Trimin1|163735|e_gw1.27.189.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163735
Unique NameTrimin1|163735|e_gw1.27.189.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length606
Homology
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BLAST of jgi.p|Trimin1|163735 vs. uniprot
Match: A0A835Z2F0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.760e-22
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    1 MLTNTAPLVLQSDAPPPAEALLTRPPEHISGPALTSLGVSNSYGIARIPDSIGELTA 57
            MLTNTAPLVLQSDAPPPAEALLTRPPEHISGPALTSLGVSNSYGIARIPDSIGELTA
Sbjct:    1 MLTNTAPLVLQSDAPPPAEALLTRPPEHISGPALTSLGVSNSYGIARIPDSIGELTA 57
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BLAST of jgi.p|Trimin1|163735 vs. uniprot
Match: A0A835YXX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 9.840e-11
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:  570 DECGVKGVPATFVHAPGTRYWERIYAAYATVARKRS 605
            DECGVKGVPATFVHAPGT +WERIYAAYATVARKRS
Sbjct:  531 DECGVKGVPATFVHAPGTGHWERIYAAYATVARKRS 566
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163735 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z2F0_9STRA1.760e-22100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXX7_9STRA9.840e-1194.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 19..151
e-value: 6.2E-30
score: 105.8
coord: 166..366
e-value: 7.2E-49
score: 168.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 376..591
e-value: 2.3E-42
score: 146.6
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 96..235
coord: 332..452
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 96..235
coord: 332..452
coord: 239..378
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 405..526
coord: 513..573
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 165..281
coord: 33..165
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 513..573
NoneNo IPR availablePANTHERPTHR16083:SF26LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2coord: 165..281
coord: 405..526
coord: 33..165
coord: 239..378
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 28..329
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 260..570

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:1074477..1078841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163735mRNA_6992Tribonema minus UTEX_B_3156 mRNAContig_27 1074477..1078841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163735|e_gw1.27.189.1 ID=Trimin1|163735|e_gw1.27.189.1|Name=jgi.p|Trimin1|163735|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=606bp
MLTNTAPLVLQSDAPPPAEALLTRPPEHISGPALTSLGVSNSYGIARIPD
SIGELTALTSLSFVKCGRITSLPEFIGELTALTALSVQSCGQLRALPDSI
SSLTRLTALSLRHCQELTRLPDGIGDLTALMTLDLSDCSALNAIPETIGG
LCALTTLDLQKCYSLTCLPDSLGSLAALAALKLSSCQFRHLFGSIGNLAA
LTTLDLSSCRELQALPDTIGQLTALAELNLMACMTLAGLPLSIGKLCALT
QLTLSECEALVSLPESIGDLAALTALDLPQCCALVALPESIGGLAALTAL
DLNGCQALTPLPDSISSLTRLTALSLHECRELRHLPDGIGNLTALATLDL
SDCSALDGLPETVGSLCALTSLNLQKCYSLTCLPDSLGNLAALATLKLRS
CQSCHLPGSIGNLSAFTTLDLSSCRELEALPDTIGQLAALTELNIAACSS
LQRLPASIAALTQLHTLAALNLSGCPALTSQPSDIGRLRALTQLTLSECR
ALVSLLESIDGMRALTALDMRGCRALVALPESIGGLAALTALDLRGCRAL
TRLPQRVVELTALQRIDLRDECGVKGVPATFVHAPGTRYWERIYAAYATV
ARKRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf