Trimin1|163719|e_gw1.27.138.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|163719
Unique Name	Trimin1\|163719\|e_gw1.27.138.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	179

Homology

[Close]

BLAST of jgi.p|Trimin1|163719 vs. uniprot
Match: A0A835Z280_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z280_9STRA)

HSP 1 Score: 355 bits (911), Expect = 5.960e-124
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0

Query:    1 MGHNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLPFADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAMLLMMAGRIM 179
            MGHNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLPFADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAMLLMMAGRIM
Sbjct:    1 MGHNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLPFADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAMLLMMAGRIM 179

[Close]

BLAST of jgi.p|Trimin1|163719 vs. uniprot
Match: D7FH33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH33_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.260e-36
Identity = 78/180 (43.33%), Postives = 109/180 (60.56%), Query Frame = 0

Query:    3 HNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLP----FADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAMLLMMAGRI 178
            H+  TR+ R  WG++ IR ID+DDP  V+RA++ P    F D++  V+   YG YA+TQ M  H GDTALH+ALKW++ RA KA+L L   W I N  GVTAE ++++ + K M   K +QEREY   AM  E++ M  L+A EQ+ +     D L   +  RT G   EA +L+  GR+
Sbjct:    2 HSLWTRKTR-TWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNTQVEID-YGGYAWTQWMHRHFGDTALHIALKWKRYRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEEAMRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAILLEHGRV 179

[Close]

BLAST of jgi.p|Trimin1|163719 vs. uniprot
Match: A0A7S3M322_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M322_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.480e-9
Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 0

Query:   14 WGFDAIRAIDQDDPALVLRAYKLPFADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILM 105
            WG   ++AIDQDD   V    K    D+D  +    Y  Y +T +   + GDTALHLA++ +KM     LL L AR DI NA G+T   + M
Sbjct:   24 WGRALLQAIDQDDCIAVYECSKREGFDIDTQITILGYAQYLWTCQFHKYLGDTALHLAIRQKKMMCVHMLLLLKARTDIPNAAGITGNDLCM 115

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|163719 vs. uniprot

BLAST of jgi.p|Trimin1|163719 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z280_9STRA	5.960e-124	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
D7FH33_ECTSI	1.260e-36	43.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S3M322_9STRA	3.480e-9	40.22	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 38..133 e-value: 5.2E-7 score: 31.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 59..108
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 63..95 score: 8.95002

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_27	contig	Contig_27:146348..147421 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|163719	mRNA_6884	Tribonema minus UTEX_B_3156	mRNA	Contig_27 146348..147421 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|163719|e_gw1.27.138.1 ID=Trimin1|163719|e_gw1.27.138.1|Name=jgi.p|Trimin1|163719|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=179bp
MGHNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLPFADVDHVVQKHLY
GDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTA
EAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMS
ADKLRQLNELRTAGAAQEAMLLMMAGRIM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt