Homology
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A835ZFQ0_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ0_9STRA)
HSP 1 Score: 129 bits (325), Expect = 5.930e-27
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
Query: 1 MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA 432
MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA
Sbjct: 1 MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA 144
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A835ZDJ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ9_9STRA)
HSP 1 Score: 114 bits (284), Expect = 2.470e-32
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1
Query: 1 MGDLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEEQ 156
MGDLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEEQ
Sbjct: 1 MGDLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEEQ 52
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A3P3YIV0_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YIV0_PLABS)
HSP 1 Score: 57.8 bits (138), Expect = 1.590e-8
Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 19 QIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEEQ 156
++ E++ +GW +LSQHCP+C+TVL+ + + CVSC+ C+TEEQ
Sbjct: 14 RLSEKMMQGWTLLSQHCPRCTTVLVGHKTHGVECVSCEMPCVTEEQ 59
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A0G4IL30_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IL30_PLABS)
HSP 1 Score: 57.8 bits (138), Expect = 2.130e-8
Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 19 QIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEEQ 156
++ E++ +GW +LSQHCP+C+TVL+ + + CVSC+ C+TEEQ
Sbjct: 586 RLSEKMMQGWTLLSQHCPRCTTVLVGHKTHGVECVSCEMPCVTEEQ 631
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A1D2A727_AUXPR (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A727_AUXPR)
HSP 1 Score: 56.6 bits (135), Expect = 4.350e-8
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 7 DLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQ 132
++ + + +R+ GW +L Q CP CSTVL+RSR++Q+FCVSC+
Sbjct: 107 EISQSLADRMLHGWTLLGQSCPICSTVLVRSRERQVFCVSCK 148
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A1D1ZSX5_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZSX5_AUXPR)
HSP 1 Score: 56.6 bits (135), Expect = 4.450e-8
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 7 DLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQ 132
++ + + +R+ GW +L Q CP CSTVL+RSR++Q+FCVSC+
Sbjct: 112 EISQSLADRMLHGWTLLGQSCPICSTVLVRSRERQVFCVSCK 153
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A9NSW4_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NSW4_PICSI)
HSP 1 Score: 56.2 bits (134), Expect = 4.680e-8
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 7 DLHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTE 150
D I +L +GWA+LS HCPQC T L+R+R+++++CVSC + +TE
Sbjct: 26 DSSAAIAVKLLQGWALLSDHCPQCVTPLVRNRERRMYCVSCSQWVITE 73
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A8K1C5E5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5E5_PYTOL)
HSP 1 Score: 55.5 bits (132), Expect = 6.740e-8
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 7 DLHRQIGERLSEGWAMLSQHCP--QCSTVLLRSRDQQIFCVSCQCYCLTEEQ 156
D ++GE+L +GW ML HCP +C T L+R++ Q+FCVSC + +TEE+
Sbjct: 15 DASARLGEKLLQGWTMLGVHCPSDECFTPLVRNKQGQMFCVSCNRFAITEEE 66
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
UPI001AE72D59 (protein ZNRD2 isoform X2 n=2 Tax=Gallus gallus TaxID=9031 RepID=UPI001AE72D59)
HSP 1 Score: 50.8 bits (120), Expect = 4.150e-6
Identity = 20/41 (48.78%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 10 LHRQIGERLSEGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQ 132
+ R +G+ L G+ ML CPQC T+LL+ R QQ++CV+CQ
Sbjct: 27 ISRALGQYLLRGYRMLGSCCPQCQTILLQDRQQQLYCVTCQ 67
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A7S0D1M1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D1M1_9EUKA)
HSP 1 Score: 50.1 bits (118), Expect = 1.090e-5
Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 7 DLHRQIGERLSEGWAMLSQHCPQ--CSTVLLRSRDQQIFCVSCQ 132
++ +IG +L GWAML+++CP+ C VLLRSRD + +CVSC+
Sbjct: 151 EISDKIGAKLLAGWAMLNEYCPKQTCKCVLLRSRDGEKYCVSCE 194
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match:
A0A8J9WKZ4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKZ4_9CHLO)
HSP 1 Score: 47.0 bits (110), Expect = 5.310e-5
Identity = 18/38 (47.37%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 40 EGWAMLSQHCPQCSTVLLRSRDQQIFCVSCQCYCLTEE 153
+GW +L CP+C T+L+R+R++++FCVSC + L EE
Sbjct: 3 QGWTLLGDQCPRCLTILVRNRERELFCVSCDMF-LREE 39
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 5.93e-27 / Id = 100.00 Sequence A0A835ZFQ0_9STRA 0 1 Expect = 2.47e-32 / Id = 100.00 Expect = 1.59e-8 / Id = 47.83 Expect = 2.13e-8 / Id = 47.83 Expect = 4.35e-8 / Id = 50.00 Expect = 4.45e-8 / Id = 50.00 Expect = 4.68e-8 / Id = 47.92 Expect = 6.74e-8 / Id = 46.15 Expect = 4.15e-6 / Id = 48.78 Expect = 1.09e-5 / Id = 50.00 Expect = 5.31e-5 / Id = 47.37 Sequence A0A835ZDJ9_9STRA A0A3P3YIV0_PLABS A0A0G4IL30_PLABS A0A1D2A727_AUXPR A0A1D1ZSX5_AUXPR A9NSW4_PICSI A0A8K1C5E5_PYTOL UPI001AE72D59 A0A7S0D1M1_9EUKA A0A8J9WKZ4_9CHLO
Match Name E-value Identity Description
A0A835ZFQ0_9STRA 5.930e-27 100.00 Tfp pilus assembly protein PilF n=1 Tax=Tribonema ... [more]
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Sequences
The following sequences are available for this feature:
spliced messenger RNA
>mRNA_9497 ID=mRNA_9497|Name=jgi.p|Trimin1|173754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2784bp|location=Sequence derived from alignment at Contig_106:129436..141490- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGTGGCAAGGACGCTCGGCAATCTCGGCATTGTGCTTCGGGCACA back to top protein sequence of jgi.p|Trimin1|173754
>Trimin1|173754|e_gw1.106.71.1 ID=Trimin1|173754|e_gw1.106.71.1|Name=jgi.p|Trimin1|173754|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=928bp
MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASLY back to top mRNA from alignment at Contig_106:129436..141490-
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9497 ID=mRNA_9497|Name=jgi.p|Trimin1|173754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12055bp|location=Sequence derived from alignment at Contig_106:129436..141490- (Tribonema minus UTEX_B_3156 )ATGGAGGTGGCAAGGACGCTCGGCAATCTCGGCATTGTGCTTCGGGCACA
AGGCGATTTGCAGGGTGCGGAGGGGATGCAGCGGCGCGCGCTTGCCATAC
GCGAGGAGGTGCTAGGCCTGAAGCATCCAGACACAGCGGCATCGCTATAC
AACCTCGCCATCCTCCTCGACACTCAAGGCACACTCAAAGAAGCTGAGGC
GTTGTACCGTCGCGCACTAGCGATCTTTGAGGAAGTGATGGGTCCCGAGC
ATCCCGATACA CTTGCTTGGCTC
GCTTTCACATTAAATGAGAGGCACATGCTTGTCGAGGCGGCGCCCTTGTA
CGTGCGCGCGCTCGCCATCAGTGAGGAGGCCCTGGGCCCGAAGCATCCCT
CGACGGCGGCGTTGCTCGAGAACCTCGCCATGTTACATAAAGCGCAGGGC
AACTTTGCGGAGGCGGCGCCCTTGTGCGCACGCGCGCTCGCCATCAGGGA
GGAGGTGCTGGGCCCGAGGCATCCCTCGACGGCGGCGTCGCTCAACAACC
TCGCTTCGTTACATGAAGCGCAGGGCCACTTTGCGGAGGCGGCGTCCTTG
TTCGTGCGCGCGCTCGCCATCAGCGAGGAGGCGCTGGGCCCGAAGCATCC
CGACATGGCGGCGCTGCTCAACAACGTCGCCGGCCTTCTCGAAGGGCAGG
GCAACTTTGCAGAGGCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCAGC
GAGGAGGCGCTAGGCCCGAAGCATCCCTTGACGGCACAGTTGCTCAACAA
CCTCGCCGGCCTCCTCACAGCGCAGGGCAACTTTGCGGAGGCGGCGCCCT
TGCTCTCGCGCGCGCTCGCCATCAACAAGGAGGTGCTGGGCCCGAAGCAT
CCAGAAACGGCATCGTCGCTCAACAACCTCGCTGCGTTGTATAAGAAGCA
GGGCAACGTTGCGGCTGCCGCGCCATTGTACGTGCGCGCGCTCGCCATCA
GCGAGGAGGTGCTGGGCCCGAGGCATCCCGACACGGCGACGTCGCTCAAC
AACCTCGCTTCTCTTTACGCAGCGCAGGGCAACGTTGCGGAGGCAGCGCC
CTTGTACGTGCGCGCGCTCGCCATCAATGAGGAGGCGGAGGGCCCGAAGC
ATCCCTTGACGGCGACGTCGCTCAACAACCTCGCCGGCCTCCTCCAAGCG
CAGGGCAACTTTGCGGATGCGGCGCCCTTGTACGCGCGCGCGCTCGCCAT
CAGTGAGGAGGCGCTGGGCCCGAGGCATCCCTCGACGGCGGCGTCGCTCA
ACAACCTCGCTTCTCTTTACGAAGCGCAGGGCAACTTTGCGGAGGCCGCG
CCCTTGTACGTGCGCGCGCTCGCCATCAGCGAGGAGGCGCTGGGCCCGAA
GCATCCAGACACGGCATCGTCGCTCAACAACCTCGCTGGGTTACATCAAG
CGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTTCGTGCGCGCGCTCGCC
ATCAGGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGGCGGCGTCGCT
CAAAAACCTCGCCGGCGTCCTCGAAGCGCAGGGCAACGTTGCGGCTGCCG
CGCCATTGTACGTGCGCGCGCTCGCCATTTGCGAGGAGGCGCTGGGCCCG
AAGCATCCCTGGACGGCGACGTCGCTCAACGACCTCGCCGTCCTCCTCGC
AGCGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTACGCGCGCGCGCTCG
CCATCAAGGAGGAGGCGCTGGGCCCGAAGCATCCCTCGACGGCGGCGTCG
CTCGACAACCTCGCCATGTTACATAAAGCGCAGGGCAACTTTGCGGAGGC
GGCGCCCTTGTGCGCACGCGCGCTCGCCATCAGGGAGGAGACGCTGGGCC
CGAAGCATCCCTCGACGGCGACGTCGCTCAACAACCTCGCTTCGTTACAT
GAAGCGCAGGGCCACTTTGCGGAGGCGGCGTCCTTGGTTGTGCGCGCGCT
CGCCATCAGCGAGGAGGCGCTGGGCCCGAAGCATCCAGACACAGCGACGT
TGCTCAACAACCTCGCCATGCTCATCAAAGCTCAAGGCGAGTTGACAAAA
GCGGCGCCGTTGTACGAGCGCGCTCTTGCCATTCGCGAAGAGGTGCTGGG
CCCCAAGCATCCAGACACGGCAACTTCGCTATACAACCTCGCTGACCTCC
TCGAAAATCAGGGTAAAATTGAAGAAGCGGTGCCGTTGTACACACGCGAG
CTCGCCATATGTGAGGAGGTTTTGGGCGCGGAGCATCCTTCAACT CTTGCTTTCCA
GTTAGTGGACAGACAAATGCTGATGGAGGCGGCGCCCTTGTACGTGCGCG
CGCTCGCCATCAACGAGGAGGCGCTGGGCCCGAAGCATCCTTCCACGGCA
TCGTCGCTCAACAACCTCGCCGGCCTCCTCGAAGCGCAGGGCAACTTTGC
GGAGGCGGCGCCCTTGTACGCGCGCGCGCTCGCCATCTATGAGGAGGCGC
TGGGCCCGAAGCATCCTGAGACGGCGACGTCGCTCGACAACCTCGCTTCG
TTACATCAAATGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTACGTGCG
CGCGCTCGCCATCAGGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGG
CGACGTCGTGCGGTAACCTCGCTTCATTACATGAAGCGCAGGGCAACTTT
GCGGAGGCTGCGCCCTTGCTCGCGTGCGCGCTCGCCATCAGGGAGGAGGC
GCTGGGCCCGAAGCATCCCGACATGGCGGCGCTGCTCAACAACCTCTCTT
CGTTA back to top Coding sequence (CDS) from alignment at Contig_106:129436..141490-
>mRNA_9497 ID=mRNA_9497|Name=jgi.p|Trimin1|173754|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2784bp|location=Sequence derived from alignment at Contig_106:129436..141490- (Tribonema minus UTEX_B_3156 ) back to top