E  + D       F  YL +AY CFL GD+ +  A+  +   T     +  GAE   R  +  N AL +  + +L +  +LP L +  +   SD EK   L+ +++ HR  L EKV+KR  EE R K  L  + E  A+LRE++A QE SA            D++    ER RLRD +  A E K  A+K GW A++++S   EAL+  +H    +A+AL LVP     A+NA   +Y + I+   L+ E+ VL+NDVRG IRPAL  ++ A+VRR    R+ L  LL  ++ +E                       Y + K ALD  +A   ++    ERRL
Sbjct:   97 RPSMSTAGDRKS-VGVRRTTSFGTGGGSRSDQRPLMDKAHLNASLHKLAAYLTDHGYDQPINSKSLTRPSGRDFNNITGFLFRQLDPNYRPS--GRFEDDVVPFLKMVRYPFTISKSSLAAVGAPQTWPKVMGAISWIVDALLYDETIAVAEEEQRAREREATPEEXXRDKEDGVDDQGADQKNFVAYLEEAYCCFLEGDDEAHQAVTTEY--TEARDEEDAGAEEFLRNLEEANEALGQTNQELLDQGNSLPALEEGLKLTLSDNEKITSLLEEIETHRRLLQEKVDKRVEEERRLKEPLPLLEEASASLREQIATQEFSAS-----------DMEGQLSERSRLRDALAGAGEAKVKARKEGWSAQVEVSSTKEALKENLHRYREQAEALLLVPFGTQPAENAGETNYAVDIDDTKLDQEDGVLTNDVRGVIRPALKELKIAIVRRTAGLRQDLSNLLVEEDKAEENITDVLSEVELLHKQVKRKEEAYNKSKYALDKQVAGGKSETEHEERRL 596          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: W7TL40_9STRA (Kinetochore protein NDC80 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL40_9STRA)

HSP 1 Score: 298 bits (762), Expect = 5.890e-88
Identity = 195/495 (39.39%), Postives = 284/495 (57.37%), Query Frame = 0
Query:   41 RKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG-------EVDIADH-AFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLE---DEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 524
            RKSS G+++S+ +G+  ++ DPRP TDK +   SIR L+NYL D+ YDQP SAKIL RP+ +DF  I+ FLFRQ D  ++ +   + EDEV+ F K++ YPF +SK+ +QAVG   +WP  LA+I+W+VELL YD+EV    + Q     +G       + + AD  A FEYLG+AY  FL+GD+     LE  LVG+F  +   + A+ Q  + +   +R       +R  ALP L+QR  D  SDL KFR LI QL  HR+ L  KVEKR  E       L  VR Q+  L+  VA QELS E           DV RM  ER RL + +  A EHK+   K  WEAE+++SR +  LE A  T N+KA AL L+P  A+N+NG  YE+ +++ ++    + E ++  D++G IRP+LA +++ ++ ++ EAR  +L++LD +  +E                       Y+ EK  ++A MA K++   A+E
Sbjct:  102 RKSSTGLRKSTAYGSH-VRQDPRPNTDKGYIQASIRGLINYLTDHNYDQPFSAKILQRPTAKDFTYIVSFLFRQVDANFRIT--GKLEDEVLAFFKAMRYPFAISKASMQAVGTMHTWPTLLASITWMVELLTYDEEVQNDAANQAALAGSGSGCGSVDDFERADEKALFEYLGKAYKAFLDGDDDLYAQLEDSLVGSFETRCGEMQAQCQALETKIEDMRTEMAACHTRHAALPGLQQRHSDYLSDLGKFRSLIEQLTAHREGLAAKVEKREEELSSLYRSLEDVRGQVGELKAVVAAQELSPE-----------DVARMQQERARLDEALDKAREHKAKMHKTLWEAEIEVSRAVVDLETAAQTFNTKAAALNLIPITARNSNGIQYEMVVSKGAVSASAEPEELIGLDMKGVIRPSLAQIKNVMLDKVHEARTSVLKMLDEEAKTEEEVAEAVAELETLEGKVKKQEEGYKAEKARMEASMAEKSSNVDAVE 582          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: K3WJZ8_GLOUD (Kinetochore protein NDC80 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJZ8_GLOUD)

HSP 1 Score: 252 bits (644), Expect = 1.040e-71
Identity = 179/537 (33.33%), Postives = 281/537 (52.33%), Query Frame = 0
Query:   59 KTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAG-EVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHS---LEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARXXXXXLRGEMQAXXXXXXXXXAATKQEIHEALVVCWDFQDGAKGALA 591
            + DPRP+TDK + N  I AL+ +L+D  YD  +S KIL  PS +DF NI+ FLFRQ DP ++   G +FE++V   LK++ YPF +SK+ L AVG+P +WP  L +I+W++ELL YD+ V      Q+D  +   + +  D AFFEYLG AY  FL GD+     LEQ        QNQ+I  E    +  N  L+   E+  S   +LP L  ++ DC SDLEKF+ L+AQL+ H+ +L++K+++R  E  + + +L   + +I  L  R+ +QELSAE           DV++M+ ER RL +    AA+ +   Q   W  E  ++ +++A+EN V   +  A  ++L+P  AKN  G DYE+ I+ H+   +  ++  LS  ++ HIRPAL   +     R   A +++L+L    E S                         RRE++A +A +  K      +E ++ S  + +  A + T +R     L+    +            + E+  ALV C D ++  + A+A
Sbjct:  101 RADPRPLTDKTYMNGCIHALIEFLSDRQYDHVLSPKILKGPSKKDFYNIILFLFRQVDPTFEF--GVKFEEDVATQLKTLRYPFAISKTALVAVGSPHTWPALLGSIAWVIELLSYDEIV------QRDTNVEEFDGENGDKAFFEYLGTAYRVFLAGDDDQYNELEQREATKIDSQNQVIRDECSELERANEELKRRIEQAKSAKSSLPALNSKKADCLSDLEKFKKLVAQLEAHQASLIQKIQERDQERLKKEHELQARQREIQNLTIRIESQELSAE-----------DVEQMSKERARLNEQCHLAAQRQKEIQSNIWRQETTIAEQMDAIENLVKQYSITATNMKLLPVMAKNTFGVDYEIEIDAHTGGVVAAQQ--LSQHLKQHIRPALLNFKKNRSDRRSVALDEVLQLQGDVEHSRAVFNVEYQKEQTLESKAKKMEDTVRREREAREATINQKLAITEDVELQIESILNEKDIATQETQSRQQFEALKKSYVSMTEKYSSLIEKNRHEVANALVSCTDHKETIEQAIA 616          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A1Y1ILS8_KLENI (Kinetochore protein NDC80 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILS8_KLENI)

HSP 1 Score: 238 bits (606), Expect = 2.350e-66
Identity = 182/481 (37.84%), Postives = 284/481 (59.04%), Query Frame = 0
Query:   48 KRSSNFGTAA-IKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKE-VAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGD--ETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 524
            +RSS FG+    K DPRP+ DK F+   IR+L+ YL ++GY+  IS K+L+ P+ ++F +I+ FLF + D   +  P  + EDEV    K + YPF +SKS LQAVG+P +WP  LAA++W+V+LL Y++  +AA E +  D       +     F EY+ Q+Y  FL G+  +   + L++ L   F  ++   G + +  +A N ALR   +   ++   L EL +++ +  SD+ KFR LI  L  H D L +KV+++ A       DL   R ++AA+     NQ+L+A   A S  ++AEDV RM+ E+ ++ + +      K   +K  W+AE+QLSR LE LE AV + ++    L+++P+ AK A G  +EL ++  +   E+ +LS D++G I+PALAA++DA   + + A+ ++L L +AQ+ SE     XXXXXXXXXXXXXXXXXX R EK+  +  +   A + +A E
Sbjct:   73 RRSSIFGSRPQAKNDPRPLADKGFQKACIRSLITYLTNHGYNHAISEKLLSTPTSKEFLHIVQFLFHKVDTNIKFGP--KIEDEVPLVFKRLRYPFQISKSALQAVGSPHTWPALLAALAWLVDLLNYEERAIAAKERDAFD-------ESGQRLFLEYVEQSYRLFLEGEARDADASLLDEQLAQQFEVRDAETGVDIERLEAANTALRAELDAARTQPAPLEELERKRENLISDVGKFRKLIENLQAHGDMLRKKVDEKTA-------DLAAKRTELAAVA--AENQDLTARVAAQS--INAEDVARMSKEKLKVEEVLRTVTAQKDRLEKDVWQAEVQLSRHLEELEGAVRSYHAAGDRLKVLPSDAKRAGGLQFELTLHARAARPED-MLSGDLKGVIKPALAAIKDAYTSKTRAAQAEVLGLAEAQDGSEEAVSEXXXXXXXXXXXXXXXXXXXRAEKERGEGEVRGMAAEVAATE 532          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7S4K7P6_9STRA (Kinetochore protein NDC80 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K7P6_9STRA)

HSP 1 Score: 237 bits (604), Expect = 5.350e-66
Identity = 165/503 (32.80%), Postives = 257/503 (51.09%), Query Frame = 0
Query:   36 AAPGGRKSSVGMKRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELL----MYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSN-DVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRLCSARDP 533
            A P  RKS+ G  R S    AA+K DPRPI +K++    I +L+ YL   GY+ P+S K L+RPSGRDFN I+ F+ R  DP++      +FEDEV    KS+ YP+ +SK+ L A G+P +WP  LAA+ W++ELL      ++++   E +     L      ++ AFF YL +AY  FL+ D+    ALE+ LV  F   N  I  E Q     N  ++E  +++L     LPEL+QR+ D A+DLEKF  L+ +L+ H+  L +KVE+R AE  + +  L  +  QI AL+ +V +QE S E           D++RM  E+ R  + +  AA  K+   K  WE   +LS+R++ L   V   N K   L L      N N  + EL  +   + D   + +  D++G + P + +++     +   A+   L+LLD +E +E                       +R+E    +  ++ +  +  A+E ++ S RDP
Sbjct:   63 ATPSRRKSNGGEWRQSLAPQAALKPDPRPIAEKSYMTSCINSLLQYLVSSGYEHPVSRKTLSRPSGRDFNQIVTFILRCIDPSFNDGT-QKFEDEVAMAFKSLGYPYPISKTALVAAGSPHTWPTLLAALMWLIELLGCEDSQEEDILRNEDDATMNSLEEIESRSEKAFFRYLNKAYVAFLSADDPQYEALEEALVEYFEKDNLKIEGEFQRVTETNMEIQEEIKQLLRNGEELPELKQRREDYATDLEKFYDLVKKLEEHKATLRKKVEERTAELVKREEGLQQITAQIDALKRQVQSQEFSVE-----------DIRRMQKEKVRQEESIARAAGAKNEQNKALWEVSTELSQRVDQLRETVEKYNWKVMELHLSAERDSNQNKYELELHTDLAQVGDPAKIFNGVDIKGSVLPMVFSLKCDFAEKCANAKRDTLKLLDQKEQTEKATAHATDCVKELDVKSKECEQLHRQESAENEMVLSNRLKEVDAIETKVFSLRDP 553          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7R9TIA6_9VIRI (Kinetochore protein NDC80 n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TIA6_9VIRI)

HSP 1 Score: 225 bits (574), Expect = 6.020e-62
Identity = 161/484 (33.26%), Postives = 248/484 (51.24%), Query Frame = 0
Query:   48 KRSSNFGTAAI-KTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDK---EVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALERRL 527
            +RSS +    + + DPRP +DK +    IR L+ YL+ +GYD PIS K+L  P+ +DF +I+ FLFR+ DP  +     + EDEV    K + YPF +SKS L AVG+P +WP  LAA+ W+VELL+Y++   E  A  S  +D    G        FFEY+ +AY  FL GD+ + TALE++L  TF  ++     E    +  NAAL+   E   +    L   ++++ +   D+ KF+ LI+ L  H+  L +K  +R AE E    +L      +  LR RVANQ +S +           DV+RM  +R R+ D +  A      A+++       ++ + E LE       SK +ALQ++PA AK ANG D+ L +N +  +    V + D+ G +RPALA + +   +R +E R +LL+L + Q  +                        Y  EK+  DA  A + + A+++E  L
Sbjct:   39 RRSSIYSRGPVARADPRPTSDKAYTQQGIRTLIAYLSSHGYDAPISPKLLAAPTSKDFMHIVSFLFRRLDPNIKFV--GKMEDEVPQVFKRLQYPFQISKSALYAVGSPHTWPGLLAALVWLVELLVYEERAEEARAAGSSGEDATAPGP-----RQFFEYVSKAYGAFLAGDDDTCTALEEELGETFRQRDAAAADEIARLEKANAALKAEIEAADTEPTPLARAQEKRANMEGDVAKFQKLISNLQTHKAQLAKKCGERMAEAEAKAAELKEALAVVDNLRARVANQAVSQD-----------DVKRMQRDRARINDELRGAVASHEDAERQADANAAAVAAKSEELEAIASEYTSKGEALQVLPAGAKRANGVDFTLVMNPNGAD----VCATDLEGSVRPALADVVEEYAQRTREDRRELLDLQEQQHKTTESLAEAREANAQARSELMALEERYTLEKERADADFAQQTSAAASVEEEL 500          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A7S3PLI3_9STRA (Kinetochore protein NDC80 (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLI3_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.870e-61
Identity = 151/449 (33.63%), Postives = 251/449 (55.90%), Query Frame = 0
Query:   41 RKSSVGM--------KRSSNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDI--ADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELS-AERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 478
            RKSSVG         ++SS + +  +K DPRPI++K F + SIR L+ +L+++ YD PIS K+L+RP+G+DF N++ FLF   D   +   G +F DEV P  K + YPF +SK+ L AVG+  +WP  LA++ W++ELL Y          + +R    E+D+   D  FF YL QAY  FL GD+     L+ +L+GTFG ++  I  +    + +   L +  ++I +   +LP L  +++D   DL KF+ L+ +L  H++ L  K+    AE    + +L       A L++++  QELS A+   + +E  A  V++  + ++R  +GM          QK  WE EM ++++LE LEN     N  A  L+LVP +A+N+ G D+EL +N     + E++L+ DV+  ++ +L +++D+ + +  E + Q +E  +  E +E
Sbjct:   87 RKSSVGTNLSSHNSGRQSSVYSSTVLKNDPRPISNKGFMHASIRKLIQFLSEHNYDHPISPKVLSRPTGKDFQNVLQFLFLLVDRNLKF--GQKFTDEVPPIFKGLCYPFNISKTALSAVGSLHTWPPLLASLIWLMELLEYH---------EAERHRESEIDLENGDKVFFTYLRQAYQSFLCGDDDKSEELDNELLGTFGERDSAIQEQTSQLETQREDLLKDLDKIKNSKSSLPALTCQKKDYQEDLVKFQGLVKKLREHKENLEGKLRSSEAEFNARQQELNEALSVKAKLQKQLDEQELSPADAERIISEREAATVEQGQVNQKR--EGM----------QKSAWEIEMTIAKKLEQLENMTSKYNEVAARLKLVPKSAQNSQGVDFELKLNLAGFGNGEDLLNVDVKKVLKTSLFSLKDSAMTKTNEIKTQCMEFQEQVEKNE 512          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A5B8MIC0_9CHLO (Kinetochore protein NDC80 n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIC0_9CHLO)

HSP 1 Score: 224 bits (571), Expect = 1.930e-61
Identity = 152/457 (33.26%), Postives = 252/457 (55.14%), Query Frame = 0
Query:   25 RASLAAVR-HSLAAPGGRKSSVGMKR-SSNFG-TAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASE 478
            RASLA V  H+     GRK+  G +R SS FG +   K DPRP+TDK + ND +RAL++YL  +GYD P+S K LT P+ +DF  I+ FLF++ D + +     + E+EV    K + YPF +S+S L AVG+P SWP  LAA++W+VELL Y+++ A    +  D     E D +   FFE++G++Y  FL+GD+     LE +L  TF  +++ I AE +  +     L+ +   + ++   L  L+Q++RD  SD+ KF  LI +L  H++A+ +K   R                      E V++Q ++ E           DV RMA +R +L+D + +    K +      E E +  +++E LE      +  A  LQL+P+ AK+A G ++++ +N  SL+D   V + D++  ++PAL A+R++  ++ +   E++ E+ +  +++E
Sbjct:   40 RASLAGVPGHNGPKTPGRKTPGGTRRRSSIFGWSQQSKHDPRPLTDKQYLNDCVRALISYLTTHGYDNPVSPKTLTHPTCKDFVQIVTFLFKKVDASLKIV--GKMEEEVPQIFKKLKYPFPISRSALYAVGSPHSWPSLLAALTWLVELLNYEEKAAEVREKSVDNF---ECDTSSRDFFEFVGKSYKSFLSGDDGECFVLEDELRATFQEKDKEIIAEVERHEQEIEGLKGSIAGLTAKPTPLEALQQKRRDLDSDINKFESLITKLKEHKEAVEQKTRDRXXXXXXXXXXXXXXXXXXXXXXEVVSSQSINKE-----------DVHRMAQQRSKLQDILQSLTSQKDSLLDAALEDEAKFEKKVEELEGTTRQYHVMADRLQLIPSTAKHAEGVNFQIKLNA-SLDDPSEVFNVDMKNKLKPALNALRESYAKKTRLVTEEMTEIQEKVDSAE 479          
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Match: A0A0D2JWS7_9CHLO (Kinetochore protein NDC80 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JWS7_9CHLO)

HSP 1 Score: 209 bits (532), Expect = 1.090e-56
Identity = 154/517 (29.79%), Postives = 250/517 (48.36%), Query Frame = 0
Query:   48 KRSSNFGT--AAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPSGRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQAVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDI----ADHAFFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNAALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEKVEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDVQRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCNSKAQA----------------------------------LQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALAAMRDAVVRRMQEAREQLLELLDAQEASEXXXXXXXXXXXXXXXXXXXXXXXYRREKDALDAHMAAKATQASALE 524
            +RSS FG   A +K DPRP+ DKNF N  IR ++ YL+ +GY   +S KILT P+G+DF  I+ FLF++FDP+ +     + EDEV  F K ++YPF +SKS L AVG+P SWP  LAA++W+VELL Y+++    E    D    G +D     ++ AF+EY+  +Y  FL+GD+      +++++G    +   + +E +  +  + AL    E + +    L      + +C+ D  KF   +  +   +     KVE+R AE    K  L  + ++   LR ++ANQ LS             DV R+  ER +L+  + +  E +   ++R +E E+++ R L+ LE +V   N  A +                                  L L+PA+AK A G ++EL ++R   E  + ++  D++G I+P L A+R+    R ++  E  L L +  +A+                        YR  +D LD  M     QA  ++
Sbjct:    4 RRSSAFGKGGAGLKADPRPLGDKNFLNACIRTVITYLSTHGYPYAVSPKILTSPTGKDFAQIVQFLFQRFDPSMKVF--GKVEDEVPLFFKRLNYPFQISKSALFAVGSPHSWPSVLAALTWLVELLNYEEKA---EEAAADPAGPGSLDSDRQRSERAFYEYVAGSYRSFLSGDDVRCAQADEEMLGQIRDREGALTSELERLRESSDALGRTLESLRTAPSPLVAATAARDECSRDKAKFEAALENMRAAKVTCARKVEERKAELTSRKQQLADILQENDQLRAQIANQSLSRA-----------DVNRLLAERGKLKGVLDSVVEAREGLERRAYEQELKVERSLKELEESVRQYNLAAHSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARLALIPASAKRAGGTNFELSVSRGE-EAPQGLVGADIKGSIKPGLVALRERYRGRARDLAEDGLGLAEQLDAAREAVRERAEDEANAKLQVQRLEVAYRALRDELDGDMRTTGEQADRIK 503          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348554 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEN5_9STRA0.000e+0100.00Kinetochore protein NDC80 n=1 Tax=Tribonema minus ... [more]
D8LLF2_ECTSI2.230e-9240.50Kinetochore protein NDC80 n=2 Tax=Ectocarpus TaxID... [more]
W7TL40_9STRA5.890e-8839.39Kinetochore protein NDC80 n=2 Tax=Monodopsidaceae ... [more]
K3WJZ8_GLOUD1.040e-7133.33Kinetochore protein NDC80 n=1 Tax=Globisporangium ... [more]
A0A1Y1ILS8_KLENI2.350e-6637.84Kinetochore protein NDC80 n=1 Tax=Klebsormidium ni... [more]
A0A7S4K7P6_9STRA5.350e-6632.80Kinetochore protein NDC80 n=1 Tax=Odontella aurita... [more]
A0A7R9TIA6_9VIRI6.020e-6233.26Kinetochore protein NDC80 n=1 Tax=Prasinoderma col... [more]
A0A7S3PLI3_9STRA1.870e-6133.63Kinetochore protein NDC80 (Fragment) n=1 Tax=Aplan... [more]
A0A5B8MIC0_9CHLO1.930e-6133.26Kinetochore protein NDC80 n=2 Tax=Chloropicon prim... [more]
A0A0D2JWS7_9CHLO1.090e-5629.79Kinetochore protein NDC80 n=1 Tax=Monoraphidium ne... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..508
NoneNo IPR availableCOILSCoilCoilcoord: 453..484
IPR038273Ndc80 domain superfamilyGENE3D1.10.418.30Ncd80 complex, Ncd80 subunitcoord: 57..174
e-value: 1.3E-34
score: 120.8
IPR005550Kinetochore protein Ndc80PFAMPF03801Ndc80_HECcoord: 51..183
e-value: 5.1E-39
score: 133.3
IPR005550Kinetochore protein Ndc80PANTHERPTHR10643KINETOCHORE PROTEIN NDC80coord: 22..596

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:67107..72278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348554mRNA_6873Tribonema minus UTEX_B_3156 mRNAContig_27 67107..72613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348554|estExt_Genemark1.C_Ctg_270008 ID=Trimin1|348554|estExt_Genemark1.C_Ctg_270008|Name=jgi.p|Trimin1|348554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=624bp
MAAPGRMSLNVGNAMGRGTAAPPPRASLAAVRHSLAAPGGRKSSVGMKRS
SNFGTAAIKTDPRPITDKNFRNDSIRALVNYLADYGYDQPISAKILTRPS
GRDFNNIMGFLFRQFDPAWQPSPGARFEDEVIPFLKSIHYPFTLSKSLLQ
AVGAPQSWPKALAAISWIVELLMYDKEVAAYESEQQDRRLAGEVDIADHA
FFEYLGQAYACFLNGDETSLTALEQDLVGTFGHQNQLIGAEAQTRQARNA
ALREATERILSRAGALPELRQRQRDCASDLEKFRLLIAQLDGHRDALVEK
VEKRAAEEERAKGDLGGVREQIAALRERVANQELSAERMALSNELSAEDV
QRMALERQRLRDGMLAAAEHKSAAQKRGWEAEMQLSRRLEALENAVHTCN
SKAQALQLVPAAAKNANGQDYELGINRHSLEDEENVLSNDVRGHIRPALA
AMRDAVVRRMQEAREQLLELLDAQEASEEQLSEQVDAHAALESRVKRSED
AYRREKDALDAHMAAKATQASALERRLCSARDPQGAAARATAARARAAAL
RGEMQAARAAAAAASAATKQEIHEALVVCWDFQDGAKGALAELRAQGEGA
LSAVAGCGAVERLWELSAERAEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038273Ndc80_sf
IPR005550Kinetochore_Ndc80