Trimin1|354533|estExt_Genemark1.C_Ctg_2650002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354533
Unique Name	Trimin1\|354533\|estExt_Genemark1.C_Ctg_2650002
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	253

Homology

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BLAST of jgi.p|Trimin1|354533 vs. uniprot
Match: A0A835YYB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB1_9STRA)

HSP 1 Score: 353 bits (906), Expect = 8.640e-121
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0

Query:    1 MGTRRCPTCHAAFHEAYCPACRASSLRGSAQGAAPGAALLPXXXXXXXXXXXXXXXXXXXXXXXXXRQRGGAVCAVEGVVALCDMQQXXXXXXXXXXXXXXXXXXXXXXXGVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 252
            MGTRRCPTCHAAFHEAYCPACRASSLRGSAQGAAPGAALLPXXXXXXXXXXXXXXXXXXXXXXXXXRQRGGAVCAVEGVVALCDMQQXXXXXXXXXXXXXXXXXXXXXXXGVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL
Sbjct:    1 MGTRRCPTCHAAFHEAYCPACRASSLRGSAQGAAPGAALLPXXXXXXXXXXXXXXXXXXXXXXXXXRQRGGAVCAVEGVVALCDMQQXXXXXXXXXXXXXXXXXXXXXXXGVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 252

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BLAST of jgi.p|Trimin1|354533 vs. uniprot
Match: A0A836CDG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.320e-80
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query:  111 GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 252
            GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL
Sbjct:   22 GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 163

[Close]

BLAST of jgi.p|Trimin1|354533 vs. uniprot
Match: A0A836CG80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG80_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.750e-75
Identity = 140/142 (98.59%), Postives = 140/142 (98.59%), Query Frame = 0

Query:  111 GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 252
            GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGG N SDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL
Sbjct:  264 GVRAWAPLLAVDEPALCASLLRSMTARFSLSAAXXXXXXXXXXDAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRPLSGGSGGGGNASDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHREAL 405

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354533 vs. uniprot

BLAST of jgi.p|Trimin1|354533 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YYB1_9STRA	8.640e-121	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CDG3_9STRA	1.320e-80	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CG80_9STRA	1.750e-75	98.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..239

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_265	contig	Contig_265:9089..10189 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354533	mRNA_18577	Tribonema minus UTEX_B_3156	mRNA	Contig_265 9089..10189 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354533|estExt_Genemark1.C_Ctg_2650002 ID=Trimin1|354533|estExt_Genemark1.C_Ctg_2650002|Name=jgi.p|Trimin1|354533|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MGTRRCPTCHAAFHEAYCPACRASSLRGSAQGAAPGAALLPPPPMMPPPR
MPLPAPPALILLRRAARQRGGAVCAVEGVVALCDMQQQRQRGTGGGGGSG
GDGSGTGGGSGVRAWAPLLAVDEPALCASLLRSMTARFSLSAAAAAAAAA
AAADAAERPIDSLPRTTGRDGAGHSVSSTAAADEVDAAASGPGEAVPRRP
LSGGSGGGDNTSDVRQQRVFAAPRRPPAPRRVEDRPGLAVRRCYKEAHRE
AL*