Trimin1|173754|e_gw1.106.71.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|173754
Unique NameTrimin1|173754|e_gw1.106.71.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length928
Homology
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BLAST of jgi.p|Trimin1|173754 vs. uniprot
Match: A0A835ZFQ0_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 5.930e-27
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    1 MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA 144
            MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA
Sbjct:    1 MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAWLAFTLNERHMXXXXXXXXXXXXXXXXXXXXXXXXXXAALLENLAMLHKAQGNFA 144
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173754 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZFQ0_9STRA5.930e-27100.00Tfp pilus assembly protein PilF n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 918..928
NoneNo IPR availablePFAMPF13424TPR_12coord: 3..78
e-value: 1.7E-19
score: 69.8
coord: 503..579
e-value: 1.3E-19
score: 70.3
coord: 335..411
e-value: 2.1E-19
score: 69.6
coord: 671..747
e-value: 5.6E-20
score: 71.4
coord: 420..495
e-value: 1.8E-20
score: 73.0
coord: 588..663
e-value: 2.5E-18
score: 66.1
coord: 252..327
e-value: 1.8E-18
score: 66.6
coord: 796..867
e-value: 4.9E-20
score: 71.6
coord: 129..201
e-value: 3.2E-18
score: 65.8
NoneNo IPR availablePFAMPF13374TPR_10coord: 876..917
e-value: 2.3E-9
score: 36.8
coord: 88..124
e-value: 0.0022
score: 17.8
coord: 211..250
e-value: 5.2E-8
score: 32.5
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 314..566
coord: 86..314
coord: 138..398
coord: 523..756
coord: 389..652
coord: 2..146
coord: 768..926
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 120..139
score: 24.5
coord: 142..160
score: 36.84
coord: 207..224
score: 48.89
coord: 251..271
score: 44.76
coord: 286..307
score: 45.91
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 169..202
e-value: 0.35
score: 19.9
coord: 505..538
e-value: 14.0
score: 13.6
coord: 877..910
e-value: 6.7
score: 15.7
coord: 547..580
e-value: 0.55
score: 19.3
coord: 835..868
e-value: 2.1
score: 17.3
coord: 589..622
e-value: 0.31
score: 20.1
coord: 463..496
e-value: 0.5
score: 19.4
coord: 253..286
e-value: 0.14
score: 21.3
coord: 793..826
e-value: 0.56
score: 19.2
coord: 715..748
e-value: 0.46
score: 19.5
coord: 379..412
e-value: 1.4
score: 17.9
coord: 4..37
e-value: 4.1
score: 16.4
coord: 631..664
e-value: 12.0
score: 14.3
coord: 673..706
e-value: 0.61
score: 19.1
coord: 337..370
e-value: 0.027
score: 23.7
coord: 211..244
e-value: 11.0
score: 14.5
coord: 127..160
e-value: 0.15
score: 21.2
coord: 421..454
e-value: 0.0069
score: 25.6
coord: 46..79
e-value: 0.082
score: 22.0
coord: 295..328
e-value: 0.017
score: 24.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 169..202
score: 8.2309
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 337..370
score: 8.7914
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 421..454
score: 8.9094
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 347..529
e-value: 5.4E-70
score: 237.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 252..341
e-value: 6.7E-24
score: 86.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 760..928
e-value: 1.4E-60
score: 206.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 91..238
e-value: 1.2E-51
score: 177.4
coord: 609..759
e-value: 1.2E-58
score: 200.5
coord: 1..90
e-value: 4.5E-32
score: 113.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 530..606
e-value: 8.8E-19
score: 70.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..92
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 334..743
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 81..201
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 164..285
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 712..907

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:129436..141490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173754mRNA_9497Tribonema minus UTEX_B_3156 mRNAContig_106 129436..141490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|173754|e_gw1.106.71.1 ID=Trimin1|173754|e_gw1.106.71.1|Name=jgi.p|Trimin1|173754|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=928bp
MEVARTLGNLGIVLRAQGDLQGAEGMQRRALAIREEVLGLKHPDTAASLY
NLAILLDTQGTLKEAEALYRRALAIFEEVMGPEHPDTLAWLAFTLNERHM
LVEAAPLYVRALAISEEALGPKHPSTAALLENLAMLHKAQGNFAEAAPLC
ARALAIREEVLGPRHPSTAASLNNLASLHEAQGHFAEAASLFVRALAISE
EALGPKHPDMAALLNNVAGLLEGQGNFAEAAPLYVRALAISEEALGPKHP
LTAQLLNNLAGLLTAQGNFAEAAPLLSRALAINKEVLGPKHPETASSLNN
LAALYKKQGNVAAAAPLYVRALAISEEVLGPRHPDTATSLNNLASLYAAQ
GNVAEAAPLYVRALAINEEAEGPKHPLTATSLNNLAGLLQAQGNFADAAP
LYARALAISEEALGPRHPSTAASLNNLASLYEAQGNFAEAAPLYVRALAI
SEEALGPKHPDTASSLNNLAGLHQAQGNFAEAAPLFVRALAIREEALGPK
HPDTAASLKNLAGVLEAQGNVAAAAPLYVRALAICEEALGPKHPWTATSL
NDLAVLLAAQGNFAEAAPLYARALAIKEEALGPKHPSTAASLDNLAMLHK
AQGNFAEAAPLCARALAIREETLGPKHPSTATSLNNLASLHEAQGHFAEA
ASLVVRALAISEEALGPKHPDTATLLNNLAMLIKAQGELTKAAPLYERAL
AIREEVLGPKHPDTATSLYNLADLLENQGKIEEAVPLYTRELAICEEVLG
AEHPSTLAFQLVDRQMLMEAAPLYVRALAINEEALGPKHPSTASSLNNLA
GLLEAQGNFAEAAPLYARALAIYEEALGPKHPETATSLDNLASLHQMQGN
FAEAAPLYVRALAIREEALGPKHPDTATSCGNLASLHEAQGNFAEAAPLL
ACALAIREEALGPKHPDMAALLNNLSSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf