Trimin1|51957|CE51956_22836 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|51957
Unique NameTrimin1|51957|CE51956_22836
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length121
Homology
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A835YYK1_9STRA (Ribosomal protein S10 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYK1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.320e-77
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDSN 120
            MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDSN
Sbjct:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDSN 120          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: D7FM69_ECTSI (Ribosomal_S10 domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FM69_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.050e-62
Identity = 98/119 (82.35%), Postives = 110/119 (92.44%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
            MS++ K K +  EE+RVHRIRITLTS+NVKNLEKVCADLK GAV+ +LKVSGPVRLPT+KLKIVTRKSPCG GTNT+DRFEMRIHKRI+DLHSPSEIVK+ITSISIEPGVEVEVTI D+
Sbjct:    1 MSAYVKGKGLGQEEARVHRIRITLTSKNVKNLEKVCADLKKGAVEKKLKVSGPVRLPTKKLKIVTRKSPCGEGTNTWDRFEMRIHKRILDLHSPSEIVKEITSISIEPGVEVEVTIADA 119          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A397FH44_9STRA (Ribosomal_S10 domain-containing protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397FH44_9STRA)

HSP 1 Score: 189 bits (480), Expect = 7.540e-60
Identity = 97/116 (83.62%), Postives = 102/116 (87.93%), Query Frame = 0
Query:    5 TKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDSN 120
            TK      EESR+HRIRITLTSRNVKNLEKVCADLK GAV   LKVSGPVRLPT+ L++ TRKSPCG GTNT+DRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTI DSN
Sbjct:   25 TKPTGFEGEESRIHRIRITLTSRNVKNLEKVCADLKKGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIADSN 140          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: G4YYZ2_PHYSP (Ribosomal_S10 domain-containing protein n=7 Tax=Oomycota TaxID=4762 RepID=G4YYZ2_PHYSP)

HSP 1 Score: 186 bits (471), Expect = 9.320e-59
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
            MS   K K + +EE+R+HRIRITL+SRNVKNLEKVCADLK GAV   LKVSGPVRLPT+ L++ TRKSPCG GTNT+DRFEMRIHKRIIDLH+PS+IVKQITSISIEPGVEVEVTI DS
Sbjct:    1 MSLVNKPKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: H3GAS8_PHYRM (Ribosomal_S10 domain-containing protein n=9 Tax=Eukaryota TaxID=2759 RepID=H3GAS8_PHYRM)

HSP 1 Score: 186 bits (471), Expect = 9.320e-59
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
            MS   K K + +EE+R+HRIRITL+SRNVKNLEKVCADLK GAV   LKVSGPVRLPT+ L++ TRKSPCG GTNT+DRFEMRIHKRIIDLH+PS+IVKQITSISIEPGVEVEVTI DS
Sbjct:    1 MSLVNKQKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 119          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A329RI77_9STRA (Ribosomal_S10 domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RI77_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.010e-58
Identity = 95/119 (79.83%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
            MS   K K + +EE+R+HRIRITLTSRNVKNLEKVCADLK GAV   LKVSGPVRLPT+ L++ TRKSPCG GTNT+DRFEMRIHKRIIDLH+PS+IVKQITSISIEPGVEVEVTI DS
Sbjct:   47 MSLVNKPKTVEAEETRIHRIRITLTSRNVKNLEKVCADLKRGAVDKNLKVSGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 165          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A421F2P5_9STRA (Ribosomal_S10 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F2P5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.460e-57
Identity = 92/117 (78.63%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    3 SFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKDS 119
            S  K K + +EE+R+HRIRITL+SRNVKNLEKVCADLK GAV   LKV+GPVRLPT+ L++ TRKSPCG GTNT+DRFEMRIHKRIIDLH+PS+IVKQITSISIEPGVEVEVTI DS
Sbjct:   34 SLNKPKTVEAEETRIHRIRITLSSRNVKNLEKVCADLKRGAVDKNLKVAGPVRLPTKILRLTTRKSPCGEGTNTWDRFEMRIHKRIIDLHAPSDIVKQITSISIEPGVEVEVTIADS 150          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A6U5GMR1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5GMR1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.820e-54
Identity = 87/109 (79.82%), Postives = 98/109 (89.91%), Query Frame = 0
Query:   10 IASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKD 118
            I   +++VHRIRITLTSRNVKNLEKVCADLK GA+  +LKVSGPVRLPT+KL I TRK+P G GTNT+DRFEMRIHKR+IDLHSP+EIVKQITSISIEPGVEVEVT+ D
Sbjct:   14 IVEADAKVHRIRITLTSRNVKNLEKVCADLKRGALDKKLKVSGPVRLPTKKLTITTRKAPSGEGTNTWDRFEMRIHKRLIDLHSPAEIVKQITSISIEPGVEVEVTVAD 122          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A7S4RFK6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RFK6_9DINO)

HSP 1 Score: 174 bits (442), Expect = 4.930e-54
Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 0
Query:    8 KDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKD 118
            K + SEE R+HRIRITLTSRNVK+LEKVC+DL SGA + +L+V+GPVRLPTR L++  RKSPCG GTNTFDR+EMRIHKR+IDLHSPS++VKQITSISIEPGVEVEVTI D
Sbjct:   31 KSLESEEQRLHRIRITLTSRNVKSLEKVCSDLISGAREKELRVAGPVRLPTRTLRLCVRKSPCGEGTNTFDRWEMRIHKRLIDLHSPSDVVKQITSISIEPGVEVEVTIAD 141          
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Match: A0A7S4JMI3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JMI3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.150e-54
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 0
Query:    1 MSSFTKTKDIASEESR--VHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKVSGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQITSISIEPGVEVEVTIKD 118
            M+S+TK KD+  +E    VHRIRITLTSRNVKNLEKVCADLK GA+  +L V GPVRLPTRKLKI TRK+P G GTNT+DRFEMRIHKR+IDLH+PSE+VKQITSISIEPGVEV+VTI D
Sbjct:   76 MASYTK-KDVPMDEGAAVVHRIRITLTSRNVKNLEKVCADLKKGALDKKLDVRGPVRLPTRKLKITTRKAPSGEGTNTWDRFEMRIHKRLIDLHAPSEVVKQITSISIEPGVEVDVTIND 194          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|51957 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYK1_9STRA2.320e-77100.00Ribosomal protein S10 domain-containing protein n=... [more]
D7FM69_ECTSI1.050e-6282.35Ribosomal_S10 domain-containing protein n=3 Tax=Eu... [more]
A0A397FH44_9STRA7.540e-6083.62Ribosomal_S10 domain-containing protein n=8 Tax=Sa... [more]
G4YYZ2_PHYSP9.320e-5978.99Ribosomal_S10 domain-containing protein n=7 Tax=Oo... [more]
H3GAS8_PHYRM9.320e-5978.99Ribosomal_S10 domain-containing protein n=9 Tax=Eu... [more]
A0A329RI77_9STRA1.010e-5879.83Ribosomal_S10 domain-containing protein n=11 Tax=P... [more]
A0A421F2P5_9STRA1.460e-5778.63Ribosomal_S10 domain-containing protein n=3 Tax=Ph... [more]
A0A6U5GMR1_9STRA3.820e-5479.82Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4RFK6_9DINO4.930e-5477.48Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S4JMI3_9STRA9.150e-5476.67Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 76..90
score: 54.74
coord: 19..32
score: 41.21
coord: 54..69
score: 43.39
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 9..118
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 17..116
score: 18.735914
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 21..115
e-value: 2.2E-39
score: 146.8
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 21..115
e-value: 1.5E-27
score: 95.6
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 3..117
e-value: 1.0E-46
score: 159.7
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 19..116
IPR005729Ribosomal protein S10, eukaryotic/archaealTIGRFAMTIGR01046TIGR01046coord: 18..116
e-value: 2.8E-42
score: 141.1
NoneNo IPR availablePANTHERPTHR11700:SF840S RIBOSOMAL PROTEIN S20coord: 9..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_27contigContig_27:836149..837450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|51957mRNA_6972Tribonema minus UTEX_B_3156 mRNAContig_27 836074..837822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|51957|CE51956_22836 ID=Trimin1|51957|CE51956_22836|Name=jgi.p|Trimin1|51957|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=121bp
MSSFTKTKDIASEESRVHRIRITLTSRNVKNLEKVCADLKSGAVKHQLKV
SGPVRLPTRKLKIVTRKSPCGNGTNTFDRFEMRIHKRIIDLHSPSEIVKQ
ITSISIEPGVEVEVTIKDSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001848Ribosomal_S10
IPR027486Ribosomal_S10_dom
IPR036838Ribosomal_S10_dom_sf
IPR005729Ribosomal_S10_euk/arc