Trimin1|354524|estExt_Genemark1.C_Ctg_2630007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354524
Unique Name	Trimin1\|354524\|estExt_Genemark1.C_Ctg_2630007
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	163

Homology

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BLAST of jgi.p|Trimin1|354524 vs. uniprot
Match: A0A835YZY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY3_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.770e-96
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query:    1 MLAAGENFKAAXXXXXXXXXXXXXEWERVQKDSPYYLARRIDMLDSSVKDLGNRIDKQLTDLGNNVTDLRNDMDKLVFFVTILQSMAGGALAGVGITSMSDITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPTS 162
            MLAAGENFKAAXXXXXXXXXXXXXEWERVQKDSPYYLARRIDMLDSSVKDLGNRIDKQLTDLGNNVTDLRNDMDKLVFFVTILQSMAGGALAGVGITSMSDITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPTS
Sbjct:    1 MLAAGENFKAAXXXXXXXXXXXXXEWERVQKDSPYYLARRIDMLDSSVKDLGNRIDKQLTDLGNNVTDLRNDMDKLVFFVTILQSMAGGALAGVGITSMSDITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPTS 162

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BLAST of jgi.p|Trimin1|354524 vs. uniprot
Match: A0A836CFF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF7_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.940e-67
Identity = 140/209 (66.99%), Postives = 144/209 (68.90%), Query Frame = 0

Query:    4 AGENFKAAXXXXXXXXXXXXXEWERVQKDSPYYLARRIDMLDSSVKDLGNRIDK-----------QLTDLGNNVTDLRNDMDKL---VFFVTILQSMAGGALAGVGI------------------------------------TSMSDITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPTS 162
            AGENFKAA XXXXXXXXXXXXEWER QKD+PYYLA RIDMLDSSVKD+GNRIDK           Q TDLG NVTDL+NDMDKL   V FVT LQS A G L GVGI                                    +SMSDITQLFHKTP D TCTTEAAASDS RNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPP S
Sbjct:   23 AGENFKAATXXXXXXXXXXXXEWERAQKDNPYYLAHRIDMLDSSVKDMGNRIDKKVMXXXXXXXXQFTDLGYNVTDLKNDMDKLQPMVVFVTALQSFATGVLNGVGIMSVPACTHVVLHFAVMPPCFNHLVVGLARSAVETMRSSMSDITQLFHKTPSDVTCTTEAAASDSTRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPAS 231

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BLAST of jgi.p|Trimin1|354524 vs. uniprot
Match: A0A836CHG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG0_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.750e-28
Identity = 64/85 (75.29%), Postives = 69/85 (81.18%), Query Frame = 0

Query:   82 ILQSMAGGALAGVGI----TSMSDITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNSQSLQRVSFPPTS 162
            +LQ+     LA   +    +S+SDITQLFHKTP DATCTTEAAASDS RNEKKRRPSLPFVTPVAS LPRFNSQSLQRVSFPP S
Sbjct:  816 VLQAFLVAGLARSAVETMRSSISDITQLFHKTPSDATCTTEAAASDSTRNEKKRRPSLPFVTPVASTLPRFNSQSLQRVSFPPAS 900

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354524 vs. uniprot

BLAST of jgi.p|Trimin1|354524 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YZY3_9STRA	2.770e-96	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CFF7_9STRA	3.940e-67	66.99	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHG0_9STRA	3.750e-28	75.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_263	contig	Contig_263:73762..74781 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354524	mRNA_18501	Tribonema minus UTEX_B_3156	mRNA	Contig_263 73762..74781 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354524|estExt_Genemark1.C_Ctg_2630007 ID=Trimin1|354524|estExt_Genemark1.C_Ctg_2630007|Name=jgi.p|Trimin1|354524|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
MLAAGENFKAAKENFKAAGESSKAEWERVQKDSPYYLARRIDMLDSSVKD
LGNRIDKQLTDLGNNVTDLRNDMDKLVFFVTILQSMAGGALAGVGITSMS
DITQLFHKTPLDATCTTEAAASDSMRNEKKRRPSLPFVTPVASALPRFNS
QSLQRVSFPPTS*